RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 SLC35F4A4IF30 521 aa9.95□□□□□ -0.82
LINC01888-202ENST00000457602 ERVK-24P63145 666 aa9.95□□□□□ -0.82
LINC01888-202ENST00000457602 TTF1Q15361 905 aaPredicted RBP9.95□□□□□ -0.82
LINC01888-202ENST00000457602 ABCB5Q2M3G0 1257 aa9.95□□□□□ -0.82
LINC01888-202ENST00000457602 CERKLQ49MI3 558 aaPredicted RBP9.95□□□□□ -0.82
LINC01888-202ENST00000457602 TATDN1Q6P1N9 297 aa9.95□□□□□ -0.82
LINC01888-202ENST00000457602 NECAB2Q7Z6G3 386 aa9.95□□□□□ -0.82
LINC01888-202ENST00000457602 RHPN1Q8TCX5 695 aa9.95□□□□□ -0.82
LINC01888-202ENST00000457602 DIS3LQ8TF46 1054 aaKnown RBP9.95□□□□□ -0.82
LINC01888-202ENST00000457602 GTF3C2Q8WUA4 911 aaPredicted RBP9.95□□□□□ -0.82
LINC01888-202ENST00000457602 SOCS4Q8WXH5 440 aa9.95□□□□□ -0.82
LINC01888-202ENST00000457602 TRIB2Q92519 343 aa9.95□□□□□ -0.82
LINC01888-202ENST00000457602 DNAJC2Q99543 621 aaKnown RBP9.95□□□□□ -0.82
LINC01888-202ENST00000457602 CABP5Q9NP86 173 aa9.95□□□□□ -0.82
LINC01888-202ENST00000457602 ZBED9Q6R2W3 1325 aa9.95□□□□□ -0.82
LINC01888-202ENST00000457602 CDK5RAP2Q96SN8 1893 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 FOCADQ5VW36 1801 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 USP17L15C9J2P7 530 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 USP17L13C9JLJ4 530 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 USP17L11C9JVI0 530 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 USP17L18D6R9N7 530 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 USP17L22D6RA61 530 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 USP17L17D6RBQ6 530 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 USP17L19D6RCP7 530 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 USP17L20D6RJB6 530 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 HMMRO75330 724 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 IFIT2P09913 472 aaKnown RBP9.94□□□□□ -0.82
LINC01888-202ENST00000457602 ZKSCAN1P17029 563 aaPredicted RBP9.94□□□□□ -0.82
LINC01888-202ENST00000457602 MAPK4P31152 587 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 GMPRP36959 345 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 USP14P54578 494 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 USP17L24Q0WX57 530 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 CLN3Q13286 438 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 SLFNL1Q499Z3 407 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 SLC9C2Q5TAH2 1124 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 WDR78Q5VTH9 848 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 TMED8Q6PL24 325 aaPredicted RBP9.94□□□□□ -0.82
LINC01888-202ENST00000457602 RNF135Q8IUD6 432 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 KIF1BPQ96EK5 621 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 EHD4Q9H223 541 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 RBPJLQ9UBG7 517 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 DOCK3Q8IZD9 2030 aa9.94□□□□□ -0.82
LINC01888-202ENST00000457602 GOLIM4O00461 696 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 MPHOSPH10O00566 681 aaKnown RBP9.93□□□□□ -0.82
LINC01888-202ENST00000457602 XRCC5P13010 732 aaKnown RBP9.93□□□□□ -0.82
LINC01888-202ENST00000457602 PDE6AP16499 860 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 GPC1P35052 558 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 RGS2P41220 211 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 PLCD1P51178 756 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 GPR142Q7Z601 462 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 PLEKHH3Q7Z736 793 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 C7orf61Q8IZ16 206 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 CCDC155Q8N6L0 562 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 ACER1Q8TDN7 264 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 C12orf42Q96LP6 360 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 RIOK1Q9BRS2 568 aaKnown RBP9.93□□□□□ -0.82
LINC01888-202ENST00000457602 CRNKL1Q9BZJ0 848 aaKnown RBP9.93□□□□□ -0.82
LINC01888-202ENST00000457602 PORCNQ9H237 461 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 ALG2Q9H553 416 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 MCM9Q9NXL9 1143 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 DOLKQ9UPQ8 538 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 MYH1P12882 1939 aa9.93□□□□□ -0.82
LINC01888-202ENST00000457602 ZNF532Q9HCE3 1301 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 GLRX3O76003 335 aaKnown RBP9.92□□□□□ -0.82
LINC01888-202ENST00000457602 VCAM1P19320 739 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 SHMT1P34896 483 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 CCNA1P78396 465 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 SEPT2Q15019 361 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 CATSPERGQ6ZRH7 1159 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 RPAP2Q8IXW5 612 aaPredicted RBP9.92□□□□□ -0.82
LINC01888-202ENST00000457602 SDR42E1Q8WUS8 393 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 KIAA1683Q9H0B3 1180 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 C11orf49Q9H6J7 331 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 ARHGEF10LQ9HCE6 1279 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 STAP2Q9UGK3 403 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 DDX19BQ9UMR2 479 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 RABGAP1Q9Y3P9 1069 aa9.92□□□□□ -0.82
LINC01888-202ENST00000457602 CACNB2Q08289 660 aaPredicted RBP9.91□□□□□ -0.82
LINC01888-202ENST00000457602 SEMA3FQ13275 785 aa9.91□□□□□ -0.82
LINC01888-202ENST00000457602 CCL14Q16627 93 aa9.91□□□□□ -0.82
LINC01888-202ENST00000457602 MAP3K21Q5TCX8 1036 aa9.91□□□□□ -0.82
LINC01888-202ENST00000457602 LYSMD3Q7Z3D4 306 aa9.91□□□□□ -0.82
LINC01888-202ENST00000457602 LCORLQ8N3X6 602 aa9.91□□□□□ -0.82
LINC01888-202ENST00000457602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.91□□□□□ -0.82
LINC01888-202ENST00000457602 EDC3Q96F86 508 aaKnown RBP9.91□□□□□ -0.82
LINC01888-202ENST00000457602 APBA2Q99767 749 aa9.91□□□□□ -0.82
LINC01888-202ENST00000457602 BOLA2Q9H3K6 86 aa9.91□□□□□ -0.82
LINC01888-202ENST00000457602 CHMP4BQ9H444 224 aaKnown RBP9.91□□□□□ -0.82
LINC01888-202ENST00000457602 RPAP3Q9H6T3 665 aaPredicted RBP9.91□□□□□ -0.82
LINC01888-202ENST00000457602 OGDHLQ9ULD0 1010 aa9.91□□□□□ -0.82
LINC01888-202ENST00000457602 ZMYND8Q9ULU4 1186 aaPredicted RBP9.91□□□□□ -0.82
LINC01888-202ENST00000457602 IVNS1ABPQ9Y6Y0 642 aa9.91□□□□□ -0.82
LINC01888-202ENST00000457602 MEN1O00255 615 aa9.9□□□□□ -0.82
LINC01888-202ENST00000457602 PIK3CDO00329 1044 aa9.9□□□□□ -0.82
LINC01888-202ENST00000457602 RAD21O60216 631 aa9.9□□□□□ -0.82
LINC01888-202ENST00000457602 RAB11FIP3O75154 756 aa9.9□□□□□ -0.82
LINC01888-202ENST00000457602 CNMDO75829 334 aa9.9□□□□□ -0.82
LINC01888-202ENST00000457602 CYP2D6P10635 497 aa9.9□□□□□ -0.82
LINC01888-202ENST00000457602 SYN1P17600 705 aa9.9□□□□□ -0.82
LINC01888-202ENST00000457602 CCND3P30281 292 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms