RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 MAD2L2Q9UI95 211 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 CNPY2Q9Y2B0 182 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 SLC12A7Q9Y666 1083 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 ABCB11O95342 1321 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 IGHA2P01877 340 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 GNAQP50148 359 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 FGD1P98174 961 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 TRAF1Q13077 416 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 USH1GQ495M9 461 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 MUM1L1Q5H9M0 696 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 SYNE3Q6ZMZ3 975 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 STAG2Q8N3U4 1231 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 JAKMIP1Q96N16 626 aaKnown RBP18.03■□□□□ 0.48
VPS8-213ENST00000453056 LRRC2Q9BYS8 371 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 VAT1LQ9HCJ6 419 aa18.03■□□□□ 0.48
VPS8-213ENST00000453056 TAL1P17542 331 aaPredicted RBP18.02■□□□□ 0.48
VPS8-213ENST00000453056 PSMA5P28066 241 aa18.02■□□□□ 0.48
VPS8-213ENST00000453056 QRICH1Q2TAL8 776 aa18.02■□□□□ 0.48
VPS8-213ENST00000453056 BLOC1S2Q6QNY1 142 aa18.02■□□□□ 0.48
VPS8-213ENST00000453056 SGMS1Q86VZ5 419 aa18.02■□□□□ 0.48
VPS8-213ENST00000453056 FBXO11Q86XK2 927 aa18.02■□□□□ 0.48
VPS8-213ENST00000453056 FAM133AQ8N9E0 248 aa18.02■□□□□ 0.48
VPS8-213ENST00000453056 ANKLE1Q8NAG6 615 aa18.02■□□□□ 0.48
VPS8-213ENST00000453056 LZTS2Q9BRK4 669 aa18.02■□□□□ 0.48
VPS8-213ENST00000453056 JMJD4Q9H9V9 463 aa18.02■□□□□ 0.48
VPS8-213ENST00000453056 GPHNQ9NQX3 736 aaPredicted RBP18.02■□□□□ 0.48
VPS8-213ENST00000453056 CYP39A1Q9NYL5 469 aa18.02■□□□□ 0.48
VPS8-213ENST00000453056 DDX20Q9UHI6 824 aaKnown RBP18.02■□□□□ 0.48
VPS8-213ENST00000453056 LCTP09848 1927 aa18.02■□□□□ 0.47
VPS8-213ENST00000453056 PTPDC1A2A3K4 754 aa18.01■□□□□ 0.47
VPS8-213ENST00000453056 ASB14A6NK59 587 aa18.01■□□□□ 0.47
VPS8-213ENST00000453056 NFIBO00712 420 aa18.01■□□□□ 0.47
VPS8-213ENST00000453056 SEPT4O43236 478 aa18.01■□□□□ 0.47
VPS8-213ENST00000453056 ADCK5Q3MIX3 580 aa18.01■□□□□ 0.47
VPS8-213ENST00000453056 MAMDC4Q6UXC1 1216 aa18.01■□□□□ 0.47
VPS8-213ENST00000453056 MYL10Q9BUA6 226 aa18.01■□□□□ 0.47
VPS8-213ENST00000453056 AMNQ9BXJ7 453 aa18.01■□□□□ 0.47
VPS8-213ENST00000453056 ADD3Q9UEY8 706 aaKnown RBP18.01■□□□□ 0.47
VPS8-213ENST00000453056 MRPL11Q9Y3B7 192 aaKnown RBP18.01■□□□□ 0.47
VPS8-213ENST00000453056 SNX14Q9Y5W7 946 aa18.01■□□□□ 0.47
VPS8-213ENST00000453056 ZBTB5O15062 677 aa18■□□□□ 0.47
VPS8-213ENST00000453056 RNF207Q6ZRF8 634 aa18■□□□□ 0.47
VPS8-213ENST00000453056 MICU3Q86XE3 530 aa18■□□□□ 0.47
VPS8-213ENST00000453056 HOMER1Q86YM7 354 aa18■□□□□ 0.47
VPS8-213ENST00000453056 TRPV1Q8NER1 839 aa18■□□□□ 0.47
VPS8-213ENST00000453056 CLEC4DQ8WXI8 215 aa18■□□□□ 0.47
VPS8-213ENST00000453056 MPHOSPH6Q99547 160 aaKnown RBP18■□□□□ 0.47
VPS8-213ENST00000453056 MAF1Q9H063 256 aa18■□□□□ 0.47
VPS8-213ENST00000453056 OGDHLQ9ULD0 1010 aa18■□□□□ 0.47
VPS8-213ENST00000453056 EXOSC10Q01780 885 aaKnown RBP17.99■□□□□ 0.47
VPS8-213ENST00000453056 CNTN2Q02246 1040 aa17.99■□□□□ 0.47
VPS8-213ENST00000453056 BAATQ14032 418 aaPredicted RBP17.99■□□□□ 0.47
VPS8-213ENST00000453056 ARMCX2Q7L311 632 aa17.99■□□□□ 0.47
VPS8-213ENST00000453056 MCF2L2Q86YR7 1114 aa17.99■□□□□ 0.47
VPS8-213ENST00000453056 MTMR8Q96EF0 704 aa17.99■□□□□ 0.47
VPS8-213ENST00000453056 FGD4Q96M96 766 aa17.99■□□□□ 0.47
VPS8-213ENST00000453056 TCEANC2Q96MN5 208 aa17.99■□□□□ 0.47
VPS8-213ENST00000453056 SPZ1Q9BXG8 430 aa17.99■□□□□ 0.47
VPS8-213ENST00000453056 USP26Q9BXU7 913 aa17.99■□□□□ 0.47
VPS8-213ENST00000453056 RIOX1Q9H6W3 641 aa17.99■□□□□ 0.47
VPS8-213ENST00000453056 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.99■□□□□ 0.47
VPS8-213ENST00000453056 SEC63Q9UGP8 760 aaKnown RBP17.99■□□□□ 0.47
VPS8-213ENST00000453056 ZHX1Q9UKY1 873 aaPredicted RBP17.99■□□□□ 0.47
VPS8-213ENST00000453056 LOC102724159A0A0B4J2E5 919 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 AKR1A1P14550 325 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
VPS8-213ENST00000453056 CALML3P27482 149 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 COL9A3Q14050 684 aaPredicted RBP17.98■□□□□ 0.47
VPS8-213ENST00000453056 PWP2Q15269 919 aaKnown RBP17.98■□□□□ 0.47
VPS8-213ENST00000453056 PRAMEF19Q5SWL8 479 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 APOA5Q6Q788 366 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 SLC30A10Q6XR72 485 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 CCDC144CPQ8IYA2 1237 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 RGS22Q8NE09 1264 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 HTATIP2Q9BUP3 242 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 ABHD16BQ9H3Z7 469 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 LRRC37A2A6NM11 1700 aa17.98■□□□□ 0.47
VPS8-213ENST00000453056 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 B4DLN1 442 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 TNRC18O15417 2968 aaPredicted RBP17.97■□□□□ 0.47
VPS8-213ENST00000453056 ZBTB43O43298 467 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 RARBP10826 455 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 MRPL12P52815 198 aaKnown RBP17.97■□□□□ 0.47
VPS8-213ENST00000453056 RCAN1P53805 252 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 RPS6P62753 249 aaKnown RBP17.97■□□□□ 0.47
VPS8-213ENST00000453056 LHX8Q68G74 356 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 NECAB2Q7Z6G3 386 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 UBE2Q1Q7Z7E8 422 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 RRP36Q96EU6 259 aaKnown RBP17.97■□□□□ 0.47
VPS8-213ENST00000453056 PIGSQ96S52 555 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
VPS8-213ENST00000453056 PCDHA1Q9Y5I3 950 aa17.97■□□□□ 0.47
VPS8-213ENST00000453056 SOWAHBA6NEL2 793 aa17.96■□□□□ 0.47
VPS8-213ENST00000453056 SNAI1O95863 264 aaPredicted RBP17.96■□□□□ 0.47
VPS8-213ENST00000453056 RXRAP19793 462 aa17.96■□□□□ 0.47
VPS8-213ENST00000453056 RPS6KB1P23443 525 aa17.96■□□□□ 0.47
VPS8-213ENST00000453056 ACVR2BQ13705 512 aa17.96■□□□□ 0.47
VPS8-213ENST00000453056 RTN1Q16799 776 aa17.96■□□□□ 0.47
VPS8-213ENST00000453056 RAB11FIP4Q86YS3 637 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms