RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 DSG3P32926 999 aa11.21□□□□□ -0.61
EPB41-208ENST00000460378 HIRAP54198 1017 aaPredicted RBP11.21□□□□□ -0.61
EPB41-208ENST00000460378 ATG9AQ7Z3C6 839 aa11.21□□□□□ -0.61
EPB41-208ENST00000460378 USP37Q86T82 979 aa11.21□□□□□ -0.61
EPB41-208ENST00000460378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.21□□□□□ -0.615e-37■□□□□ 10.6
EPB41-208ENST00000460378 SLC45A1Q9Y2W3 748 aa11.21□□□□□ -0.61
EPB41-208ENST00000460378 BTAF1O14981 1849 aa11.21□□□□□ -0.61
EPB41-208ENST00000460378 ASTN2O75129 1339 aaPredicted RBP11.21□□□□□ -0.61
EPB41-208ENST00000460378 TNKSO95271 1327 aa11.21□□□□□ -0.61
EPB41-208ENST00000460378 PDS5AQ29RF7 1337 aaKnown RBP11.21□□□□□ -0.61
EPB41-208ENST00000460378 CYP2D7A0A087X1C5 515 aa11.21□□□□□ -0.61
EPB41-208ENST00000460378 CHRDL2Q6WN34 429 aa11.21□□□□□ -0.61
EPB41-208ENST00000460378 EXOC4Q96A65 974 aa11.21□□□□□ -0.61
EPB41-208ENST00000460378 AK9Q5TCS8 1911 aa11.21□□□□□ -0.61
EPB41-208ENST00000460378 ARHGEF37A1IGU5 675 aa11.21□□□□□ -0.62
EPB41-208ENST00000460378 FGBP02675 491 aa11.21□□□□□ -0.62
EPB41-208ENST00000460378 TM4SF4P48230 202 aa11.21□□□□□ -0.62
EPB41-208ENST00000460378 LAMC2Q13753 1193 aa11.21□□□□□ -0.62
EPB41-208ENST00000460378 TTC22Q5TAA0 569 aa11.21□□□□□ -0.62
EPB41-208ENST00000460378 COL13A1Q5TAT6 717 aaPredicted RBP11.21□□□□□ -0.62
EPB41-208ENST00000460378 REXO1Q8N1G1 1221 aaKnown RBP11.21□□□□□ -0.62
EPB41-208ENST00000460378 NLRP7Q8WX94 980 aa11.21□□□□□ -0.62
EPB41-208ENST00000460378 PCMTD1Q96MG8 357 aaPredicted RBP11.21□□□□□ -0.62
EPB41-208ENST00000460378 FAM212AQ96EL1 285 aa11.21□□□□□ -0.62
EPB41-208ENST00000460378 DDX20Q9UHI6 824 aaKnown RBP11.21□□□□□ -0.62
EPB41-208ENST00000460378 UBA7P41226 1012 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 NOP2P46087 812 aaKnown RBP11.2□□□□□ -0.62
EPB41-208ENST00000460378 CERS5Q8N5B7 392 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 BRF1Q92994 677 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 MFSD1Q9H3U5 465 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 NHSQ6T4R5 1651 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 EFCAB14O75071 495 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 NDUFB10O96000 172 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 STIM1Q13586 685 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 C12orf60Q5U649 245 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 KRT79Q5XKE5 535 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 PSRC1Q6PGN9 363 aaPredicted RBP11.2□□□□□ -0.62
EPB41-208ENST00000460378 KRT25Q7Z3Z0 450 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 ELMOD1Q8N336 334 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 NEDD1Q8NHV4 660 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 XIRP1Q702N8 1843 aaKnown RBP11.2□□□□□ -0.62
EPB41-208ENST00000460378 CRYBG1Q9Y4K1 1723 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 ARHGEF35A5YM69 484 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 M0R2C6 588 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 DDAH1O94760 285 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 SYN1P17600 705 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 BAATQ14032 418 aaPredicted RBP11.2□□□□□ -0.62
EPB41-208ENST00000460378 ZNF512BQ96KM6 892 aaPredicted RBP11.2□□□□□ -0.62
EPB41-208ENST00000460378 NBPF20Q3BBV1 942 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 CEP95Q96GE4 821 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 GCNAQ96QF7 691 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 TINF2Q9BSI4 451 aa11.2□□□□□ -0.62
EPB41-208ENST00000460378 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
EPB41-208ENST00000460378 PSAPP07602 524 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 FPGSQ05932 587 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 TBC1D8BQ0IIM8 1120 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 FOXD4L5Q5VV16 416 aaPredicted RBP11.19□□□□□ -0.62
EPB41-208ENST00000460378 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 CCDC73Q6ZRK6 1079 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 DGKHQ86XP1 1220 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 FAM43AQ8N2R8 423 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 FOXD4L4Q8WXT5 416 aaPredicted RBP11.19□□□□□ -0.62
EPB41-208ENST00000460378 FAM163AQ96GL9 167 aaPredicted RBP11.19□□□□□ -0.62
EPB41-208ENST00000460378 WDR11Q9BZH6 1224 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 THSD7AQ9UPZ6 1657 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 PRPF38BQ5VTL8 546 aaKnown RBP11.19□□□□□ -0.62
EPB41-208ENST00000460378 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.19□□□□□ -0.62
EPB41-208ENST00000460378 DHX32Q7L7V1 743 aaKnown RBP11.19□□□□□ -0.62
EPB41-208ENST00000460378 KCNG4Q8TDN1 519 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 TLR7Q9NYK1 1049 aaKnown RBP11.19□□□□□ -0.62
EPB41-208ENST00000460378 PPP1R9AQ9ULJ8 1098 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
EPB41-208ENST00000460378 PGK2P07205 417 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 PTPREP23469 700 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 ARHGAP4P98171 946 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 SYCP1Q15431 976 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
EPB41-208ENST00000460378 POLGP54098 1239 aaPredicted RBP11.19□□□□□ -0.62
EPB41-208ENST00000460378 IKBKEQ14164 716 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 HAUS3Q68CZ6 603 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 DEPTORQ8TB45 409 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 SLC7A3Q8WY07 619 aa11.19□□□□□ -0.62
EPB41-208ENST00000460378 XPOTO43592 962 aaKnown RBP11.18□□□□□ -0.62
EPB41-208ENST00000460378 PHACTR2O75167 634 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 SNAP25P60880 206 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 AMPD3Q01432 767 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 ZMYM1Q5SVZ6 1142 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 STRBPQ96SI9 672 aaKnown RBP11.18□□□□□ -0.62
EPB41-208ENST00000460378 C17orf102A2RUQ5 167 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 DPP7Q9UHL4 492 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 TNNQ9UQP3 1299 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 NUB1Q9Y5A7 615 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 hCG_1984214I3L0E3 225 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 HOXA2O43364 376 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 MARK3P27448 753 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 ACVR2BQ13705 512 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 LETM2Q2VYF4 491 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 ZNF713Q8N859 430 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms