RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CLIC6Q96NY7 704 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 SLF1Q9BQI6 1058 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 FBXO28Q9NVF7 368 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 SNCAIPQ9Y6H5 919 aa27.84■■■□□ 2.05
U2AF1-204ENST00000459639 FSD2A1L4K1 749 aa27.83■■■□□ 2.05
U2AF1-204ENST00000459639 NDUFA8P51970 172 aa27.83■■■□□ 2.05
U2AF1-204ENST00000459639 VGLL4Q14135 290 aa27.83■■■□□ 2.05
U2AF1-204ENST00000459639 USH1GQ495M9 461 aa27.83■■■□□ 2.05
U2AF1-204ENST00000459639 MCTP2Q6DN12 878 aa27.83■■■□□ 2.05
U2AF1-204ENST00000459639 PRPF38AQ8NAV1 312 aaKnown RBP27.83■■■□□ 2.05
U2AF1-204ENST00000459639 HPSEQ9Y251 543 aa27.83■■■□□ 2.05
U2AF1-204ENST00000459639 KINO60870 393 aaKnown RBP27.82■■■□□ 2.04
U2AF1-204ENST00000459639 PFKFB1P16118 471 aa27.82■■■□□ 2.04
U2AF1-204ENST00000459639 UBE2SQ16763 222 aa27.82■■■□□ 2.04
U2AF1-204ENST00000459639 TBCKQ8TEA7 893 aa27.82■■■□□ 2.04
U2AF1-204ENST00000459639 TNMDQ9H2S6 317 aa27.82■■■□□ 2.04
U2AF1-204ENST00000459639 CSADQ9Y600 493 aa27.82■■■□□ 2.04
U2AF1-204ENST00000459639 MYH7BA7E2Y1 1941 aa27.82■■■□□ 2.04
U2AF1-204ENST00000459639 GOLGA6L3A6NEY3 463 aa27.81■■■□□ 2.04
U2AF1-204ENST00000459639 ARL6IP4Q66PJ3 421 aaKnown RBP27.81■■■□□ 2.04
U2AF1-204ENST00000459639 AFG3L2Q9Y4W6 797 aa27.81■■■□□ 2.04
U2AF1-204ENST00000459639 MRVI1Q9Y6F6 885 aa27.81■■■□□ 2.04
U2AF1-204ENST00000459639 SMCHD1A6NHR9 2005 aa27.81■■■□□ 2.04
U2AF1-204ENST00000459639 AP3B2Q13367 1082 aa27.81■■■□□ 2.04
U2AF1-204ENST00000459639 DGKZQ13574 1117 aa27.81■■■□□ 2.04
U2AF1-204ENST00000459639 TANGO6Q9C0B7 1094 aa27.81■■■□□ 2.04
U2AF1-204ENST00000459639 RPAP3Q9H6T3 665 aaPredicted RBP27.81■■■□□ 2.04
U2AF1-204ENST00000459639 RLFQ13129 1914 aa27.8■■■□□ 2.04
U2AF1-204ENST00000459639 LAD1O00515 517 aa27.8■■■□□ 2.04
U2AF1-204ENST00000459639 MAP3K11Q16584 847 aa27.8■■■□□ 2.04
U2AF1-204ENST00000459639 CCDC174Q6PII3 467 aa27.8■■■□□ 2.04
U2AF1-204ENST00000459639 RBM43Q6ZSC3 357 aaKnown RBP27.8■■■□□ 2.04
U2AF1-204ENST00000459639 GAS2L3Q86XJ1 694 aa27.8■■■□□ 2.04
U2AF1-204ENST00000459639 C4orf32Q8N8J7 132 aa27.8■■■□□ 2.04
U2AF1-204ENST00000459639 CTAGE5O15320 804 aa27.79■■■□□ 2.04
U2AF1-204ENST00000459639 GRIN1Q05586 938 aa27.79■■■□□ 2.04
U2AF1-204ENST00000459639 RBM46Q8TBY0 533 aaKnown RBP27.79■■■□□ 2.04
U2AF1-204ENST00000459639 FAM13BQ9NYF5 915 aa27.79■■■□□ 2.04
U2AF1-204ENST00000459639 MEIS2O14770 477 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 HMGCS2P54868 508 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 LETM2Q2VYF4 491 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 PPP1R9AQ9ULJ8 1098 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 ABCB11O95342 1321 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 LOC285556D6RIA3 1793 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 RBBP6Q7Z6E9 1792 aaKnown RBP27.78■■■□□ 2.04
U2AF1-204ENST00000459639 USP17L15C9J2P7 530 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 USP17L13C9JLJ4 530 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 USP17L11C9JVI0 530 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 USP17L18D6R9N7 530 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 USP17L22D6RA61 530 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 USP17L17D6RBQ6 530 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 USP17L19D6RCP7 530 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 USP17L20D6RJB6 530 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 FLOT1O75955 427 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 FDX1P10109 184 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 USP17L24Q0WX57 530 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 CAMK4Q16566 473 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 SH3D19Q5HYK7 790 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 USP17L6PQ6QN14 398 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 ANKRD13AQ8IZ07 590 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 CSRNP2Q9H175 543 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 TMOD4Q9NZQ9 345 aa27.78■■■□□ 2.04
U2AF1-204ENST00000459639 PIK3CDO00329 1044 aa27.77■■■□□ 2.04
U2AF1-204ENST00000459639 OPLAHO14841 1288 aa27.77■■■□□ 2.04
U2AF1-204ENST00000459639 CCNT1O60563 726 aaKnown RBP27.77■■■□□ 2.04
U2AF1-204ENST00000459639 ICAM1P05362 532 aa27.77■■■□□ 2.04
U2AF1-204ENST00000459639 PRPHP41219 470 aa27.77■■■□□ 2.04
U2AF1-204ENST00000459639 SYKP43405 635 aa27.77■■■□□ 2.04
U2AF1-204ENST00000459639 TIGD1Q96MW7 591 aa27.77■■■□□ 2.04
U2AF1-204ENST00000459639 MRPL11Q9Y3B7 192 aaKnown RBP27.77■■■□□ 2.04
U2AF1-204ENST00000459639 ZNF202O95125 648 aa27.76■■■□□ 2.03
U2AF1-204ENST00000459639 SAMD1Q6SPF0 538 aaPredicted RBP27.76■■■□□ 2.03
U2AF1-204ENST00000459639 ANO3Q9BYT9 981 aa27.76■■■□□ 2.03
U2AF1-204ENST00000459639 SLC38A10Q9HBR0 1119 aa27.76■■■□□ 2.03
U2AF1-204ENST00000459639 PNMA2Q9UL42 364 aa27.76■■■□□ 2.03
U2AF1-204ENST00000459639 ZNF536O15090 1300 aa27.75■■■□□ 2.03
U2AF1-204ENST00000459639 FOSP01100 380 aaPredicted RBP27.75■■■□□ 2.03
U2AF1-204ENST00000459639 LDHDQ86WU2 507 aa27.75■■■□□ 2.03
U2AF1-204ENST00000459639 NAP1L4Q99733 375 aaKnown RBP27.75■■■□□ 2.03
U2AF1-204ENST00000459639 TSPY26PQ9H489 355 aa27.75■■■□□ 2.03
U2AF1-204ENST00000459639 KCNH3Q9ULD8 1083 aa27.75■■■□□ 2.03
U2AF1-204ENST00000459639 CLEC11AQ9Y240 323 aa27.75■■■□□ 2.03
U2AF1-204ENST00000459639 COL11A1P12107 1806 aaPredicted RBP27.75■■■□□ 2.03
U2AF1-204ENST00000459639 VWA3AA6NCI4 1184 aa27.75■■■□□ 2.03
U2AF1-204ENST00000459639 NEMFO60524 1076 aa27.75■■■□□ 2.03
U2AF1-204ENST00000459639 TAL1P17542 331 aaPredicted RBP27.75■■■□□ 2.03
U2AF1-204ENST00000459639 TTLL12Q14166 644 aaPredicted RBP27.74■■■□□ 2.03
U2AF1-204ENST00000459639 SPECC1Q5M775 1068 aa27.74■■■□□ 2.03
U2AF1-204ENST00000459639 PPP4R3AQ6IN85 833 aa27.74■■■□□ 2.03
U2AF1-204ENST00000459639 ARMC9Q7Z3E5 817 aa27.74■■■□□ 2.03
U2AF1-204ENST00000459639 FUCA2Q9BTY2 467 aa27.74■■■□□ 2.03
U2AF1-204ENST00000459639 TMEM60Q9H2L4 133 aa27.74■■■□□ 2.03
U2AF1-204ENST00000459639 CCPG1Q9ULG6 757 aa27.74■■■□□ 2.03
U2AF1-204ENST00000459639 OR52Z1P0C646 297 aa27.73■■■□□ 2.03
U2AF1-204ENST00000459639 GCFC2P16383 781 aaKnown RBP27.73■■■□□ 2.03
U2AF1-204ENST00000459639 LONP1P36776 959 aaKnown RBP27.73■■■□□ 2.03
U2AF1-204ENST00000459639 PPATQ06203 517 aa27.73■■■□□ 2.03
U2AF1-204ENST00000459639 L1TD1Q5T7N2 865 aaKnown RBP27.73■■■□□ 2.03
U2AF1-204ENST00000459639 ERO1BQ86YB8 467 aa27.73■■■□□ 2.03
U2AF1-204ENST00000459639 SPDYE3A6NKU9 549 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms