RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 FAM83BQ5T0W9 1011 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 TTBK2Q6IQ55 1244 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 FAM173BQ6P4H8 233 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 RASGRP2Q7LDG7 609 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 ARMC9Q7Z3E5 817 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 MYPNQ86TC9 1320 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 LDHDQ86WU2 507 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 FBXO11Q86XK2 927 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 ANKRD13AQ8IZ07 590 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 SAMD3Q8N6K7 520 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 PRPF38AQ8NAV1 312 aaKnown RBP10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 CUL5Q93034 780 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 SHISA4Q96DD7 197 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 CDCA5Q96FF9 252 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 NAP1L4Q99733 375 aaKnown RBP10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 MAF1Q9H063 256 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 RANBP17Q9H2T7 1088 aaKnown RBP10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 VAT1LQ9HCJ6 419 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 RIC8AQ9NPQ8 531 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 PRR12Q9ULL5 1215 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 POLR2AP24928 1970 aaKnown RBP10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 POTECB2RU33 542 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 ADM5C9JUS6 153 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 LAD1O00515 517 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 SLC16A2P36021 539 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 ME1P48163 572 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 PPATQ06203 517 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 AP3B2Q13367 1082 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 MTMR2Q13614 643 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 NONOQ15233 471 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 SF3A1Q15459 793 aaKnown RBP10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 EAPPQ56P03 285 aaPredicted RBP10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 SH3D19Q5HYK7 790 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 ADALQ6DHV7 355 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 TYW1BQ6NUM6 668 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 SPICE1Q8N0Z3 855 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 OXER1Q8TDS5 423 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 PIBF1Q8WXW3 757 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 SLF1Q9BQI6 1058 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 GDPD2Q9HCC8 539 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 TMOD4Q9NZQ9 345 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 TFIP11Q9UBB9 837 aaKnown RBP10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 SCAF8Q9UPN6 1271 aaKnown RBP10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 PCDHA1Q9Y5I3 950 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 ZHX2Q9Y6X8 837 aa10.19□□□□□ -0.78
CDC42EP3-204ENST00000457889 ABCB11O95342 1321 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 SPDYE5A6NIY4 337 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 CXCL11O14625 94 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 LETM1O95202 739 aaPredicted RBP10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 FOSP01100 380 aaPredicted RBP10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 VCAM1P19320 739 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 OAZ1P54368 228 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 SPP2Q13103 211 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 VGLL4Q14135 290 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 PTPAQ15257 358 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 PRAMEF18Q5VWM3 479 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 ARL6IP4Q66PJ3 421 aaKnown RBP10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 GPR153Q6NV75 609 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 ERO1BQ86YB8 467 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 ZKSCAN4Q969J2 545 aaPredicted RBP10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 FERMT2Q96AC1 680 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 NUP88Q99567 741 aaPredicted RBP10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 CPVLQ9H3G5 476 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 PSTPIP2Q9H939 334 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 DDX19AQ9NUU7 478 aaKnown RBP10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 PCDHA6Q9UN73 950 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 AFG3L2Q9Y4W6 797 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 PCDHA8Q9Y5H6 950 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 SNCAIPQ9Y6H5 919 aa10.18□□□□□ -0.78
CDC42EP3-204ENST00000457889 PHIPQ8WWQ0 1821 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 PIK3CDO00329 1044 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 CUTAO60888 179 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 PPP1R11O60927 126 aaPredicted RBP10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 GCFC2P16383 781 aaKnown RBP10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 TOB1P50616 345 aaPredicted RBP10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 KIAA1755Q5JYT7 1200 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 TTC38Q5R3I4 469 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 CCDC73Q6ZRK6 1079 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 PIK3AP1Q6ZUJ8 805 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 KRI1Q8N9T8 703 aaKnown RBP10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 GPT2Q8TD30 523 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 CHAMP1Q96JM3 812 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 GLIS2Q9BZE0 524 aaPredicted RBP10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 EMILIN3Q9NT22 766 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 MAP3K20Q9NYL2 800 aaKnown RBP10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 PPP1R9AQ9ULJ8 1098 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 MRPL11Q9Y3B7 192 aaKnown RBP10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 CLIC4Q9Y696 253 aa10.17□□□□□ -0.78
CDC42EP3-204ENST00000457889 OTOFQ9HC10 1997 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 USP17L15C9J2P7 530 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 USP17L13C9JLJ4 530 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 USP17L11C9JVI0 530 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 USP17L18D6R9N7 530 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 USP17L22D6RA61 530 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 USP17L17D6RBQ6 530 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 USP17L19D6RCP7 530 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 USP17L20D6RJB6 530 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms