RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 EPS15P42566 896 aa5□□□□□ -1.61
RBM39-220ENST00000455343 ST5P78524 1137 aa5□□□□□ -1.61
RBM39-220ENST00000455343 MTHFSDQ2M296 383 aaKnown RBP5□□□□□ -1.61
RBM39-220ENST00000455343 ZNF790Q6PG37 636 aa5□□□□□ -1.61
RBM39-220ENST00000455343 USP50Q70EL3 339 aaPredicted RBP5□□□□□ -1.61
RBM39-220ENST00000455343 CBLL1Q75N03 491 aa5□□□□□ -1.61
RBM39-220ENST00000455343 SYNE4Q8N205 404 aa5□□□□□ -1.61
RBM39-220ENST00000455343 CCER1Q8TC90 406 aaPredicted RBP5□□□□□ -1.61
RBM39-220ENST00000455343 EPS8L3Q8TE67 593 aaKnown RBP5□□□□□ -1.61
RBM39-220ENST00000455343 CCDC86Q9H6F5 360 aaKnown RBP5□□□□□ -1.61
RBM39-220ENST00000455343 ZC3H7BQ9UGR2 993 aaKnown RBP5□□□□□ -1.61
RBM39-220ENST00000455343 DLEC1Q9Y238 1755 aa5□□□□□ -1.61
RBM39-220ENST00000455343 FER1L6Q2WGJ9 1857 aa5□□□□□ -1.61
RBM39-220ENST00000455343 THSD7BQ9C0I4 1608 aa5□□□□□ -1.61
RBM39-220ENST00000455343 HEG1Q9ULI3 1381 aa5□□□□□ -1.61
RBM39-220ENST00000455343 TRAF5O00463 557 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 ZNF862O60290 1169 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 A1BGP04217 495 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 ALDH1B1P30837 517 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 ZNF157P51786 506 aaPredicted RBP4.99□□□□□ -1.61
RBM39-220ENST00000455343 CRY2Q49AN0 593 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 TPTE2Q6XPS3 522 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 TP53INP2Q8IXH6 220 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 FLCNQ8NFG4 579 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 IL17REQ8NFR9 667 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 JDP2Q8WYK2 163 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 WDR89Q96FK6 387 aaPredicted RBP4.99□□□□□ -1.61
RBM39-220ENST00000455343 ARID3AQ99856 593 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 ZC3H12CQ9C0D7 883 aaKnown RBP4.99□□□□□ -1.61
RBM39-220ENST00000455343 LRRC4CQ9HCJ2 640 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 CRIM1Q9NZV1 1036 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 SCN4AP35499 1836 aa4.99□□□□□ -1.61
RBM39-220ENST00000455343 AFDNP55196 1824 aaKnown RBP4.99□□□□□ -1.61
RBM39-220ENST00000455343 MKI67P46013 3256 aaKnown RBP4.98□□□□□ -1.61
RBM39-220ENST00000455343 KIF20BQ96Q89 1820 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 SOWAHDA6NJG2 315 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 GSTP1P09211 210 aaKnown RBP4.98□□□□□ -1.61
RBM39-220ENST00000455343 EIF6P56537 245 aaKnown RBP4.98□□□□□ -1.61
RBM39-220ENST00000455343 ID3Q02535 119 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 PDE4CQ08493 712 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 NOGQ13253 232 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 GRM1Q13255 1194 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 COL19A1Q14993 1142 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 KIF4BQ2VIQ3 1234 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 CIAPIN1Q6FI81 312 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 OGFOD3Q6PK18 319 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 PI16Q6UXB8 463 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 DTHD1Q6ZMT9 781 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 TMC7Q7Z402 723 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 NBPF5PQ86XG9 351 aaPredicted RBP4.98□□□□□ -1.61
RBM39-220ENST00000455343 TTC5Q8N0Z6 440 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 FANCD2OSQ96PS1 177 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 ATXN3LQ9H3M9 355 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 PANK3Q9H999 370 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 PAK6Q9NQU5 681 aaPredicted RBP4.98□□□□□ -1.61
RBM39-220ENST00000455343 KRT82Q9NSB4 513 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 PCDHGC5Q9Y5F6 944 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 USP16Q9Y5T5 823 aa4.98□□□□□ -1.61
RBM39-220ENST00000455343 SLX4Q8IY92 1834 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 ANKRD31Q8N7Z5 1873 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 COL4A5P29400 1685 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 CEMIPQ8WUJ3 1361 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 BTBD11A6QL63 1104 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 NPHP1O15259 732 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 CELF2O95319 508 aaKnown RBP4.97□□□□□ -1.61
RBM39-220ENST00000455343 HMOX1P09601 288 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 FCGRTP55899 365 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 HNRNPUQ00839 825 aaKnown RBP eCLIP4.97□□□□□ -1.61
RBM39-220ENST00000455343 PDZD3Q86UT5 571 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 MORC1Q86VD1 984 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 WFDC3Q8IUB2 231 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 AGBL5Q8NDL9 886 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 VPS33BQ9H267 617 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 PIDD1Q9HB75 910 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 ADARB2Q9NS39 739 aaKnown RBP4.97□□□□□ -1.61
RBM39-220ENST00000455343 SAGE1Q9NXZ1 904 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 GPRC5DQ9NZD1 345 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 GPN3Q9UHW5 284 aaPredicted RBP4.97□□□□□ -1.61
RBM39-220ENST00000455343 DICER1Q9UPY3 1922 aaKnown RBP4.97□□□□□ -1.61
RBM39-220ENST00000455343 COL11A2P13942 1736 aaPredicted RBP4.97□□□□□ -1.61
RBM39-220ENST00000455343 LTBP1Q14766 1721 aa4.97□□□□□ -1.61
RBM39-220ENST00000455343 PRAMEF22A3QJZ6 481 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 FAM155AB1AL88 458 aaPredicted RBP4.96□□□□□ -1.62
RBM39-220ENST00000455343 KCNQ3O43525 872 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 SLFN14P0C7P3 912 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 XRCC5P13010 732 aaKnown RBP4.96□□□□□ -1.62
RBM39-220ENST00000455343 ITGB5P18084 799 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 SOX10P56693 466 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 PPP2R3AQ06190 1150 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 CXCL9Q07325 125 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 CDK5R2Q13319 367 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 CYP27C1Q4G0S4 372 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 CDC37L1Q7L3B6 337 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 NPM2Q86SE8 214 aaKnown RBP4.96□□□□□ -1.62
RBM39-220ENST00000455343 BCL7CQ8WUZ0 217 aaPredicted RBP4.96□□□□□ -1.62
RBM39-220ENST00000455343 GLIS2Q9BZE0 524 aaPredicted RBP4.96□□□□□ -1.62
RBM39-220ENST00000455343 DISC1Q9NRI5 854 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 TMEM39AQ9NV64 488 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms