RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ADALQ6DHV7 355 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 KIF9Q9HAQ2 790 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 POLR2MP0CAP2 368 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 DSCC1Q9BVC3 393 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 C1orf112Q9NSG2 853 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 ARPP21Q9UBL0 812 aaPredicted RBP21.52■■□□□ 1.04
SNX27-204ENST00000458013 TNKSO95271 1327 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 GOLGA8KD6RF30 607 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 CLIC2O15247 247 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 HP1BP3Q5SSJ5 553 aaPredicted RBP21.52■■□□□ 1.04
SNX27-204ENST00000458013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNX27-204ENST00000458013 FTOQ9C0B1 505 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNX27-204ENST00000458013 PCDHB4Q9Y5E5 795 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 UGGT2Q9NYU1 1516 aa21.52■■□□□ 1.03
SNX27-204ENST00000458013 RASSF2P50749 326 aa21.52■■□□□ 1.03
SNX27-204ENST00000458013 CASP14P31944 242 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 POLGP54098 1239 aaPredicted RBP21.51■■□□□ 1.03
SNX27-204ENST00000458013 MYL7Q01449 175 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 RBL2Q08999 1139 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 PPP1R13BQ96KQ4 1090 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 ZNF215Q9UL58 517 aaPredicted RBP21.51■■□□□ 1.03
SNX27-204ENST00000458013 G3BP2Q9UN86 482 aaKnown RBP21.51■■□□□ 1.03
SNX27-204ENST00000458013 ZNF148Q9UQR1 794 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 CD2APQ9Y5K6 639 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 SLC16A2P36021 539 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 BFSP1Q12934 665 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 TRIM58Q8NG06 486 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 ADCY9O60503 1353 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 LPXNO60711 386 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 ZKSCAN8Q15776 578 aaPredicted RBP21.51■■□□□ 1.03
SNX27-204ENST00000458013 OR8K1Q8NGG5 319 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 GDAP1Q8TB36 358 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 LZTS2Q9BRK4 669 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 STK24Q9Y6E0 443 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 GNA14O95837 355 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 HSPD1P10809 573 aaKnown RBP21.51■■□□□ 1.03
SNX27-204ENST00000458013 P3H4Q92791 437 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 INPP5FQ9Y2H2 1132 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
SNX27-204ENST00000458013 PIK3C2GO75747 1445 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 ASXL2Q76L83 1435 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 AOX1Q06278 1338 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 CCT5P48643 541 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 EIF4A1P60842 406 aaKnown RBP21.51■■□□□ 1.03
SNX27-204ENST00000458013 MRPS25P82663 173 aaKnown RBP21.51■■□□□ 1.03
SNX27-204ENST00000458013 PLA2G4DQ86XP0 818 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 SPATA17Q96L03 361 aa21.51■■□□□ 1.03
SNX27-204ENST00000458013 KLRF2D3W0D1 207 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 OR52Z1P0C646 297 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 MKRN3Q13064 507 aaKnown RBP21.5■■□□□ 1.03
SNX27-204ENST00000458013 CERKLQ49MI3 558 aaPredicted RBP21.5■■□□□ 1.03
SNX27-204ENST00000458013 NT5C3AQ9H0P0 336 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 KIAA1024Q9UPX6 916 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 TMEM232C9JQI7 657 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 PTGDRQ13258 359 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 TBK1Q9UHD2 729 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 WHAMMP3Q1A5X7 153 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 PNMA1Q8ND90 353 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 CNOT6LQ96LI5 555 aaKnown RBP21.5■■□□□ 1.03
SNX27-204ENST00000458013 ANLNQ9NQW6 1124 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 INTUQ9ULD6 942 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 ESYT2A0FGR8 921 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 LRRN2O75325 713 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 FAM178BQ8IXR5 827 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 RMDN2Q96LZ7 410 aa21.5■■□□□ 1.03
SNX27-204ENST00000458013 PUS3Q9BZE2 481 aaKnown RBP21.5■■□□□ 1.03
SNX27-204ENST00000458013 DMP1Q13316 513 aaPredicted RBP21.5■■□□□ 1.03
SNX27-204ENST00000458013 MOCS3O95396 460 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 HADHQ16836 314 aaKnown RBP21.49■■□□□ 1.03
SNX27-204ENST00000458013 MYLK4Q86YV6 388 aaPredicted RBP21.49■■□□□ 1.03
SNX27-204ENST00000458013 CFAP36Q96G28 342 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 GCKP35557 465 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 FAM133BQ5BKY9 247 aaKnown RBP21.49■■□□□ 1.03
SNX27-204ENST00000458013 ZBTB33Q86T24 672 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 KCNQ4P56696 695 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 PLCB4Q15147 1175 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 FAM71BQ8TC56 605 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 GRK7Q8WTQ7 553 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 DYNLL1P63167 89 aaKnown RBP21.49■■□□□ 1.03
SNX27-204ENST00000458013 RYBPQ8N488 228 aaPredicted RBP21.49■■□□□ 1.03
SNX27-204ENST00000458013 BCAS4Q8TDM0 211 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 TEKT1Q969V4 418 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 TEKT3Q9BXF9 490 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 SLCO1A2P46721 670 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 ARPP19P56211 112 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 OSTNP61366 133 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 BRD3Q15059 726 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 TMED2Q15363 201 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 SULF1Q8IWU6 871 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 SLC35F6Q8N357 371 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 FANCBQ8NB91 859 aa21.49■■□□□ 1.03
SNX27-204ENST00000458013 WDR91A4D1P6 747 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 BRD1O95696 1058 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 DBN1Q16643 649 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 ADCK5Q3MIX3 580 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 NEK8Q86SG6 692 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 FBXO11Q86XK2 927 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 ANKRD35Q8N283 1001 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 MAIP1Q8WWC4 291 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 ARMCX3Q9UH62 379 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms