RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 ESR2Q92731 530 aa14.59□□□□□ -0.07
SMCR2-201ENST00000456090 BADQ92934 168 aa14.59□□□□□ -0.07
SMCR2-201ENST00000456090 KATNBL1Q9H079 304 aa14.59□□□□□ -0.07
SMCR2-201ENST00000456090 STARD7Q9NQZ5 370 aa14.59□□□□□ -0.07
SMCR2-201ENST00000456090 CYP39A1Q9NYL5 469 aa14.59□□□□□ -0.07
SMCR2-201ENST00000456090 TRIM43BA6NCK2 446 aa14.58□□□□□ -0.08
SMCR2-201ENST00000456090 ASB14A6NK59 587 aa14.58□□□□□ -0.08
SMCR2-201ENST00000456090 CLTBP09497 229 aa14.58□□□□□ -0.08
SMCR2-201ENST00000456090 CCSAPQ6IQ19 270 aaPredicted RBP14.58□□□□□ -0.08
SMCR2-201ENST00000456090 NSMFQ6X4W1 530 aa14.58□□□□□ -0.08
SMCR2-201ENST00000456090 NUP133Q8WUM0 1156 aa14.58□□□□□ -0.08
SMCR2-201ENST00000456090 TRIM43Q96BQ3 446 aaPredicted RBP14.58□□□□□ -0.08
SMCR2-201ENST00000456090 TTC14Q96N46 770 aa14.58□□□□□ -0.08
SMCR2-201ENST00000456090 ZKSCAN3Q9BRR0 538 aa14.58□□□□□ -0.08
SMCR2-201ENST00000456090 SPC25Q9HBM1 224 aa14.58□□□□□ -0.08
SMCR2-201ENST00000456090 DDX49Q9Y6V7 483 aaKnown RBP14.58□□□□□ -0.08
SMCR2-201ENST00000456090 ASTN1O14525 1302 aa14.58□□□□□ -0.08
SMCR2-201ENST00000456090 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.57□□□□□ -0.08
SMCR2-201ENST00000456090 CST5P28325 142 aaPredicted RBP14.57□□□□□ -0.08
SMCR2-201ENST00000456090 GJA9P57773 515 aa14.57□□□□□ -0.08
SMCR2-201ENST00000456090 ZNF543Q08ER8 600 aa14.57□□□□□ -0.08
SMCR2-201ENST00000456090 NOL8Q76FK4 1167 aaKnown RBP14.57□□□□□ -0.08
SMCR2-201ENST00000456090 Q7L0L9 218 aa14.57□□□□□ -0.08
SMCR2-201ENST00000456090 DEFB123Q8N688 67 aa14.57□□□□□ -0.08
SMCR2-201ENST00000456090 PCSK9Q8NBP7 692 aaKnown RBP14.57□□□□□ -0.08
SMCR2-201ENST00000456090 UPF3AQ9H1J1 476 aaKnown RBP14.57□□□□□ -0.08
SMCR2-201ENST00000456090 PRUNE2Q8WUY3 3088 aa14.57□□□□□ -0.08
SMCR2-201ENST00000456090 NFIBO00712 420 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 KDM4AO75164 1064 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 ASGR1P07306 291 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 SNHG28P0DPA3 235 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 ITGB8P26012 769 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 PDE4AP27815 886 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
SMCR2-201ENST00000456090 TNFAIP2Q03169 654 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 GNASQ5JWF2 1037 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 EEPD1Q7L9B9 569 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 ANKRD33Q7Z3H0 272 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 FBXO16Q8IX29 292 aaPredicted RBP14.56□□□□□ -0.08
SMCR2-201ENST00000456090 GLT1D1Q96MS3 346 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 PURBQ96QR8 312 aaKnown RBP14.56□□□□□ -0.08
SMCR2-201ENST00000456090 DSCC1Q9BVC3 393 aa14.56□□□□□ -0.08
SMCR2-201ENST00000456090 BAZ2BQ9UIF8 2168 aaKnown RBP14.56□□□□□ -0.08
SMCR2-201ENST00000456090 VCANP13611 3396 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 KIAA1217Q5T5P2 1943 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 B4E1Z4 1266 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 NT5C2P49902 561 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 FAAP100Q0VG06 881 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 BAATQ14032 418 aaPredicted RBP14.55□□□□□ -0.08
SMCR2-201ENST00000456090 IMMTQ16891 758 aaKnown RBP14.55□□□□□ -0.08
SMCR2-201ENST00000456090 DGKHQ86XP1 1220 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 VTI1AQ96AJ9 217 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 TOX2Q96NM4 488 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 IL25Q9H293 177 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 TMEM39AQ9NV64 488 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 ELP1O95163 1332 aa14.55□□□□□ -0.08
SMCR2-201ENST00000456090 DCDC2CA8MYV0 355 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 KIAA0355O15063 1070 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 CTAGE5O15320 804 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 GOLGA8HP0CJ92 632 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 GSPT1P15170 499 aaKnown RBP14.54□□□□□ -0.08
SMCR2-201ENST00000456090 RAG1P15918 1043 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 BEX3Q00994 111 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 SHHQ15465 462 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 C9orf50Q5SZB4 431 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 GPATCH4Q5T3I0 446 aaKnown RBP14.54□□□□□ -0.08
SMCR2-201ENST00000456090 TTC22Q5TAA0 569 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 TLK2Q86UE8 772 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 PNMA1Q8ND90 353 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 ZSCAN10Q96SZ4 725 aaPredicted RBP14.54□□□□□ -0.08
SMCR2-201ENST00000456090 KAT14Q9H8E8 782 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 PDGFCQ9NRA1 345 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 CTNNA3Q9UI47 895 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 GNEQ9Y223 722 aaKnown RBP14.54□□□□□ -0.08
SMCR2-201ENST00000456090 MROH7Q68CQ1 1323 aa14.54□□□□□ -0.08
SMCR2-201ENST00000456090 MYO9BQ13459 2157 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 MYH7BA7E2Y1 1941 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 A0A0U1RQG5 324 aaPredicted RBP14.53□□□□□ -0.08
SMCR2-201ENST00000456090 SMPD1P17405 629 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 PTGS1P23219 599 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 CALML3P27482 149 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 ALDH5A1P51649 535 aaPredicted RBP14.53□□□□□ -0.08
SMCR2-201ENST00000456090 CCDC178Q5BJE1 867 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 TAPT1Q6NXT6 567 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 SLC30A10Q6XR72 485 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 ENAHQ8N8S7 591 aaPredicted RBP14.53□□□□□ -0.08
SMCR2-201ENST00000456090 CLEC4DQ8WXI8 215 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 UBA5Q9GZZ9 404 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 CPVLQ9H3G5 476 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 VTA1Q9NP79 307 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 ZSWIM5Q9P217 1185 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 ADD3Q9UEY8 706 aaKnown RBP14.53□□□□□ -0.08
SMCR2-201ENST00000456090 PNMA2Q9UL42 364 aa14.53□□□□□ -0.08
SMCR2-201ENST00000456090 TNKSO95271 1327 aa14.52□□□□□ -0.08
SMCR2-201ENST00000456090 WDR19Q8NEZ3 1342 aa14.52□□□□□ -0.08
SMCR2-201ENST00000456090 ARVCFO00192 962 aa14.52□□□□□ -0.09
SMCR2-201ENST00000456090 CDK7P50613 346 aa14.52□□□□□ -0.09
SMCR2-201ENST00000456090 NKX3-2P78367 333 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms