RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	SRGAP1	Q7Z6B7	1085 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	NEK8	Q86SG6	692 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	CREBRF	Q8IUR6	639 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	LTBP1	Q14766	1721 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	KIF20A	O95235	890 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	PLA2G4A	P47712	749 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	SLF2	Q8IX21	1173 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	DUSP9	Q99956	384 aa	Known RBP	19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	C7orf25	Q9BPX7	421 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	TRIM9	Q9C026	710 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	MYO1A	Q9UBC5	1043 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	PLIN4	Q96Q06	1357 aa		19.01	■□□□□ 0.63
TOM1-210	ENST00000449058	TTC26	A0AVF1	554 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	MFSD14B	Q5SR56	506 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	CC2D1A	Q6P1N0	951 aa	Predicted RBP	19	■□□□□ 0.63
TOM1-210	ENST00000449058	RBM17	Q96I25	401 aa	Known RBP	19	■□□□□ 0.63
TOM1-210	ENST00000449058	TRIM47	Q96LD4	638 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	DNAJC7	Q99615	494 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	LRRC4B	Q9NT99	713 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	SEC63	Q9UGP8	760 aa	Known RBP	19	■□□□□ 0.63
TOM1-210	ENST00000449058	ABL1	P00519	1130 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	SOGA3	Q5TF21	947 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	SLC35F6	Q8N357	371 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	TBC1D22A	Q8WUA7	517 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	PIGS	Q96S52	555 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	PARD6B	Q9BYG5	372 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	RIOX1	Q9H6W3	641 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	LRRC37A	A6NMS7	1700 aa		19	■□□□□ 0.63
TOM1-210	ENST00000449058	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	CTAGE9	A4FU28	777 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	SEC31A	O94979	1220 aa	Known RBP	18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	OR8K1	Q8NGG5	319 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	CHP1	Q99653	195 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	MMTAG2	Q9BU76	263 aa	Known RBP	18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	ST7	Q9NRC1	585 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	CAPN11	Q9UMQ6	739 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	BBOX1	O75936	387 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	GYS1	P13807	737 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	CHMP4BP1	P59074	171 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	ST5	P78524	1137 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	CEP112	Q8N8E3	955 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	TBC1D16	Q8TBP0	767 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	TBCK	Q8TEA7	893 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	MAGEC2	Q9UBF1	373 aa	Predicted RBP	18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	POLL	Q9UGP5	575 aa		18.99	■□□□□ 0.63
TOM1-210	ENST00000449058	USP17L5	A8MUK1	530 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	hCG_1984214	I3L0E3	225 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	SRGN	P10124	158 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	CCNE1	P24864	410 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	DNM2	P50570	870 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	JAKMIP3	Q5VZ66	844 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	REXO1	Q8N1G1	1221 aa	Known RBP	18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	ZNF713	Q8N859	430 aa	Predicted RBP	18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	P2RX5	Q93086	422 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	SLF1	Q9BQI6	1058 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	REXO2	Q9Y3B8	237 aa	Known RBP	18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	EPN1	Q9Y6I3	576 aa	Predicted RBP	18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	NDUFA10	O95299	355 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	TBC1D8	O95759	1140 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	SERPINB2	P05120	415 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	HOXA10	P31260	410 aa	Predicted RBP	18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	PPP1R2	P41236	205 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	FAM193A	P78312	1265 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	KIF4B	Q2VIQ3	1234 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	COBLL1	Q53SF7	1204 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	CCDC47	Q96A33	483 aa	Known RBP	18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	EXOC1	Q9NV70	894 aa		18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	LUC7L2	Q9Y383	392 aa	Known RBP	18.98	■□□□□ 0.63
TOM1-210	ENST00000449058	BICDL2	A1A5D9	508 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	PDHB	P11177	359 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	TEC	P42680	631 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	PDE4D	Q08499	809 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	CSGALNACT2	Q8N6G5	542 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	MTMR9	Q96QG7	549 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	NAPG	Q99747	312 aa	Predicted RBP	18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	UBXN6	Q9BZV1	441 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	VAT1L	Q9HCJ6	419 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	STK4	Q13043	487 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	ANKRD40	Q6AI12	368 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	WDR59	Q6PJI9	974 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	TUBGCP2	Q9BSJ2	902 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	TTYH3	Q9C0H2	523 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	UBA5	Q9GZZ9	404 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	BIN2	Q9UBW5	565 aa	Predicted RBP	18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	DAGLA	Q9Y4D2	1042 aa		18.97	■□□□□ 0.63
TOM1-210	ENST00000449058	TUBB4B	P68371	445 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	ASIC1	P78348	528 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	AMPD3	Q01432	767 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	GABPA	Q06546	454 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	POTED	Q86YR6	584 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	ARFGAP3	Q9NP61	516 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	TMEM260	Q9NX78	707 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	MTMR4	Q9NYA4	1195 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	QSER1	Q2KHR3	1735 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058		B4DLN1	442 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	SASH3	O75995	380 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	MEA1	Q16626	185 aa		18.96	■□□□□ 0.63
TOM1-210	ENST00000449058	IGKV6D-41	A0A0C4DH26	115 aa		18.95	■□□□□ 0.62
TOM1-210	ENST00000449058	CCDC151	A5D8V7	595 aa		18.95	■□□□□ 0.62

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