RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CAP2P40123 477 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 EPS15P42566 896 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 TOB1P50616 345 aaPredicted RBP11.76□□□□□ -0.53
HERC4-207ENST00000460168 ZNF445P59923 1031 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 TTBK2Q6IQ55 1244 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 CCDC73Q6ZRK6 1079 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 CCAR1Q8IX12 1150 aaKnown RBP11.76□□□□□ -0.53
HERC4-207ENST00000460168 ADGRF4Q8IZF3 695 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 BLIDQ8IZY5 108 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 GMCL1P1Q8NEA9 526 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 TRPM4Q8TD43 1214 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 TEPSINQ96N21 525 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 NOL7Q9UMY1 257 aaKnown RBP11.76□□□□□ -0.53
HERC4-207ENST00000460168 FAM205CA6NFA0 338 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 NR1I2O75469 434 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 TPM3P06753 285 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 ASNSP08243 561 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 LMOD1P29536 600 aaPredicted RBP11.76□□□□□ -0.53
HERC4-207ENST00000460168 ECE1P42892 770 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 MAP3K10Q02779 954 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 IKQ13123 557 aaPredicted RBP11.76□□□□□ -0.53
HERC4-207ENST00000460168 GALNT17Q6IS24 598 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 PIK3AP1Q6ZUJ8 805 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 APOBEC3FQ8IUX4 373 aaKnown RBP11.76□□□□□ -0.53
HERC4-207ENST00000460168 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
HERC4-207ENST00000460168 ATL2Q8NHH9 583 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 CEP131Q9UPN4 1083 aa11.76□□□□□ -0.53
HERC4-207ENST00000460168 A0A1W2PRG0 241 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 hCG_1984214I3L0E3 225 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 PPP6R2O75170 966 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 NDUFB10O96000 172 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 PTPAQ15257 358 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 EARS2Q5JPH6 523 aaKnown RBP11.75□□□□□ -0.53
HERC4-207ENST00000460168 C9orf131Q5VYM1 1079 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 CCDC91Q7Z6B0 441 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 SPICE1Q8N0Z3 855 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 ZNF713Q8N859 430 aaPredicted RBP11.75□□□□□ -0.53
HERC4-207ENST00000460168 FSIP1Q8NA03 581 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 MRPS27Q92552 414 aaKnown RBP11.75□□□□□ -0.53
HERC4-207ENST00000460168 TNFRSF25Q93038 417 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 NUP62CLQ9H1M0 184 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 JMJD4Q9H9V9 463 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 GOPCQ9HD26 462 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 DDX19AQ9NUU7 478 aaKnown RBP11.75□□□□□ -0.53
HERC4-207ENST00000460168 GGA3Q9NZ52 723 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.75□□□□□ -0.53
HERC4-207ENST00000460168 SYNPO2Q9UMS6 1093 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 PCDHB6Q9Y5E3 794 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 PNMA6FA0A0J9YX94 578 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 TRIM75PA6NK02 468 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 GNA11P29992 359 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 LRSAM1Q6UWE0 723 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 GAS2L3Q86XJ1 694 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 ERCC4Q92889 916 aaPredicted RBP11.75□□□□□ -0.53
HERC4-207ENST00000460168 GMCL1Q96IK5 515 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 NUP88Q99567 741 aaPredicted RBP11.75□□□□□ -0.53
HERC4-207ENST00000460168 ZMYND12Q9H0C1 365 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 SH2D4AQ9H788 454 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 C6orf50Q9HD87 102 aa11.75□□□□□ -0.53
HERC4-207ENST00000460168 CCDC194A0A1B0GVG4 234 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 A0A1W2PQ27 194 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 A0A1W2PQ64 194 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 A0A1W2PQD8 194 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 SMCO2A6NFE2 343 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 USP17L10C9JJH3 530 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 ZBTB5O15062 677 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 BMP3P12645 472 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 GPR162Q16538 588 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 CAMK4Q16566 473 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 NOM1Q5C9Z4 860 aaKnown RBP11.74□□□□□ -0.53
HERC4-207ENST00000460168 NBPF12Q5TAG4 269 aaPredicted RBP11.74□□□□□ -0.53
HERC4-207ENST00000460168 DAGLBQ8NCG7 672 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 RASGRP4Q8TDF6 673 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 TNMDQ9H2S6 317 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
HERC4-207ENST00000460168 TMX2Q9Y320 296 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 TMEM232C9JQI7 657 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 TERF2Q15554 542 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 ZYXQ15942 572 aaKnown RBP11.74□□□□□ -0.53
HERC4-207ENST00000460168 DCAF15Q66K64 600 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 COA7Q96BR5 231 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 HOOK2Q96ED9 719 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 GOLPH3LQ9H4A5 285 aa11.74□□□□□ -0.53
HERC4-207ENST00000460168 A0A1B0GVL5 298 aa11.73□□□□□ -0.53
HERC4-207ENST00000460168 PHF20L1A8MW92 1017 aa11.73□□□□□ -0.53
HERC4-207ENST00000460168 ADAMTS3O15072 1205 aa11.73□□□□□ -0.53
HERC4-207ENST00000460168 KINO60870 393 aaKnown RBP11.73□□□□□ -0.53
HERC4-207ENST00000460168 TRAPPC10P48553 1259 aa11.73□□□□□ -0.53
HERC4-207ENST00000460168 HIRAP54198 1017 aaPredicted RBP11.73□□□□□ -0.53
HERC4-207ENST00000460168 MAP9Q49MG5 647 aa11.73□□□□□ -0.53
HERC4-207ENST00000460168 TTC38Q5R3I4 469 aa11.73□□□□□ -0.53
HERC4-207ENST00000460168 PRAMEF18Q5VWM3 479 aa11.73□□□□□ -0.53
HERC4-207ENST00000460168 DPY19L2Q6NUT2 758 aa11.73□□□□□ -0.53
HERC4-207ENST00000460168 KRI1Q8N9T8 703 aaKnown RBP11.73□□□□□ -0.53
HERC4-207ENST00000460168 ADARB2Q9NS39 739 aaKnown RBP11.73□□□□□ -0.53
HERC4-207ENST00000460168 ATAD5Q96QE3 1844 aa11.73□□□□□ -0.53
HERC4-207ENST00000460168 H0YHG0 523 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms