RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 FLOT1O75955 427 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 CYP2D6P10635 497 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 GPBP1Q86WP2 473 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 OTUD6BQ8N6M0 293 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 GOLGA5Q8TBA6 731 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 HPSEQ9Y251 543 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 MRFAP1Q9Y605 127 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 ZNF335Q9H4Z2 1342 aaPredicted RBP13.35□□□□□ -0.27
CPNE6-202ENST00000460657 USP17L3A6NCW0 530 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 USP17L4A6NCW7 530 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 PRDX5P30044 214 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 MAN2A1Q16706 1144 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 TTC31Q49AM3 519 aaPredicted RBP13.35□□□□□ -0.27
CPNE6-202ENST00000460657 USP17L1Q7RTZ2 530 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 USP37Q86T82 979 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 WDR24Q96S15 920 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 PANK4Q9NVE7 773 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 SALL1Q9NSC2 1324 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 LGALS16A8MUM7 142 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 ORC4O43929 436 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 DPP8Q6V1X1 898 aaPredicted RBP13.35□□□□□ -0.27
CPNE6-202ENST00000460657 PHF20Q9BVI0 1012 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 DDX25Q9UHL0 483 aaKnown RBP13.35□□□□□ -0.27
CPNE6-202ENST00000460657 PEAK1Q9H792 1746 aa13.35□□□□□ -0.27
CPNE6-202ENST00000460657 hCG_1984214I3L0E3 225 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 NMT2O60551 498 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 ASPRV1Q53RT3 343 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 ZNF713Q8N859 430 aaPredicted RBP13.34□□□□□ -0.27
CPNE6-202ENST00000460657 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 UIMC1Q96RL1 719 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 THRAP3Q9Y2W1 955 aaKnown RBP13.34□□□□□ -0.27
CPNE6-202ENST00000460657 NDUFAB1O14561 156 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 CEP104O60308 925 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 PRCPP42785 496 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
CPNE6-202ENST00000460657 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 DIXDC1Q155Q3 683 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 LRRC45Q96CN5 670 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 NHEJ1Q9H9Q4 299 aaPredicted RBP13.34□□□□□ -0.27
CPNE6-202ENST00000460657 FAM205CA6NFA0 338 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 UBAP1LF5GYI3 381 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 PIGSQ96S52 555 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 NAP1L3Q99457 506 aaPredicted RBP13.34□□□□□ -0.27
CPNE6-202ENST00000460657 RIC8AQ9NPQ8 531 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 PODXL2Q9NZ53 605 aa13.34□□□□□ -0.27
CPNE6-202ENST00000460657 NR1I3Q14994 352 aa13.33□□□□□ -0.27
CPNE6-202ENST00000460657 USP49Q70CQ1 688 aa13.33□□□□□ -0.27
CPNE6-202ENST00000460657 B4GALNT4Q76KP1 1039 aa13.33□□□□□ -0.27
CPNE6-202ENST00000460657 KLHL7Q8IXQ5 586 aa13.33□□□□□ -0.27
CPNE6-202ENST00000460657 TC2NQ8N9U0 490 aa13.33□□□□□ -0.27
CPNE6-202ENST00000460657 CELF1Q92879 486 aaKnown RBP13.33□□□□□ -0.27
CPNE6-202ENST00000460657 ABCB6Q9NP58 842 aa13.33□□□□□ -0.27
CPNE6-202ENST00000460657 POLR2FP61218 127 aaKnown RBP13.33□□□□□ -0.28
CPNE6-202ENST00000460657 USP17L2Q6R6M4 530 aa13.33□□□□□ -0.28
CPNE6-202ENST00000460657 ILDR1Q86SU0 546 aaPredicted RBP13.33□□□□□ -0.28
CPNE6-202ENST00000460657 ANKRD13CQ8N6S4 541 aa13.33□□□□□ -0.28
CPNE6-202ENST00000460657 UBLCP1Q8WVY7 318 aaPredicted RBP13.33□□□□□ -0.28
CPNE6-202ENST00000460657 FAM84BQ96KN1 310 aaPredicted RBP13.33□□□□□ -0.28
CPNE6-202ENST00000460657 MAP3K14Q99558 947 aa13.33□□□□□ -0.28
CPNE6-202ENST00000460657 L2HGDHQ9H9P8 463 aa13.33□□□□□ -0.28
CPNE6-202ENST00000460657 BUB1O43683 1085 aa13.33□□□□□ -0.28
CPNE6-202ENST00000460657 MNAT1P51948 309 aa13.33□□□□□ -0.28
CPNE6-202ENST00000460657 MTF1Q14872 753 aa13.33□□□□□ -0.28
CPNE6-202ENST00000460657 FNBP4Q8N3X1 1017 aaPredicted RBP13.33□□□□□ -0.28
CPNE6-202ENST00000460657 ARMCX3Q9UH62 379 aaPredicted RBP13.33□□□□□ -0.28
CPNE6-202ENST00000460657 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 ACTN4O43707 911 aaKnown RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 TNFAIP3P21580 790 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 GBP2P32456 591 aaPredicted RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 COL9A3Q14050 684 aaPredicted RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 CASP8Q14790 479 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 MCTP2Q6DN12 878 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 MRPL44Q9H9J2 332 aaKnown RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 GCNT3O95395 438 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 XRCC5P13010 732 aaKnown RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 HOXA7P31268 230 aaPredicted RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 FAN1Q9Y2M0 1017 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 KCNQ4P56696 695 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 FKBP3Q00688 224 aaKnown RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 SRBD1Q8N5C6 995 aaKnown RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 ADD3Q9UEY8 706 aaKnown RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 HDAC9Q9UKV0 1011 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 JRKLQ9Y4A0 524 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 TMEM110-MUSTN1A8MSY1 372 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 CHMP2AO43633 222 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 DPYDQ12882 1025 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 SEMA3FQ13275 785 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 GPATCH4Q5T3I0 446 aaKnown RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 PEX26Q7Z412 305 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 SLFN12Q8IYM2 578 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 SYCE1Q8N0S2 351 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 STMN4Q9H169 189 aaPredicted RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 EPC1Q9H2F5 836 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 FAM204AQ9H8W3 233 aa13.32□□□□□ -0.28
CPNE6-202ENST00000460657 MTRF1LQ9UGC7 380 aaKnown RBP13.32□□□□□ -0.28
CPNE6-202ENST00000460657 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 CYP27A1Q02318 531 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 GRIN1Q05586 938 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 ADAM9Q13443 819 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms