RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 PRDM1O75626 825 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 CABYRO75952 493 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 CA3P07451 260 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 IKQ13123 557 aaPredicted RBP11.83□□□□□ -0.52
CLCN4-204ENST00000454850 TTLL4Q14679 1199 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 UBE3CQ15386 1083 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 KRT40Q6A162 431 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLCN4-204ENST00000454850 EEPD1Q7L9B9 569 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 DEFB128Q7Z7B8 93 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 FBXO16Q8IX29 292 aaPredicted RBP11.83□□□□□ -0.52
CLCN4-204ENST00000454850 RPUSD2Q8IZ73 545 aaKnown RBP11.83□□□□□ -0.52
CLCN4-204ENST00000454850 HAUS7Q99871 368 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 ACAD9Q9H845 621 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 PDGFCQ9NRA1 345 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 RNF146Q9NTX7 359 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 COG6Q9Y2V7 657 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 HCN4Q9Y3Q4 1203 aa11.83□□□□□ -0.52
CLCN4-204ENST00000454850 SCN10AQ9Y5Y9 1956 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 SOWAHBA6NEL2 793 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 ERC2O15083 957 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 ZEB2O60315 1214 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 CYP2C9P11712 490 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 SMPD1P17405 629 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 ATP5JP18859 108 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 HOXD11P31277 338 aaPredicted RBP11.82□□□□□ -0.52
CLCN4-204ENST00000454850 NKX3-2P78367 333 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 TMEM67Q5HYA8 995 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 TMEM63BQ5T3F8 832 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 FAM133AQ8N9E0 248 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 CEP95Q96GE4 821 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 AGBL1Q96MI9 1066 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 LRFN3Q9BTN0 628 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 EPHX3Q9H6B9 360 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 A1CFQ9NQ94 594 aaKnown RBP11.82□□□□□ -0.52
CLCN4-204ENST00000454850 GNEQ9Y223 722 aaKnown RBP11.82□□□□□ -0.52
CLCN4-204ENST00000454850 MTCH2Q9Y6C9 303 aa11.82□□□□□ -0.52
CLCN4-204ENST00000454850 IGKV6D-41A0A0C4DH26 115 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 EPOPA6NHQ4 379 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 ASB14A6NK59 587 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 TMEM232C9JQI7 657 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 BMP3P12645 472 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 ALAS1P13196 640 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 OAZ1P54368 228 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 SNAP25P60880 206 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 SBK1Q52WX2 424 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 SLFN13Q68D06 897 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 ARNTL2Q8WYA1 636 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 VWCEQ96DN2 955 aa11.81□□□□□ -0.52
CLCN4-204ENST00000454850 STRBPQ96SI9 672 aaKnown RBP11.81□□□□□ -0.52
CLCN4-204ENST00000454850 ALDH8A1Q9H2A2 487 aaPredicted RBP11.81□□□□□ -0.52
CLCN4-204ENST00000454850 TRMT13Q9NUP7 481 aaKnown RBP11.81□□□□□ -0.52
CLCN4-204ENST00000454850 FAM86C2PA6NEL3 165 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 GSG1L2A8MUP6 293 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 HMMRO75330 724 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 TTLL1O95922 423 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 TDO2P48775 406 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 STAT2P52630 851 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 TMEM31Q5JXX7 168 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 ZNF444Q8N0Y2 327 aaPredicted RBP11.8□□□□□ -0.52
CLCN4-204ENST00000454850 GMCL1P1Q8NEA9 526 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 PPP1R13LQ8WUF5 828 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 TRERF1Q96PN7 1200 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 MTMR4Q9NYA4 1195 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 TNKSO95271 1327 aa11.8□□□□□ -0.52
CLCN4-204ENST00000454850 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 RAB11FIP3O75154 756 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 ARHGEF15O94989 841 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 APPP05067 770 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 MYL3P08590 195 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 ACTN1P12814 892 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 MUM1L1Q5H9M0 696 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 TAPT1Q6NXT6 567 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 NSMFQ6X4W1 530 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 KIAA1211Q6ZU35 1233 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 SIRT2Q8IXJ6 389 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 PURBQ96QR8 312 aaKnown RBP11.79□□□□□ -0.52
CLCN4-204ENST00000454850 EPB41L4AQ9HCS5 686 aaPredicted RBP11.79□□□□□ -0.52
CLCN4-204ENST00000454850 COG5Q9UP83 839 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 ZNF536O15090 1300 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 WDFY4Q6ZS81 3184 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 SIP14410 1827 aa11.79□□□□□ -0.52
CLCN4-204ENST00000454850 PFKMP08237 780 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 TSPY3P0CV98 308 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 TSPY8P0CW00 308 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 FAM47CQ5HY64 1035 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 IQSEC1Q6DN90 963 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 SPRED2Q7Z698 418 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
CLCN4-204ENST00000454850 KHSRPQ92945 711 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLCN4-204ENST00000454850 HLA-CQ95604 372 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 OSBP2Q969R2 916 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 MKL1Q969V6 931 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 SEZ6LQ9BYH1 1024 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 FTOQ9C0B1 505 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLCN4-204ENST00000454850 CYP39A1Q9NYL5 469 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 MTMR7Q9Y216 660 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 TRIOO75962 3097 aa11.78□□□□□ -0.52
CLCN4-204ENST00000454850 TLL1O43897 1013 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms