RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 NACAP1Q9BZK3 213 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 MSRAQ9UJ68 235 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 GREB1LQ9C091 1923 aaPredicted RBP17.33■□□□□ 0.37
NCK1-202ENST00000460960 MYH4Q9Y623 1939 aa17.33■□□□□ 0.37
NCK1-202ENST00000460960 DNAJC25-GNG10A0A024R161 153 aa17.33■□□□□ 0.36
NCK1-202ENST00000460960 ARVCFO00192 962 aa17.33■□□□□ 0.36
NCK1-202ENST00000460960 ADCY6O43306 1168 aa17.33■□□□□ 0.36
NCK1-202ENST00000460960 CST5P28325 142 aaPredicted RBP17.33■□□□□ 0.36
NCK1-202ENST00000460960 CYP2C18P33260 490 aa17.33■□□□□ 0.36
NCK1-202ENST00000460960 C16orf59Q7L2K0 433 aa17.33■□□□□ 0.36
NCK1-202ENST00000460960 ARMCX2Q7L311 632 aa17.33■□□□□ 0.36
NCK1-202ENST00000460960 ABHD16BQ9H3Z7 469 aa17.33■□□□□ 0.36
NCK1-202ENST00000460960 THEGQ9P2T0 379 aa17.33■□□□□ 0.36
NCK1-202ENST00000460960 CLIP2Q9UDT6 1046 aa17.33■□□□□ 0.36
NCK1-202ENST00000460960 TAF6LQ9Y6J9 622 aa17.33■□□□□ 0.36
NCK1-202ENST00000460960 RASA1P20936 1047 aa17.32■□□□□ 0.36
NCK1-202ENST00000460960 CDK7P50613 346 aa17.32■□□□□ 0.36
NCK1-202ENST00000460960 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
NCK1-202ENST00000460960 BEX3Q00994 111 aa17.32■□□□□ 0.36
NCK1-202ENST00000460960 ZNF467Q7Z7K2 595 aaPredicted RBP17.32■□□□□ 0.36
NCK1-202ENST00000460960 TBC1D10CQ8IV04 446 aa17.32■□□□□ 0.36
NCK1-202ENST00000460960 RUFY2Q8WXA3 655 aa17.32■□□□□ 0.36
NCK1-202ENST00000460960 DSCC1Q9BVC3 393 aa17.32■□□□□ 0.36
NCK1-202ENST00000460960 LSG1Q9H089 658 aaKnown RBP17.32■□□□□ 0.36
NCK1-202ENST00000460960 MTIF3Q9H2K0 278 aaKnown RBP17.32■□□□□ 0.36
NCK1-202ENST00000460960 NYAP2Q9P242 653 aa17.32■□□□□ 0.36
NCK1-202ENST00000460960 ZMYM6O95789 1325 aa17.31■□□□□ 0.36
NCK1-202ENST00000460960 GJA9P57773 515 aa17.31■□□□□ 0.36
NCK1-202ENST00000460960 RAB30Q15771 203 aa17.31■□□□□ 0.36
NCK1-202ENST00000460960 FAM126BQ8IXS8 530 aa17.31■□□□□ 0.36
NCK1-202ENST00000460960 CCDC144CPQ8IYA2 1237 aa17.31■□□□□ 0.36
NCK1-202ENST00000460960 LRRC47Q8N1G4 583 aaKnown RBP17.31■□□□□ 0.36
NCK1-202ENST00000460960 MICALL1Q8N3F8 863 aa17.31■□□□□ 0.36
NCK1-202ENST00000460960 CHMP4CQ96CF2 233 aa17.31■□□□□ 0.36
NCK1-202ENST00000460960 UPF3AQ9H1J1 476 aaKnown RBP17.31■□□□□ 0.36
NCK1-202ENST00000460960 NKX2-4Q9H2Z4 354 aa17.31■□□□□ 0.36
NCK1-202ENST00000460960 FBXO40Q9UH90 709 aa17.31■□□□□ 0.36
NCK1-202ENST00000460960 RAPGEFL1Q9UHV5 662 aa17.31■□□□□ 0.36
NCK1-202ENST00000460960 AKNAD1Q5T1N1 836 aa17.3■□□□□ 0.36
NCK1-202ENST00000460960 ADAMTS19Q8TE59 1207 aa17.3■□□□□ 0.36
NCK1-202ENST00000460960 ATXN2LQ8WWM7 1075 aaKnown RBP17.3■□□□□ 0.36
NCK1-202ENST00000460960 IL23AQ9NPF7 189 aa17.3■□□□□ 0.36
NCK1-202ENST00000460960 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
NCK1-202ENST00000460960 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.3■□□□□ 0.36
NCK1-202ENST00000460960 GBF1Q92538 1859 aa17.3■□□□□ 0.36
NCK1-202ENST00000460960 ATP2A1O14983 1001 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 MRPS5P82675 430 aaKnown RBP17.29■□□□□ 0.36
NCK1-202ENST00000460960 CNTN2Q02246 1040 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 TNFAIP2Q03169 654 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 IKQ13123 557 aaPredicted RBP17.29■□□□□ 0.36
NCK1-202ENST00000460960 ADGRE1Q14246 886 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 RASIP1Q5U651 963 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 CXCL17Q6UXB2 119 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 OTOP2Q7RTS6 562 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 ZNF444Q8N0Y2 327 aaPredicted RBP17.29■□□□□ 0.36
NCK1-202ENST00000460960 CHST13Q8NET6 341 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 FGD4Q96M96 766 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 ASB2Q96Q27 587 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 HIPK3Q9H422 1215 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 SLC28A3Q9HAS3 691 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 SLC38A10Q9HBR0 1119 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 CXXC1Q9P0U4 656 aaPredicted RBP17.29■□□□□ 0.36
NCK1-202ENST00000460960 FEM1BQ9UK73 627 aa17.29■□□□□ 0.36
NCK1-202ENST00000460960 NEDD4P46934 1319 aa17.28■□□□□ 0.36
NCK1-202ENST00000460960 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.28■□□□□ 0.36
NCK1-202ENST00000460960 FGBP02675 491 aa17.28■□□□□ 0.36
NCK1-202ENST00000460960 CCL23P55773 120 aa17.28■□□□□ 0.36
NCK1-202ENST00000460960 HERVK_113Q902F9 699 aa17.28■□□□□ 0.36
NCK1-202ENST00000460960 MAP4K1Q92918 833 aa17.28■□□□□ 0.36
NCK1-202ENST00000460960 CEP95Q96GE4 821 aa17.28■□□□□ 0.36
NCK1-202ENST00000460960 UHRF1Q96T88 793 aaPredicted RBP17.28■□□□□ 0.36
NCK1-202ENST00000460960 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
NCK1-202ENST00000460960 RBM8AQ9Y5S9 174 aaKnown RBP17.28■□□□□ 0.36
NCK1-202ENST00000460960 UMODL1Q5DID0 1318 aa17.27■□□□□ 0.36
NCK1-202ENST00000460960 COL9A3Q14050 684 aaPredicted RBP17.27■□□□□ 0.36
NCK1-202ENST00000460960 SLFN13Q68D06 897 aa17.27■□□□□ 0.36
NCK1-202ENST00000460960 TLK2Q86UE8 772 aa17.27■□□□□ 0.36
NCK1-202ENST00000460960 AP5M1Q9H0R1 490 aa17.27■□□□□ 0.36
NCK1-202ENST00000460960 ACAD9Q9H845 621 aa17.27■□□□□ 0.36
NCK1-202ENST00000460960 YBX2Q9Y2T7 364 aaKnown RBP17.27■□□□□ 0.36
NCK1-202ENST00000460960 ZBBXA8MT70 800 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 CTAGE5O15320 804 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 TTLL1O95922 423 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 CD4P01730 458 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 CYP21A2P08686 494 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 FGRP09769 529 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 BMP3P12645 472 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 PTGS1P23219 599 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 RABGGTBP53611 331 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 ITGA7Q13683 1181 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 FSCN1Q16658 493 aaKnown RBP17.26■□□□□ 0.35
NCK1-202ENST00000460960 TSPYL2Q9H2G4 693 aaPredicted RBP17.26■□□□□ 0.35
NCK1-202ENST00000460960 ZNF287Q9HBT7 754 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 RNF146Q9NTX7 359 aa17.26■□□□□ 0.35
NCK1-202ENST00000460960 ASTN1O14525 1302 aa17.25■□□□□ 0.35
NCK1-202ENST00000460960 TMEM232C9JQI7 657 aa17.25■□□□□ 0.35
NCK1-202ENST00000460960 ZNF213O14771 459 aa17.25■□□□□ 0.35
NCK1-202ENST00000460960 DYNC1LI2O43237 492 aaPredicted RBP17.25■□□□□ 0.35
NCK1-202ENST00000460960 ZEB2O60315 1214 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms