RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 ACAD9Q9H845 621 aa14.2□□□□□ -0.14
HDAC4-206ENST00000460235 RAVER2Q9HCJ3 691 aaKnown RBP14.2□□□□□ -0.14
HDAC4-206ENST00000460235 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
HDAC4-206ENST00000460235 PFASO15067 1338 aa14.19□□□□□ -0.14
HDAC4-206ENST00000460235 CTDNEP1O95476 244 aa14.19□□□□□ -0.14
HDAC4-206ENST00000460235 SLC4A3P48751 1232 aa14.19□□□□□ -0.14
HDAC4-206ENST00000460235 CRHR2Q13324 411 aa14.19□□□□□ -0.14
HDAC4-206ENST00000460235 GNL2Q13823 731 aaKnown RBP14.19□□□□□ -0.14
HDAC4-206ENST00000460235 TMEM132BQ14DG7 1078 aa14.19□□□□□ -0.14
HDAC4-206ENST00000460235 USH1GQ495M9 461 aa14.19□□□□□ -0.14
HDAC4-206ENST00000460235 NCAPG2Q86XI2 1143 aa14.19□□□□□ -0.14
HDAC4-206ENST00000460235 TRERF1Q96PN7 1200 aa14.19□□□□□ -0.14
HDAC4-206ENST00000460235 CPVLQ9H3G5 476 aa14.19□□□□□ -0.14
HDAC4-206ENST00000460235 PSTPIP2Q9H939 334 aa14.19□□□□□ -0.14
HDAC4-206ENST00000460235 ZNF214Q9UL59 606 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-206ENST00000460235 TRPA1O75762 1119 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 FOSP01100 380 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-206ENST00000460235 GNRH1P01148 92 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 FCER1AP12319 257 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 HOXD10P28358 340 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 ADCY7P51828 1080 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 HTRA3P83110 453 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 KCTD2Q14681 263 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 C17orf99Q6UX52 265 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 ABRAQ8N0Z2 381 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 REPS2Q8NFH8 660 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 RNF146Q9NTX7 359 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 RNF186Q9NXI6 227 aa14.18□□□□□ -0.14
HDAC4-206ENST00000460235 SMCO2A6NFE2 343 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 GCOM1H8Y6P7 765 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-206ENST00000460235 JAK2O60674 1132 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 POLR2MP0CAP2 368 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 BCRP11274 1271 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 FCGRTP55899 365 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 PKN1Q16512 942 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 WDR78Q5VTH9 848 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 WWC2Q6AWC2 1192 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 ANKRD35Q8N283 1001 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 FBXO18Q8NFZ0 1043 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 COA7Q96BR5 231 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 AGBL1Q96MI9 1066 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 ZIC5Q96T25 663 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 MOV10L1Q9BXT6 1211 aaKnown RBP14.17□□□□□ -0.14
HDAC4-206ENST00000460235 ZMYND12Q9H0C1 365 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 RIC8AQ9NPQ8 531 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 BTBD7Q9P203 1132 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 ADD3Q9UEY8 706 aaKnown RBP14.17□□□□□ -0.14
HDAC4-206ENST00000460235 CPA4Q9UI42 421 aa14.17□□□□□ -0.14
HDAC4-206ENST00000460235 ZNF536O15090 1300 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 hCG_1642624A0A1W2PR95 340 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 SPDYE3A6NKU9 549 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 STXBP3O00186 592 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 FDPSP14324 419 aaKnown RBP14.16□□□□□ -0.14
HDAC4-206ENST00000460235 ERCC3P19447 782 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 NUCB2P80303 420 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 SP3Q02447 781 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 ST3GAL1Q11201 340 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 AP3B2Q13367 1082 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.16□□□□□ -0.14
HDAC4-206ENST00000460235 ERO1AQ96HE7 468 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 PCDHA4Q9UN74 947 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 ATP6V1DQ9Y5K8 247 aa14.16□□□□□ -0.14
HDAC4-206ENST00000460235 ADGRA2Q96PE1 1338 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 LOC102724159A0A0B4J2E5 919 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 PIK3CDO00329 1044 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 KRT2P35908 639 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 SNAP25P60880 206 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 PWP2Q15269 919 aaKnown RBP14.15□□□□□ -0.14
HDAC4-206ENST00000460235 SLC35G1Q2M3R5 365 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 RNF207Q6ZRF8 634 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 PLEKHH3Q7Z736 793 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 BLIDQ8IZY5 108 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 REXO1Q8N1G1 1221 aaKnown RBP14.15□□□□□ -0.14
HDAC4-206ENST00000460235 DAGLBQ8NCG7 672 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 SOCS4Q8WXH5 440 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 GPKOWQ92917 476 aaPredicted RBP eCLIP14.15□□□□□ -0.14
HDAC4-206ENST00000460235 MMP19Q99542 508 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 NAP1L4Q99733 375 aaKnown RBP14.15□□□□□ -0.14
HDAC4-206ENST00000460235 TXNRD2Q9NNW7 524 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 HOMER2Q9NSB8 354 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 VPS54Q9P1Q0 977 aa14.15□□□□□ -0.14
HDAC4-206ENST00000460235 CIZ1Q9ULV3 898 aaPredicted RBP14.15□□□□□ -0.14
HDAC4-206ENST00000460235 SLC15A5A6NIM6 579 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 FKTNO75072 461 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 CNMDO75829 334 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 TBC1D8O95759 1140 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 CFBP00751 764 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 MMP1P03956 469 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 KRT40Q6A162 431 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 NSMFQ6X4W1 530 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 KRT25Q7Z3Z0 450 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 DNAJC5GQ8N7S2 189 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 PHF20Q9BVI0 1012 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 FOXP1Q9H334 677 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-206ENST00000460235 ZSCAN16Q9H4T2 348 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-206ENST00000460235 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 WBP1LQ9NX94 342 aa14.14□□□□□ -0.15
HDAC4-206ENST00000460235 BAZ2BQ9UIF8 2168 aaKnown RBP14.13□□□□□ -0.15
HDAC4-206ENST00000460235 THSD7BQ9C0I4 1608 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 CCDC194A0A1B0GVG4 234 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms