RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 CHD9Q3L8U1 2897 aa21.62■■□□□ 1.05
COL9A2-205ENST00000461118 NEFLP07196 543 aa21.61■■□□□ 1.05
COL9A2-205ENST00000461118 FOSL2P15408 326 aa21.61■■□□□ 1.05
COL9A2-205ENST00000461118 RAG1P15918 1043 aa21.61■■□□□ 1.05
COL9A2-205ENST00000461118 IRX5P78411 483 aaPredicted RBP21.61■■□□□ 1.05
COL9A2-205ENST00000461118 FPGSQ05932 587 aa21.61■■□□□ 1.05
COL9A2-205ENST00000461118 SNRNP48Q6IEG0 339 aaKnown RBP21.61■■□□□ 1.05
COL9A2-205ENST00000461118 MAMDC4Q6UXC1 1216 aa21.61■■□□□ 1.05
COL9A2-205ENST00000461118 KCTD1Q719H9 257 aa21.61■■□□□ 1.05
COL9A2-205ENST00000461118 IQCA1Q86XH1 822 aa21.61■■□□□ 1.05
COL9A2-205ENST00000461118 ANKS1AQ92625 1134 aa21.61■■□□□ 1.05
COL9A2-205ENST00000461118 CTDP1Q9Y5B0 961 aaPredicted RBP21.61■■□□□ 1.05
COL9A2-205ENST00000461118 MYADML2A6NDP7 307 aa21.6■■□□□ 1.05
COL9A2-205ENST00000461118 B4E1Z4 1266 aa21.6■■□□□ 1.05
COL9A2-205ENST00000461118 ADCY6O43306 1168 aa21.6■■□□□ 1.05
COL9A2-205ENST00000461118 CYP21A2P08686 494 aa21.6■■□□□ 1.05
COL9A2-205ENST00000461118 GRIN2CQ14957 1233 aa21.6■■□□□ 1.05
COL9A2-205ENST00000461118 BTNL9Q6UXG8 535 aa21.6■■□□□ 1.05
COL9A2-205ENST00000461118 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.6■■□□□ 1.05
COL9A2-205ENST00000461118 SKAP1Q86WV1 359 aa21.6■■□□□ 1.05
COL9A2-205ENST00000461118 MSL3Q8N5Y2 521 aaKnown RBP21.6■■□□□ 1.05
COL9A2-205ENST00000461118 FGD4Q96M96 766 aa21.6■■□□□ 1.05
COL9A2-205ENST00000461118 TMEM39AQ9NV64 488 aa21.6■■□□□ 1.05
COL9A2-205ENST00000461118 TBX21Q9UL17 535 aa21.6■■□□□ 1.05
COL9A2-205ENST00000461118 SYNGAP1Q96PV0 1343 aa21.59■■□□□ 1.05
COL9A2-205ENST00000461118 SNHG28P0DPA3 235 aa21.59■■□□□ 1.05
COL9A2-205ENST00000461118 CPXCR1Q8N123 301 aa21.59■■□□□ 1.05
COL9A2-205ENST00000461118 ZSCAN10Q96SZ4 725 aaPredicted RBP21.59■■□□□ 1.05
COL9A2-205ENST00000461118 ZKSCAN3Q9BRR0 538 aa21.59■■□□□ 1.05
COL9A2-205ENST00000461118 RAVER2Q9HCJ3 691 aaKnown RBP21.59■■□□□ 1.05
COL9A2-205ENST00000461118 ISY1Q9ULR0 285 aaKnown RBP21.59■■□□□ 1.05
COL9A2-205ENST00000461118 CNPY2Q9Y2B0 182 aa21.59■■□□□ 1.05
COL9A2-205ENST00000461118 LRRC37A2A6NM11 1700 aa21.58■■□□□ 1.05
COL9A2-205ENST00000461118 PDHBP11177 359 aa21.58■■□□□ 1.05
COL9A2-205ENST00000461118 CDK7P50613 346 aa21.58■■□□□ 1.05
COL9A2-205ENST00000461118 IKQ13123 557 aaPredicted RBP21.58■■□□□ 1.05
COL9A2-205ENST00000461118 KCNA10Q16322 511 aa21.58■■□□□ 1.05
COL9A2-205ENST00000461118 C16orf59Q7L2K0 433 aa21.58■■□□□ 1.05
COL9A2-205ENST00000461118 RASGRP2Q7LDG7 609 aa21.58■■□□□ 1.05
COL9A2-205ENST00000461118 USP38Q8NB14 1042 aa21.58■■□□□ 1.05
COL9A2-205ENST00000461118 STARD7Q9NQZ5 370 aa21.58■■□□□ 1.05
COL9A2-205ENST00000461118 PRR12Q9ULL5 1215 aa21.58■■□□□ 1.05
COL9A2-205ENST00000461118 ZNF536O15090 1300 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 MYO9BQ13459 2157 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 MOXD2PA6NHM9 499 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 TIMP1P01033 207 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 DNAJB2P25686 324 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 CST5P28325 142 aaPredicted RBP21.57■■□□□ 1.04
COL9A2-205ENST00000461118 CCDC96Q2M329 555 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 ENAHQ8N8S7 591 aaPredicted RBP21.57■■□□□ 1.04
COL9A2-205ENST00000461118 CHST13Q8NET6 341 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 CHMP4CQ96CF2 233 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.57■■□□□ 1.041e-6■□□□□ 8.5
COL9A2-205ENST00000461118 ESYT1Q9BSJ8 1104 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 FBXO40Q9UH90 709 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 FAM184BQ9ULE4 1060 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 MTMR7Q9Y216 660 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 LCTP09848 1927 aa21.57■■□□□ 1.04
COL9A2-205ENST00000461118 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.56■■□□□ 1.04
COL9A2-205ENST00000461118 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.56■■□□□ 1.04
COL9A2-205ENST00000461118 DUSP11O75319 330 aaKnown RBP21.56■■□□□ 1.04
COL9A2-205ENST00000461118 ZNF543Q08ER8 600 aa21.56■■□□□ 1.04
COL9A2-205ENST00000461118 TRDNQ13061 729 aa21.56■■□□□ 1.04
COL9A2-205ENST00000461118 RASIP1Q5U651 963 aa21.56■■□□□ 1.04
COL9A2-205ENST00000461118 TTBK2Q6IQ55 1244 aa21.56■■□□□ 1.04
COL9A2-205ENST00000461118 KIAA1211Q6ZU35 1233 aa21.56■■□□□ 1.04
COL9A2-205ENST00000461118 ZNF467Q7Z7K2 595 aaPredicted RBP21.56■■□□□ 1.04
COL9A2-205ENST00000461118 NUP133Q8WUM0 1156 aa21.56■■□□□ 1.04
COL9A2-205ENST00000461118 DCDC2CA8MYV0 355 aa21.55■■□□□ 1.04
COL9A2-205ENST00000461118 CTAGE5O15320 804 aa21.55■■□□□ 1.04
COL9A2-205ENST00000461118 TKFCQ3LXA3 575 aa21.55■■□□□ 1.04
COL9A2-205ENST00000461118 ERICH6BQ5W0A0 696 aa21.55■■□□□ 1.04
COL9A2-205ENST00000461118 PNMA1Q8ND90 353 aa21.55■■□□□ 1.04
COL9A2-205ENST00000461118 KATNBL1Q9H079 304 aa21.55■■□□□ 1.04
COL9A2-205ENST00000461118 LSG1Q9H089 658 aaKnown RBP21.55■■□□□ 1.04
COL9A2-205ENST00000461118 UPF3AQ9H1J1 476 aaKnown RBP21.55■■□□□ 1.04
COL9A2-205ENST00000461118 KAT14Q9H8E8 782 aa21.55■■□□□ 1.04
COL9A2-205ENST00000461118 ZHX1Q9UKY1 873 aaPredicted RBP21.55■■□□□ 1.04
COL9A2-205ENST00000461118 ELP1O95163 1332 aa21.55■■□□□ 1.04
COL9A2-205ENST00000461118 TNKSO95271 1327 aa21.55■■□□□ 1.04
COL9A2-205ENST00000461118 E7EWF7 191 aa21.54■■□□□ 1.04
COL9A2-205ENST00000461118 ACVR2BQ13705 512 aa21.54■■□□□ 1.04
COL9A2-205ENST00000461118 GPATCH4Q5T3I0 446 aaKnown RBP21.54■■□□□ 1.04
COL9A2-205ENST00000461118 SYDE2Q5VT97 1194 aa21.54■■□□□ 1.04
COL9A2-205ENST00000461118 MFSD5Q6N075 450 aa21.54■■□□□ 1.04
COL9A2-205ENST00000461118 DDX11Q96FC9 970 aa21.54■■□□□ 1.04
COL9A2-205ENST00000461118 AGBL1Q96MI9 1066 aa21.54■■□□□ 1.04
COL9A2-205ENST00000461118 UBAC1Q9BSL1 405 aa21.54■■□□□ 1.04
COL9A2-205ENST00000461118 RANBP17Q9H2T7 1088 aaKnown RBP21.54■■□□□ 1.04
COL9A2-205ENST00000461118 ZNF576Q9H609 170 aa21.54■■□□□ 1.04
COL9A2-205ENST00000461118 GPCPD1Q9NPB8 672 aa21.54■■□□□ 1.04
COL9A2-205ENST00000461118 PRDM6Q9NQX0 595 aa21.54■■□□□ 1.04
COL9A2-205ENST00000461118 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.54■■□□□ 1.04
COL9A2-205ENST00000461118 RBM8AQ9Y5S9 174 aaKnown RBP21.54■■□□□ 1.04
COL9A2-205ENST00000461118 FRMPD2Q68DX3 1309 aaPredicted RBP21.54■■□□□ 1.04
COL9A2-205ENST00000461118 REV3LO60673 3130 aa21.53■■□□□ 1.04
COL9A2-205ENST00000461118 CENPBP07199 599 aaPredicted RBP21.53■■□□□ 1.04
COL9A2-205ENST00000461118 ASGR1P07306 291 aa21.53■■□□□ 1.04
COL9A2-205ENST00000461118 SLC16A2P36021 539 aa21.53■■□□□ 1.04
COL9A2-205ENST00000461118 SLC4A3P48751 1232 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms