RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 PNPLA7Q6ZV29 1317 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 CICQ96RK0 1608 aaPredicted RBP8.04□□□□□ -1.12
LINC00458-203ENST00000451744 U2AF1L5P0DN76 240 aaPredicted RBP8.04□□□□□ -1.12
LINC00458-203ENST00000451744 U2AF1Q01081 240 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC00458-203ENST00000451744 PPP2R3AQ06190 1150 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 SLC39A6Q13433 755 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 SLC15A2Q16348 729 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 LINC00116Q8NCU8 138 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 STK35Q8TDR2 534 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 ISL2Q96A47 359 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 CSRNP1Q96S65 589 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 MKNK2Q9HBH9 465 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 SSU72Q9NP77 194 aaKnown RBP8.04□□□□□ -1.12
LINC00458-203ENST00000451744 TMEM39AQ9NV64 488 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 TMOD3Q9NYL9 352 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 ZNF831Q5JPB2 1677 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 UTRNP46939 3433 aa8.04□□□□□ -1.12
LINC00458-203ENST00000451744 MAP3K5Q99683 1374 aa8.03□□□□□ -1.12
LINC00458-203ENST00000451744 TMEM265A0A087WTH1 108 aa8.03□□□□□ -1.12
LINC00458-203ENST00000451744 RNMTO43148 476 aaKnown RBP8.03□□□□□ -1.12
LINC00458-203ENST00000451744 DCTN1Q14203 1278 aa8.03□□□□□ -1.12
LINC00458-203ENST00000451744 C1orf141Q5JVX7 400 aa8.03□□□□□ -1.12
LINC00458-203ENST00000451744 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.03□□□□□ -1.12
LINC00458-203ENST00000451744 TMEM40Q8WWA1 233 aa8.03□□□□□ -1.12
LINC00458-203ENST00000451744 STK32BQ9NY57 414 aa8.03□□□□□ -1.12
LINC00458-203ENST00000451744 PLEKHG2Q9H7P9 1386 aa8.02□□□□□ -1.13
LINC00458-203ENST00000451744 DBX1A6NMT0 343 aa8.02□□□□□ -1.13
LINC00458-203ENST00000451744 KCNQ3O43525 872 aa8.02□□□□□ -1.13
LINC00458-203ENST00000451744 FMR1Q06787 632 aaKnown RBP eCLIP8.02□□□□□ -1.13
LINC00458-203ENST00000451744 PKN1Q16512 942 aa8.02□□□□□ -1.13
LINC00458-203ENST00000451744 AMOTQ4VCS5 1084 aa8.02□□□□□ -1.13
LINC00458-203ENST00000451744 ANGEL2Q5VTE6 544 aaKnown RBP8.02□□□□□ -1.13
LINC00458-203ENST00000451744 PI16Q6UXB8 463 aa8.02□□□□□ -1.13
LINC00458-203ENST00000451744 TMC7Q7Z402 723 aa8.02□□□□□ -1.13
LINC00458-203ENST00000451744 SULF2Q8IWU5 870 aa8.02□□□□□ -1.13
LINC00458-203ENST00000451744 IL17REQ8NFR9 667 aa8.02□□□□□ -1.13
LINC00458-203ENST00000451744 CFAP53Q96M91 514 aa8.02□□□□□ -1.13
LINC00458-203ENST00000451744 THUMPD2Q9BTF0 503 aaKnown RBP8.02□□□□□ -1.13
LINC00458-203ENST00000451744 PRKRIP1Q9H875 184 aaPredicted RBP8.02□□□□□ -1.13
LINC00458-203ENST00000451744 MYBBP1AQ9BQG0 1328 aaKnown RBP8.02□□□□□ -1.13
LINC00458-203ENST00000451744 TREHO43280 583 aa8.01□□□□□ -1.13
LINC00458-203ENST00000451744 P4HBP07237 508 aaKnown RBP8.01□□□□□ -1.13
LINC00458-203ENST00000451744 ZC3H12AQ5D1E8 599 aaKnown RBP8.01□□□□□ -1.13
LINC00458-203ENST00000451744 MCM10Q7L590 875 aa8.01□□□□□ -1.13
LINC00458-203ENST00000451744 COL23A1Q86Y22 540 aaPredicted RBP8.01□□□□□ -1.13
LINC00458-203ENST00000451744 KSR1Q8IVT5 923 aa8.01□□□□□ -1.13
LINC00458-203ENST00000451744 CCDC146Q8IYE0 955 aa8.01□□□□□ -1.13
LINC00458-203ENST00000451744 DMRTB1Q96MA1 342 aa8.01□□□□□ -1.13
LINC00458-203ENST00000451744 PLEKHF1Q96S99 279 aa8.01□□□□□ -1.13
LINC00458-203ENST00000451744 PRDM7Q9NQW5 492 aa8.01□□□□□ -1.13
LINC00458-203ENST00000451744 GOLGB1Q14789 3259 aaKnown RBP8.01□□□□□ -1.13
LINC00458-203ENST00000451744 LAMB4A4D0S4 1761 aa8□□□□□ -1.13
LINC00458-203ENST00000451744 ERVV-2B6SEH9 535 aa8□□□□□ -1.13
LINC00458-203ENST00000451744 TAGLNQ01995 201 aaKnown RBP8□□□□□ -1.13
LINC00458-203ENST00000451744 MRPL58Q14197 206 aaKnown RBP8□□□□□ -1.13
LINC00458-203ENST00000451744 RALBP1Q15311 655 aa8□□□□□ -1.13
LINC00458-203ENST00000451744 LCE4AQ5TA78 99 aa8□□□□□ -1.13
LINC00458-203ENST00000451744 MAP1SQ66K74 1059 aaPredicted RBP8□□□□□ -1.13
LINC00458-203ENST00000451744 SREK1Q8WXA9 508 aaKnown RBP8□□□□□ -1.13
LINC00458-203ENST00000451744 HEXIM2Q96MH2 286 aaKnown RBP8□□□□□ -1.13
LINC00458-203ENST00000451744 SLC52A2Q9HAB3 445 aa8□□□□□ -1.13
LINC00458-203ENST00000451744 RRP7AQ9Y3A4 280 aaKnown RBP8□□□□□ -1.13
LINC00458-203ENST00000451744 CEMIPQ8WUJ3 1361 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 AFDNP55196 1824 aaKnown RBP7.99□□□□□ -1.13
LINC00458-203ENST00000451744 PRAMEF22A3QJZ6 481 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 HSP90AB1P08238 724 aaKnown RBP7.99□□□□□ -1.13
LINC00458-203ENST00000451744 ARNTP27540 789 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 ERVK-24P63145 666 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 TSNAXIP1Q2TAA8 658 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 SLC23A3Q6PIS1 610 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 DNAJC10Q8IXB1 793 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 RNF214Q8ND24 703 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 GPBAR1Q8TDU6 330 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 ALKBH8Q96BT7 664 aaKnown RBP7.99□□□□□ -1.13
LINC00458-203ENST00000451744 BCO2Q9BYV7 579 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 TNKS2Q9H2K2 1166 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 KIAA1551Q9HCM1 1747 aa7.99□□□□□ -1.13
LINC00458-203ENST00000451744 BCORQ6W2J9 1755 aa7.98□□□□□ -1.13
LINC00458-203ENST00000451744 N4BP2Q86UW6 1770 aaPredicted RBP7.98□□□□□ -1.13
LINC00458-203ENST00000451744 GNAT3A8MTJ3 354 aa7.98□□□□□ -1.13
LINC00458-203ENST00000451744 SPOCD1Q6ZMY3 1216 aa7.98□□□□□ -1.13
LINC00458-203ENST00000451744 SMARCC1Q92922 1105 aaPredicted RBP7.98□□□□□ -1.13
LINC00458-203ENST00000451744 KRTAP4-2Q9BYR5 136 aa7.98□□□□□ -1.13
LINC00458-203ENST00000451744 PPP4R2Q9NY27 417 aa7.98□□□□□ -1.13
LINC00458-203ENST00000451744 MIS18AQ9NYP9 233 aa7.98□□□□□ -1.13
LINC00458-203ENST00000451744 TFCP2L1Q9NZI6 479 aa7.98□□□□□ -1.13
LINC00458-203ENST00000451744 NUDCQ9Y266 331 aa7.98□□□□□ -1.13
LINC00458-203ENST00000451744 AKAP2Q9Y2D5 859 aa7.98□□□□□ -1.13
LINC00458-203ENST00000451744 SCN7AQ01118 1682 aa7.98□□□□□ -1.13
LINC00458-203ENST00000451744 PRPF40AO75400 957 aaKnown RBP7.97□□□□□ -1.13
LINC00458-203ENST00000451744 XRCC5P13010 732 aaKnown RBP7.97□□□□□ -1.13
LINC00458-203ENST00000451744 PIP4K2AP48426 406 aaPredicted RBP7.97□□□□□ -1.13
LINC00458-203ENST00000451744 IKZF1Q13422 519 aa7.97□□□□□ -1.13
LINC00458-203ENST00000451744 FAM214BQ7L5A3 538 aa7.97□□□□□ -1.13
LINC00458-203ENST00000451744 FLAD1Q8NFF5 587 aa7.97□□□□□ -1.13
LINC00458-203ENST00000451744 DRC1Q96MC2 740 aa7.97□□□□□ -1.13
LINC00458-203ENST00000451744 SLC38A3Q99624 504 aa7.97□□□□□ -1.13
LINC00458-203ENST00000451744 SNX11Q9Y5W9 270 aa7.97□□□□□ -1.13
LINC00458-203ENST00000451744 CSADQ9Y600 493 aa7.97□□□□□ -1.13
LINC00458-203ENST00000451744 KIF13BQ9NQT8 1826 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms