RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 WDR45BQ5MNZ6 344 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 ANKRD34AQ69YU3 496 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 C6orf15Q6UXA7 325 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 EEPD1Q7L9B9 569 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 SRLQ86TD4 932 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 SPATS2Q86XZ4 545 aaKnown RBP5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 Q8N3U1 123 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 CNTD1Q8N815 330 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 PHC3Q8NDX5 983 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 GLIS3Q8NEA6 775 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 ACRBPQ8NEB7 543 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 TRIM63Q969Q1 353 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 UBL7Q96S82 380 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 EIF2AK1Q9BQI3 630 aaKnown RBP5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 NRSN2Q9GZP1 204 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 TLR6Q9Y2C9 796 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 WASHC2AQ641Q2 1341 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 FRMPD2Q68DX3 1309 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 FAM170AA1A519 330 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 A6NCN8 305 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 GABRDO14764 452 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 PLD2O14939 933 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 PMM2O15305 246 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 EIF4EBP3O60516 100 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 SETSIPP0DME0 302 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 CCNFP41002 786 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 GJA9P57773 515 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 ZBED6P86452 979 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 CAMK2GQ13555 558 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 GRM3Q14832 879 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 SEPT2Q15019 361 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 ZNF423Q2M1K9 1284 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 DACT2Q5SW24 774 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 SYDE2Q5VT97 1194 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 MZT2BQ6NZ67 158 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 FDX2Q6P4F2 183 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 FAM178BQ8IXR5 827 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 FAM186BQ8IYM0 893 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 AHI1Q8N157 1196 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 OR8H2Q8N162 312 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 NDUFAF2Q8N183 169 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 PPM1KQ8N3J5 372 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 ZBTB38Q8NAP3 1195 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 ATRIPQ8WXE1 791 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 GOLGA1Q92805 767 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 UTP4Q969X6 686 aaKnown RBP5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 CLIP3Q96DZ5 547 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 FAM46AQ96IP4 442 aaKnown RBP5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 PAWRQ96IZ0 340 aaKnown RBP5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 SERINC2Q96SA4 455 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 TRIM8Q9BZR9 551 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 NCOA5Q9HCD5 579 aaKnown RBP5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 MAN1C1Q9NR34 630 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 SAGE1Q9NXZ1 904 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 ACAD8Q9UKU7 415 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 AFG3L2Q9Y4W6 797 aa5.28□□□□□ -1.56
HMGB3P21-201ENST00000452483 TNKSO95271 1327 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 ABHD14A-ACY1A0A1B0GW23 586 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 DHX15O43143 795 aaKnown RBP5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 BRINP1O60477 761 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 FBXO21O94952 628 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 CCND1P24385 295 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 MAPK9P45984 424 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 PREPP48147 710 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 ZNF165P49910 485 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 LIG3P49916 1009 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 GTF2A2P52657 109 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 TMPRSS15P98073 1019 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 LMNB2Q03252 620 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 ADCY1Q08828 1119 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 GBX1Q14549 363 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 PTPN21Q16825 1174 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 FNDC3BQ53EP0 1204 aaKnown RBP5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 XRRA1Q6P2D8 792 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 C16orf54Q6UWD8 224 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 FAM196AQ6ZSG2 479 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 MYLK4Q86YV6 388 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 LRRC47Q8N1G4 583 aaKnown RBP5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 ARMC10Q8N2F6 343 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 POF1BQ8WVV4 589 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 CCT6BQ92526 530 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 MYRFLQ96LU7 910 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 TBATAQ96M53 351 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 MYD88Q99836 296 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 KMT5AQ9NQR1 393 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 KLHL11Q9NVR0 708 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 PGAP2Q9UHJ9 254 aa5.27□□□□□ -1.57
HMGB3P21-201ENST00000452483 MEGF11A6BM72 1044 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 PABPN1LA6NDY0 278 aaKnown RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 C9IYK1 514 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 J3KRW8 73 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 SART1O43290 800 aaKnown RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 HMMRO75330 724 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 FBXO24O75426 580 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 SNUPNO95149 360 aaKnown RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 DLGAP3O95886 979 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 CYP11A1P05108 521 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms