RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 MAD2L2Q9UI95 211 aa17.23■□□□□ 0.35
LMNB1-203ENST00000460265 SERPINB13Q9UIV8 391 aa17.23■□□□□ 0.35
LMNB1-203ENST00000460265 GUCA1BQ9UMX6 200 aa17.23■□□□□ 0.35
LMNB1-203ENST00000460265 FLT1P17948 1338 aa17.23■□□□□ 0.35
LMNB1-203ENST00000460265 CYTH3O43739 400 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 PRCPP42785 496 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 MDM2Q00987 491 aaPredicted RBP17.22■□□□□ 0.35
LMNB1-203ENST00000460265 GRM4Q14833 912 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 TXNRD1Q16881 649 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 USH1GQ495M9 461 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 CC2D1AQ6P1N0 951 aaPredicted RBP17.22■□□□□ 0.35
LMNB1-203ENST00000460265 PCDHA6Q9UN73 950 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 PCDHA8Q9Y5H6 950 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 OR52Z1P0C646 297 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 LONP1P36776 959 aaKnown RBP17.22■□□□□ 0.35
LMNB1-203ENST00000460265 TRAPPC10P48553 1259 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 KRT25Q7Z3Z0 450 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 KIAA1328Q86T90 577 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 PLCG1P19174 1290 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 CALCRLQ16602 461 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
LMNB1-203ENST00000460265 NOC3LQ8WTT2 800 aaKnown RBP17.22■□□□□ 0.35
LMNB1-203ENST00000460265 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
LMNB1-203ENST00000460265 ZNF76P36508 570 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 CCDC93Q567U6 631 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 DISC1Q9NRI5 854 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 DAGLAQ9Y4D2 1042 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 SLC1A4P43007 532 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 ADCY7P51828 1080 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 AMPD3Q01432 767 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 TBC1D8BQ0IIM8 1120 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 ZYXQ15942 572 aaKnown RBP17.21■□□□□ 0.35
LMNB1-203ENST00000460265 TEKT1Q969V4 418 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 BARHL2Q9NY43 387 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 UBR2Q8IWV8 1755 aa17.21■□□□□ 0.35
LMNB1-203ENST00000460265 SLIT2O94813 1529 aa17.21■□□□□ 0.34
LMNB1-203ENST00000460265 SPEF2Q9C093 1822 aa17.21■□□□□ 0.34
LMNB1-203ENST00000460265 EFCAB8A8MWE9 144 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 DNA2P51530 1060 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 KRT31Q15323 416 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 KRT79Q5XKE5 535 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 SNX29Q8TEQ0 813 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 RTFDC1Q9BY42 306 aaPredicted RBP17.2■□□□□ 0.34
LMNB1-203ENST00000460265 RAB34Q9BZG1 259 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 CXorf56Q9H5V9 222 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 BMP2KQ9NSY1 1161 aaPredicted RBP17.2■□□□□ 0.34
LMNB1-203ENST00000460265 DOT1LQ8TEK3 1739 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 SPAG1Q07617 926 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 DPYDQ12882 1025 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 SPICE1Q8N0Z3 855 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 MICALL1Q8N3F8 863 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 FNBP4Q8N3X1 1017 aaPredicted RBP17.2■□□□□ 0.34
LMNB1-203ENST00000460265 MMRN2Q9H8L6 949 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 FOXR1Q6PIV2 292 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 CNPY4Q8N129 248 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 HSD3B7Q9H2F3 369 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 LUC7L2Q9Y383 392 aaKnown RBP17.2■□□□□ 0.34
LMNB1-203ENST00000460265 MYH3P11055 1940 aa17.2■□□□□ 0.34
LMNB1-203ENST00000460265 GDF11O95390 407 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 MNAT1P51948 309 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 ACRBPQ8NEB7 543 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 KCNG1Q9UIX4 513 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 POTEMA6NI47 508 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 COPB1P53618 953 aaKnown RBP17.19■□□□□ 0.34
LMNB1-203ENST00000460265 SV2BQ7L1I2 683 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 NEDD1Q8NHV4 660 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 STX10O60499 249 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 TADA3O75528 432 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 MAP2K2P36507 400 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 EPS15P42566 896 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
LMNB1-203ENST00000460265 DDR1Q08345 913 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 LRRC41Q15345 812 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 FCHSD1Q86WN1 690 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 CNGA4Q8IV77 575 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 LZTS2Q9BRK4 669 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 POLD4Q9HCU8 107 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 KCNQ5Q9NR82 932 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 INTS13Q9NVM9 706 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 NWD2Q9ULI1 1742 aa17.19■□□□□ 0.34
LMNB1-203ENST00000460265 POTEDQ86YR6 584 aa17.18■□□□□ 0.34
LMNB1-203ENST00000460265 TUBB4AP04350 444 aa17.18■□□□□ 0.34
LMNB1-203ENST00000460265 IL17AQ16552 155 aa17.18■□□□□ 0.34
LMNB1-203ENST00000460265 TC2NQ8N9U0 490 aa17.18■□□□□ 0.34
LMNB1-203ENST00000460265 GPR75-ASB3A0A0A6YYF3 556 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 FAM170AA1A519 330 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 STXBP3O00186 592 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 PHACTR2O75167 634 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 TDP2O95551 362 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 FKBP15Q5T1M5 1219 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 ZNF658Q5TYW1 1059 aaPredicted RBP17.17■□□□□ 0.34
LMNB1-203ENST00000460265 CAGE1Q8TC20 777 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 WDR24Q96S15 920 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 NOC4LQ9BVI4 516 aaKnown RBP17.17■□□□□ 0.34
LMNB1-203ENST00000460265 PSD3Q9NYI0 1048 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 B4DLN1 442 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 SARSP49591 514 aaKnown RBP17.17■□□□□ 0.34
LMNB1-203ENST00000460265 HSP90B2PQ58FF3 399 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 GPR161Q8N6U8 529 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms