RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 CCNT1O60563 726 aaKnown RBP6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 PPP6R2O75170 966 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 CELF2O95319 508 aaKnown RBP6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 CFBP00751 764 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 ALAS1P13196 640 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 GUCY1A2P33402 732 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 MCM7P33993 719 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 GTF2A2P52657 109 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 OAZ1P54368 228 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 CCNA1P78396 465 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 VGLL4Q14135 290 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 SLC39A14Q15043 492 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 PKN1Q16512 942 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 TKFCQ3LXA3 575 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 MAP1SQ66K74 1059 aaPredicted RBP6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 WWC2Q6AWC2 1192 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 ADALQ6DHV7 355 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 TTBK2Q6IQ55 1244 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 SASS6Q6UVJ0 657 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 DTHD1Q6ZMT9 781 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 NEK8Q86SG6 692 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 CEP57L1Q8IYX8 460 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 ACER1Q8TDN7 264 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 SMCR8Q8TEV9 937 aaPredicted RBP6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 LEO1Q8WVC0 666 aaPredicted RBP6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 COA7Q96BR5 231 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 CDK5RAP3Q96JB5 506 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 NUP88Q99567 741 aaPredicted RBP6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 GLIS2Q9BZE0 524 aaPredicted RBP6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 MAF1Q9H063 256 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 TNMDQ9H2S6 317 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 FBXO40Q9UH90 709 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 RCOR1Q9UKL0 485 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 ZDHHC9Q9Y397 364 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 ASTN2O75129 1339 aaPredicted RBP6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 MYPNQ86TC9 1320 aa6.64□□□□□ -1.35
RNU1-88P-201ENST00000459274 A0A1W2PRG0 241 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 ICAM1P05362 532 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 VCAM1P19320 739 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 UBA7P41226 1012 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 USP11P51784 963 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 INHBEP58166 350 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 FUT2Q10981 343 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 PPIL2Q13356 520 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 ZNF174Q15697 407 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 MAP3K11Q16584 847 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 LETM2Q2VYF4 491 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 JAKMIP3Q5VZ66 844 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 ARL6IP4Q66PJ3 421 aaKnown RBP6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 CAVIN1Q6NZI2 390 aaKnown RBP6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 PAXIP1Q6ZW49 1069 aaPredicted RBP6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 SLFN12Q8IYM2 578 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 TMEM87AQ8NBN3 555 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 SMC1BQ8NDV3 1235 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 ERMNQ8TAM6 284 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 MRPS27Q92552 414 aaKnown RBP6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 OPTNQ96CV9 577 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 CALML4Q96GE6 196 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 LRRC27Q9C0I9 530 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 GZF1Q9H116 711 aaPredicted RBP6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 NUP62CLQ9H1M0 184 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 GDPD2Q9HCC8 539 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 LMBRD1Q9NUN5 540 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 DDX19AQ9NUU7 478 aaKnown RBP6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 SLC5A4Q9NY91 659 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 USP25Q9UHP3 1055 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 AFG3L2Q9Y4W6 797 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 IVNS1ABPQ9Y6Y0 642 aa6.63□□□□□ -1.35
RNU1-88P-201ENST00000459274 PHIPQ8WWQ0 1821 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 A0A1W2PQ27 194 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 A0A1W2PQ64 194 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 A0A1W2PQD8 194 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 SPDYE5A6NIY4 337 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 UBE2Q2LH0YL09 131 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 CYTH3O43739 400 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 NEMFO60524 1076 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 DTNBO60941 627 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 SLC25A27O95847 323 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 ZBTB48P10074 688 aaPredicted RBP6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 CMA1P23946 247 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 MARCKSP29966 332 aaPredicted RBP6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 SYKP43405 635 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 NASPP49321 788 aaPredicted RBP6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 TPM4P67936 248 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 AMPD3Q01432 767 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 FAM160A1Q05DH4 1040 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 NR5A1Q13285 461 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 CALCRLQ16602 461 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 INF2Q27J81 1249 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 SH3D19Q5HYK7 790 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 CCDC183Q5T5S1 534 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 L1TD1Q5T7N2 865 aaKnown RBP6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 WDR78Q5VTH9 848 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 FAM173BQ6P4H8 233 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 CATSPERGQ6ZRH7 1159 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 FCHSD1Q86WN1 690 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 ZNF579Q8NAF0 562 aaKnown RBP6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 LINC00301Q8NCQ3 95 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 CHST13Q8NET6 341 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms