RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 BRMS1Q9HCU9 246 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 FBXO28Q9NVF7 368 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 MORF4L1Q9UBU8 362 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 CCPG1Q9ULG6 757 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 V9GY48 417 aaPredicted RBP12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 GREB1LQ9C091 1923 aaPredicted RBP12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 B4DLN1 442 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 SNPHO15079 494 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 STRNO43815 780 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 TRPA1O75762 1119 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 GNRH1P01148 92 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 HOXD10P28358 340 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 GNA11P29992 359 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 MRPL12P52815 198 aaKnown RBP12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 ERVK-9P63128 1117 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 ERVK-24P63145 666 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 CRHR2Q13324 411 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 GALNT17Q6IS24 598 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 CCDC83Q8IWF9 413 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 CPXCR1Q8N123 301 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 RGS22Q8NE09 1264 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 CUL5Q93034 780 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 LARP6Q9BRS8 491 aaKnown RBP12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 SPATC1LQ9H0A9 340 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 SH3GLB2Q9NR46 395 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 RNF186Q9NXI6 227 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 PCDHA1Q9Y5I3 950 aa12.71□□□□□ -0.37
SMNDC1-203ENST00000460483 MYH8P13535 1937 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 PLEKHA8P1O95397 391 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 SCG2P13521 617 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 CALML3P27482 149 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 CDC27P30260 824 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 DGKZQ13574 1117 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 COL9A3Q14050 684 aaPredicted RBP12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 SAFBQ15424 915 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 PFKFB3Q16875 520 aaPredicted RBP12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 SNRNP48Q6IEG0 339 aaKnown RBP12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 RAB11FIP4Q86YS3 637 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 RIOX2Q8IUF8 465 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 ANKRD13CQ8N6S4 541 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 PDCD7Q8N8D1 485 aaKnown RBP12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 NECAB1Q8N987 351 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 MTMR8Q96EF0 704 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 PIGSQ96S52 555 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 ACAD9Q9H845 621 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 NCOA5Q9HCD5 579 aaKnown RBP12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 C6orf50Q9HD87 102 aa12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 ORC3Q9UBD5 711 aaPredicted RBP12.7□□□□□ -0.38
SMNDC1-203ENST00000460483 PFASO15067 1338 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 PTPDC1A2A3K4 754 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 FCGRTP55899 365 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 SP3Q02447 781 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 CUL4AQ13619 759 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 KCTD2Q14681 263 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 NTRK3Q16288 839 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 QRICH1Q2TAL8 776 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 CCDC174Q6PII3 467 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 C17orf99Q6UX52 265 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 NCAPG2Q86XI2 1143 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 ABRAQ8N0Z2 381 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 DNAJC5GQ8N7S2 189 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 COA7Q96BR5 231 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 ERO1AQ96HE7 468 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 EHMT1Q9H9B1 1298 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 RAVER2Q9HCJ3 691 aaKnown RBP12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 FAM217BQ9NTX9 383 aaPredicted RBP12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 BARHL2Q9NY43 387 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 RBPJLQ9UBG7 517 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 OTOFQ9HC10 1997 aa12.69□□□□□ -0.38
SMNDC1-203ENST00000460483 CNTNAP5Q8WYK1 1306 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 BCRP11274 1271 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 FCER1AP12319 257 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 ALAS1P13196 640 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 SLC4A3P48751 1232 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 NAPAP54920 295 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 TMEM132BQ14DG7 1078 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 ANKRD35Q8N283 1001 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 JMYQ8N9B5 988 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 SOCS4Q8WXH5 440 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 PHKBQ93100 1093 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 DDX11Q96FC9 970 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 TRERF1Q96PN7 1200 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 ZIC5Q96T25 663 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 WBP1LQ9NX94 342 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 CPA4Q9UI42 421 aa12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 ZNF214Q9UL59 606 aaPredicted RBP12.68□□□□□ -0.38
SMNDC1-203ENST00000460483 ATAD5Q96QE3 1844 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 H3BQV1 296 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 CYTH3O43739 400 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 FKTNO75072 461 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 FOSP01100 380 aaPredicted RBP12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 PRMT2P55345 433 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 NLRP5P59047 1200 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 FUT2Q10981 343 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 PDAP1Q13442 181 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms