RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 RANBP17Q9H2T7 1088 aaKnown RBP10.04□□□□□ -0.8
RIF1-208ENST00000457745 FOXP1Q9H334 677 aaPredicted RBP10.04□□□□□ -0.8
RIF1-208ENST00000457745 SH3GLB2Q9NR46 395 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 BIN2Q9UBW5 565 aaPredicted RBP10.04□□□□□ -0.8
RIF1-208ENST00000457745 PCDHA7Q9UN72 937 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 PCDHA4Q9UN74 947 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 KIF3AQ9Y496 699 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 USP17L15C9J2P7 530 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USP17L13C9JLJ4 530 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USP17L11C9JVI0 530 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USP17L18D6R9N7 530 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USP17L22D6RA61 530 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USP17L17D6RBQ6 530 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USP17L19D6RCP7 530 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USP17L20D6RJB6 530 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 CLK2P49760 499 aaKnown RBP10.03□□□□□ -0.8
RIF1-208ENST00000457745 BACE1P56817 501 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USP17L24Q0WX57 530 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 TRIM29Q14134 588 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 ZNF174Q15697 407 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 INF2Q27J81 1249 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 SUPT20HL1Q3ZLR7 823 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USH1GQ495M9 461 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USP17L6PQ6QN14 398 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 USP49Q70CQ1 688 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 C4orf32Q8N8J7 132 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 ZNF280CQ8ND82 737 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 REPS2Q8NFH8 660 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 KIFC2Q96AC6 838 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 ATG4CQ96DT6 458 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 SPATA32Q96LK8 384 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 AGBL1Q96MI9 1066 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 TMEM60Q9H2L4 133 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 RPAP3Q9H6T3 665 aaPredicted RBP10.03□□□□□ -0.8
RIF1-208ENST00000457745 ZNF408Q9H9D4 720 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 GOPCQ9HD26 462 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
RIF1-208ENST00000457745 SYNPO2Q9UMS6 1093 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 RBBP6Q7Z6E9 1792 aaKnown RBP10.03□□□□□ -0.8
RIF1-208ENST00000457745 ELP1O95163 1332 aa10.03□□□□□ -0.8
RIF1-208ENST00000457745 ESYT2A0FGR8 921 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 IQCA1LA6NCM1 817 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 MEIS2O14770 477 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 IRF6O14896 467 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 MAP3K11Q16584 847 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 KLHL40Q2TBA0 621 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 SPECC1Q5M775 1068 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 LDLRAD1Q5T700 205 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 CAVIN1Q6NZI2 390 aaKnown RBP10.02□□□□□ -0.81
RIF1-208ENST00000457745 SHC4Q6S5L8 630 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 GAS2L3Q86XJ1 694 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 C12orf42Q96LP6 360 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 POLR3EQ9NVU0 708 aa10.02□□□□□ -0.81
RIF1-208ENST00000457745 FBXO2Q9UK22 296 aaPredicted RBP10.02□□□□□ -0.81
RIF1-208ENST00000457745 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 WDR46O15213 610 aaKnown RBP10.01□□□□□ -0.81
RIF1-208ENST00000457745 SPTLC2O15270 562 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 TDP2O95551 362 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 YEATS4O95619 227 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 ITGBL1O95965 494 aaPredicted RBP10.01□□□□□ -0.81
RIF1-208ENST00000457745 HOXA13P31271 388 aaPredicted RBP10.01□□□□□ -0.81
RIF1-208ENST00000457745 ADCY7P51828 1080 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 STAT2P52630 851 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 IKQ13123 557 aaPredicted RBP10.01□□□□□ -0.81
RIF1-208ENST00000457745 SLC39A14Q15043 492 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 STK38Q15208 465 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 MUM1L1Q5H9M0 696 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 PPP4R3BQ5MIZ7 849 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 TTC38Q5R3I4 469 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 CST9Q5W186 159 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 LRRC15Q8TF66 581 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 CLEC4DQ8WXI8 215 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 GJA10Q969M2 543 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 ZNF396Q96N95 335 aaPredicted RBP10.01□□□□□ -0.81
RIF1-208ENST00000457745 PURBQ96QR8 312 aaKnown RBP10.01□□□□□ -0.81
RIF1-208ENST00000457745 UIMC1Q96RL1 719 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 RAVER2Q9HCJ3 691 aaKnown RBP10.01□□□□□ -0.81
RIF1-208ENST00000457745 RIC8AQ9NPQ8 531 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 PICK1Q9NRD5 415 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 GINM1Q9NU53 330 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 COL20A1Q9P218 1284 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 SEC63Q9UGP8 760 aaKnown RBP10.01□□□□□ -0.81
RIF1-208ENST00000457745 RIPK3Q9Y572 518 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 PCDHA1Q9Y5I3 950 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 ATP6V1DQ9Y5K8 247 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 DDX49Q9Y6V7 483 aaKnown RBP10.01□□□□□ -0.81
RIF1-208ENST00000457745 TRPM7Q96QT4 1865 aa10.01□□□□□ -0.81
RIF1-208ENST00000457745 A0A087WWV3 80 aa10□□□□□ -0.81
RIF1-208ENST00000457745 A0A087X0B3 334 aa10□□□□□ -0.81
RIF1-208ENST00000457745 NFIBO00712 420 aa10□□□□□ -0.81
RIF1-208ENST00000457745 SLC37A4O43826 429 aa10□□□□□ -0.81
RIF1-208ENST00000457745 PLA2G6O60733 806 aa10□□□□□ -0.81
RIF1-208ENST00000457745 NR1I2O75469 434 aa10□□□□□ -0.81
RIF1-208ENST00000457745 UBE2HP62256 183 aa10□□□□□ -0.81
RIF1-208ENST00000457745 GNL2Q13823 731 aaKnown RBP10□□□□□ -0.81
RIF1-208ENST00000457745 SAFBQ15424 915 aaKnown RBP eCLIP10□□□□□ -0.81
RIF1-208ENST00000457745 SH3D19Q5HYK7 790 aa10□□□□□ -0.81
RIF1-208ENST00000457745 SLC30A10Q6XR72 485 aa10□□□□□ -0.81
RIF1-208ENST00000457745 PNMA8AQ86V59 439 aaPredicted RBP10□□□□□ -0.81
RIF1-208ENST00000457745 LDHDQ86WU2 507 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms