RNA–Protein interactions for RNA: ENST00000458153.5

MKLN1-206, Transcript of muskelin 1, human

TSL 2

Gene MKLN1, Length 2,448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKLN1-206	ENST00000458153	HERC6	Q8IVU3	1022 aa		10.88	□□□□□ -0.67
MKLN1-206	ENST00000458153	GMCL1P1	Q8NEA9	526 aa		10.88	□□□□□ -0.67
MKLN1-206	ENST00000458153	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.88	□□□□□ -0.67	7e-8	■■■□□ 16.2
MKLN1-206	ENST00000458153	RAVER2	Q9HCJ3	691 aa	Known RBP	10.88	□□□□□ -0.67
MKLN1-206	ENST00000458153	PIEZO1	Q92508	2521 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	FAM86C2P	A6NEL3	165 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	USP17L12	C9JPN9	530 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	USP17L21	D6R901	530 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153		F5H6K3	240 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	PRKAB2	O43741	272 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	SMPD1	P17405	629 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	KLRC3	Q07444	240 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	UBE3C	Q15386	1083 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	PUS10	Q3MIT2	529 aa	Known RBP	10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.87	□□□□□ -0.67	5e-7	■■■□□ 17.3
MKLN1-206	ENST00000458153	MKL1	Q969V6	931 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	SCLY	Q96I15	445 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	NUP88	Q99567	741 aa	Predicted RBP	10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	RFXAP	O00287	272 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	GOLIM4	O00461	696 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	LPXN	O60711	386 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	RASA1	P20936	1047 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	MRE11	P49959	708 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	GIMAP6	Q6P9H5	292 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	COL4A6	Q14031	1691 aa		10.87	□□□□□ -0.67
MKLN1-206	ENST00000458153	CYP2D7	A0A087X1C5	515 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	SOWAHB	A6NEL2	793 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	ALAD	P13716	330 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	CEP85	Q6P2H3	762 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	CTR9	Q6PD62	1173 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	NOL8	Q76FK4	1167 aa	Known RBP	10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	FAM160B2	Q86V87	743 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	CPXCR1	Q8N123	301 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	ARNTL2	Q8WYA1	636 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	A1CF	Q9NQ94	594 aa	Known RBP	10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	CDH23	Q9H251	3354 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	PLA2G6	O60733	806 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	TAPT1	Q6NXT6	567 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	FRAT1	Q92837	279 aa	Predicted RBP	10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	UBE2Z	Q9H832	354 aa	Predicted RBP	10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	RNF146	Q9NTX7	359 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	PAG1	Q9NWQ8	432 aa		10.86	□□□□□ -0.67
MKLN1-206	ENST00000458153	MUC6	Q6W4X9	2439 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	DYNC1LI2	O43237	492 aa	Predicted RBP	10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	RAD21	O60216	631 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	KPNA6	O60684	536 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	PSMC6	P62333	389 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	CNTN2	Q02246	1040 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	ZSCAN25	Q6NSZ9	544 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	NFRKB	Q6P4R8	1299 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	CCDC155	Q8N6L0	562 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	RHPN1	Q8TCX5	695 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	KIFC2	Q96AC6	838 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	CLUAP1	Q96AJ1	413 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	DNAJC2	Q99543	621 aa	Known RBP	10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	MTG1	Q9BT17	334 aa	Predicted RBP	10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	C1orf115	Q9H7X2	142 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	SLC4A4	Q9Y6R1	1079 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	RBM47	A0AV96	593 aa	Known RBP	10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	ARHGEF15	O94989	841 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	PARN	O95453	639 aa	Known RBP	10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	CPT1A	P50416	773 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	BFSP2	Q13515	415 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	DUSP28	Q4G0W2	176 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	FAM178B	Q8IXR5	827 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	RETREG2	Q8NC44	543 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	SNX27	Q96L92	541 aa		10.85	□□□□□ -0.67
MKLN1-206	ENST00000458153	IQCF3	P0C7M6	154 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	PURA	Q00577	322 aa	Known RBP	10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	NHLH1	Q02575	133 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	KRT40	Q6A162	431 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	GJD3	Q8N144	294 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	CLASRP	Q8N2M8	674 aa	Known RBP	10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	KIF1BP	Q96EK5	621 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	ZNF287	Q9HBT7	754 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	CD320	Q9NPF0	282 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	RAD50	Q92878	1312 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	RALGAPA2	Q2PPJ7	1873 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	NKRF	O15226	690 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	KCNJ6	P48051	423 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	ERVK-21	P61565	698 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	RBL2	Q08999	1139 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	PPP4R3B	Q5MIZ7	849 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	DEFB128	Q7Z7B8	93 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	GMCL1	Q96IK5	515 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	HAUS7	Q99871	368 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	CERS4	Q9HA82	394 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	TRMT13	Q9NUP7	481 aa	Known RBP	10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	EXOC6B	Q9Y2D4	811 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	COG6	Q9Y2V7	657 aa		10.84	□□□□□ -0.67
MKLN1-206	ENST00000458153	ZNF536	O15090	1300 aa		10.83	□□□□□ -0.68
MKLN1-206	ENST00000458153	EFCAB14	O75071	495 aa		10.83	□□□□□ -0.68
MKLN1-206	ENST00000458153	CYP2C9	P11712	490 aa		10.83	□□□□□ -0.68
MKLN1-206	ENST00000458153	BMP3	P12645	472 aa		10.83	□□□□□ -0.68
MKLN1-206	ENST00000458153	ATP5J	P18859	108 aa		10.83	□□□□□ -0.68
MKLN1-206	ENST00000458153	FBXO16	Q8IX29	292 aa	Predicted RBP	10.83	□□□□□ -0.68
MKLN1-206	ENST00000458153	CHURC1	Q8WUH1	139 aa		10.83	□□□□□ -0.68
MKLN1-206	ENST00000458153	TET1	Q8NFU7	2136 aa		10.83	□□□□□ -0.68

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