RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 DDX49Q9Y6V7 483 aaKnown RBP22.16■■□□□ 1.14
COL20A1-204ENST00000455906 A0A0D9SFI3 127 aa22.15■■□□□ 1.14
COL20A1-204ENST00000455906 A0A0U1RQG5 324 aaPredicted RBP22.15■■□□□ 1.14
COL20A1-204ENST00000455906 ASB14A6NK59 587 aa22.15■■□□□ 1.14
COL20A1-204ENST00000455906 FGAP02671 866 aa22.15■■□□□ 1.14
COL20A1-204ENST00000455906 BEX3Q00994 111 aa22.15■■□□□ 1.14
COL20A1-204ENST00000455906 TNFAIP2Q03169 654 aa22.15■■□□□ 1.14
COL20A1-204ENST00000455906 MFSD5Q6N075 450 aa22.15■■□□□ 1.14
COL20A1-204ENST00000455906 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.15■■□□□ 1.14
COL20A1-204ENST00000455906 FAM126BQ8IXS8 530 aa22.15■■□□□ 1.14
COL20A1-204ENST00000455906 CYP39A1Q9NYL5 469 aa22.15■■□□□ 1.14
COL20A1-204ENST00000455906 ZBTB47Q9UFB7 747 aaPredicted RBP22.15■■□□□ 1.14
COL20A1-204ENST00000455906 MTMR7Q9Y216 660 aa22.15■■□□□ 1.14
COL20A1-204ENST00000455906 PTGS1P23219 599 aa22.14■■□□□ 1.13
COL20A1-204ENST00000455906 DCAF4Q8WV16 495 aa22.14■■□□□ 1.13
COL20A1-204ENST00000455906 MYLIPQ8WY64 445 aa22.14■■□□□ 1.13
COL20A1-204ENST00000455906 VTI1AQ96AJ9 217 aa22.14■■□□□ 1.13
COL20A1-204ENST00000455906 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.14■■□□□ 1.13
COL20A1-204ENST00000455906 RANBP17Q9H2T7 1088 aaKnown RBP22.14■■□□□ 1.13
COL20A1-204ENST00000455906 ICAM1P05362 532 aa22.13■■□□□ 1.13
COL20A1-204ENST00000455906 CCDC96Q2M329 555 aa22.13■■□□□ 1.13
COL20A1-204ENST00000455906 MCMDC2Q4G0Z9 681 aa22.13■■□□□ 1.13
COL20A1-204ENST00000455906 TTBK2Q6IQ55 1244 aa22.13■■□□□ 1.13
COL20A1-204ENST00000455906 TAPT1Q6NXT6 567 aa22.13■■□□□ 1.13
COL20A1-204ENST00000455906 BTNL9Q6UXG8 535 aa22.13■■□□□ 1.13
COL20A1-204ENST00000455906 C16orf59Q7L2K0 433 aa22.13■■□□□ 1.13
COL20A1-204ENST00000455906 ZNF589Q86UQ0 364 aaPredicted RBP22.13■■□□□ 1.13
COL20A1-204ENST00000455906 PURBQ96QR8 312 aaKnown RBP22.13■■□□□ 1.13
COL20A1-204ENST00000455906 CCPG1Q9ULG6 757 aa22.13■■□□□ 1.13
COL20A1-204ENST00000455906 ZMYM6O95789 1325 aa22.12■■□□□ 1.13
COL20A1-204ENST00000455906 TMEM265A0A087WTH1 108 aa22.12■■□□□ 1.13
COL20A1-204ENST00000455906 HSPD1P10809 573 aaKnown RBP22.12■■□□□ 1.13
COL20A1-204ENST00000455906 SMPD1P17405 629 aa22.12■■□□□ 1.13
COL20A1-204ENST00000455906 CXCL17Q6UXB2 119 aa22.12■■□□□ 1.13
COL20A1-204ENST00000455906 TLK2Q86UE8 772 aa22.12■■□□□ 1.13
COL20A1-204ENST00000455906 TICAM2Q86XR7 235 aa22.12■■□□□ 1.13
COL20A1-204ENST00000455906 SLC43A3Q8NBI5 491 aa22.12■■□□□ 1.13
COL20A1-204ENST00000455906 TMEM47Q9BQJ4 181 aa22.12■■□□□ 1.13
COL20A1-204ENST00000455906 PDGFCQ9NRA1 345 aa22.12■■□□□ 1.13
COL20A1-204ENST00000455906 CHD9Q3L8U1 2897 aa22.11■■□□□ 1.13
COL20A1-204ENST00000455906 CD4P01730 458 aa22.11■■□□□ 1.13
COL20A1-204ENST00000455906 TOP1P11387 765 aaKnown RBP22.11■■□□□ 1.13
COL20A1-204ENST00000455906 SLC16A2P36021 539 aa22.11■■□□□ 1.13
COL20A1-204ENST00000455906 TMEM63BQ5T3F8 832 aa22.11■■□□□ 1.13
COL20A1-204ENST00000455906 NSMFQ6X4W1 530 aa22.11■■□□□ 1.13
COL20A1-204ENST00000455906 NOL8Q76FK4 1167 aaKnown RBP22.11■■□□□ 1.13
COL20A1-204ENST00000455906 FBXO16Q8IX29 292 aaPredicted RBP22.11■■□□□ 1.13
COL20A1-204ENST00000455906 MAFAQ8NHW3 353 aaPredicted RBP22.11■■□□□ 1.13
COL20A1-204ENST00000455906 MORC4Q8TE76 937 aa22.11■■□□□ 1.13
COL20A1-204ENST00000455906 COL25A1Q9BXS0 654 aaPredicted RBP22.11■■□□□ 1.13
COL20A1-204ENST00000455906 TOMM22Q9NS69 142 aa22.11■■□□□ 1.13
COL20A1-204ENST00000455906 TCP11L1Q9NUJ3 509 aa22.11■■□□□ 1.13
COL20A1-204ENST00000455906 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.1■■□□□ 1.13
COL20A1-204ENST00000455906 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.1■■□□□ 1.13
COL20A1-204ENST00000455906 CSF2RAP15509 400 aa22.1■■□□□ 1.13
COL20A1-204ENST00000455906 NMIQ13287 307 aaPredicted RBP22.1■■□□□ 1.13
COL20A1-204ENST00000455906 PPIGQ13427 754 aaKnown RBP eCLIP22.1■■□□□ 1.13
COL20A1-204ENST00000455906 FSCN1Q16658 493 aaKnown RBP22.1■■□□□ 1.13
COL20A1-204ENST00000455906 RRP12Q5JTH9 1297 aaKnown RBP22.1■■□□□ 1.13
COL20A1-204ENST00000455906 TMEM240Q5SV17 173 aa22.1■■□□□ 1.13
COL20A1-204ENST00000455906 RASIP1Q5U651 963 aa22.1■■□□□ 1.13
COL20A1-204ENST00000455906 SYDE2Q5VT97 1194 aa22.1■■□□□ 1.13
COL20A1-204ENST00000455906 EEPD1Q7L9B9 569 aa22.1■■□□□ 1.13
COL20A1-204ENST00000455906 PPP1R12CQ9BZL4 782 aa22.1■■□□□ 1.13
COL20A1-204ENST00000455906 GRIN2DO15399 1336 aa22.09■■□□□ 1.13
COL20A1-204ENST00000455906 TLR3O15455 904 aaKnown RBP22.09■■□□□ 1.13
COL20A1-204ENST00000455906 DYNC1LI2O43237 492 aaPredicted RBP22.09■■□□□ 1.13
COL20A1-204ENST00000455906 DNAJB2P25686 324 aa22.09■■□□□ 1.13
COL20A1-204ENST00000455906 IQSEC1Q6DN90 963 aa22.09■■□□□ 1.13
COL20A1-204ENST00000455906 FRMPD2Q68DX3 1309 aaPredicted RBP22.08■■□□□ 1.13
COL20A1-204ENST00000455906 NFIBO00712 420 aa22.08■■□□□ 1.13
COL20A1-204ENST00000455906 CABYRO75952 493 aa22.08■■□□□ 1.13
COL20A1-204ENST00000455906 PDHBP11177 359 aa22.08■■□□□ 1.13
COL20A1-204ENST00000455906 HAND2P61296 217 aa22.08■■□□□ 1.13
COL20A1-204ENST00000455906 BAATQ14032 418 aaPredicted RBP22.08■■□□□ 1.13
COL20A1-204ENST00000455906 TMEM199Q8N511 208 aa22.08■■□□□ 1.13
COL20A1-204ENST00000455906 LNPKQ9C0E8 428 aa22.08■■□□□ 1.13
COL20A1-204ENST00000455906 AP5M1Q9H0R1 490 aa22.08■■□□□ 1.13
COL20A1-204ENST00000455906 VTA1Q9NP79 307 aa22.08■■□□□ 1.13
COL20A1-204ENST00000455906 GPCPD1Q9NPB8 672 aa22.08■■□□□ 1.13
COL20A1-204ENST00000455906 Q9Y3F1 56 aa22.08■■□□□ 1.13
COL20A1-204ENST00000455906 CCDC171Q6TFL3 1326 aa22.07■■□□□ 1.12
COL20A1-204ENST00000455906 FOSL2P15408 326 aa22.07■■□□□ 1.12
COL20A1-204ENST00000455906 ITGA7Q13683 1181 aa22.07■■□□□ 1.12
COL20A1-204ENST00000455906 GRIN2CQ14957 1233 aa22.07■■□□□ 1.12
COL20A1-204ENST00000455906 ACRP10323 421 aa22.06■■□□□ 1.12
COL20A1-204ENST00000455906 CYP2C18P33260 490 aa22.06■■□□□ 1.12
COL20A1-204ENST00000455906 ALDH5A1P51649 535 aaPredicted RBP22.06■■□□□ 1.12
COL20A1-204ENST00000455906 AKNAD1Q5T1N1 836 aa22.06■■□□□ 1.12
COL20A1-204ENST00000455906 KIAA1211Q6ZU35 1233 aa22.06■■□□□ 1.12
COL20A1-204ENST00000455906 ZNF365Q70YC5 407 aa22.06■■□□□ 1.12
COL20A1-204ENST00000455906 TBC1D10CQ8IV04 446 aa22.06■■□□□ 1.12
COL20A1-204ENST00000455906 CLEC4DQ8WXI8 215 aa22.06■■□□□ 1.12
COL20A1-204ENST00000455906 UMODL1Q5DID0 1318 aa22.06■■□□□ 1.12
COL20A1-204ENST00000455906 TRIM6-TRIM34B2RNG4 842 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 ZEB2O60315 1214 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 SNHG28P0DPA3 235 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 ZNF543Q08ER8 600 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 DUSP28Q4G0W2 176 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 PSRC1Q6PGN9 363 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms