RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 RIOX2Q8IUF8 465 aa13.7□□□□□ -0.22
RCL1-208ENST00000448872 TRIM22Q8IYM9 498 aa13.7□□□□□ -0.22
RCL1-208ENST00000448872 SPRYD3Q8NCJ5 442 aa13.7□□□□□ -0.22
RCL1-208ENST00000448872 CLEC4DQ8WXI8 215 aa13.7□□□□□ -0.22
RCL1-208ENST00000448872 AMNQ9BXJ7 453 aa13.7□□□□□ -0.22
RCL1-208ENST00000448872 PCDHA1Q9Y5I3 950 aa13.7□□□□□ -0.22
RCL1-208ENST00000448872 GPR25O00155 361 aa13.69□□□□□ -0.22
RCL1-208ENST00000448872 STXBP3O00186 592 aa13.69□□□□□ -0.22
RCL1-208ENST00000448872 NFIBO00712 420 aa13.69□□□□□ -0.22
RCL1-208ENST00000448872 SCG2P13521 617 aa13.69□□□□□ -0.22
RCL1-208ENST00000448872 WDR78Q5VTH9 848 aa13.69□□□□□ -0.22
RCL1-208ENST00000448872 TRERF1Q96PN7 1200 aa13.69□□□□□ -0.22
RCL1-208ENST00000448872 LLPHQ9BRT6 129 aaKnown RBP13.69□□□□□ -0.22
RCL1-208ENST00000448872 RNF146Q9NTX7 359 aa13.69□□□□□ -0.22
RCL1-208ENST00000448872 VPS54Q9P1Q0 977 aa13.69□□□□□ -0.22
RCL1-208ENST00000448872 OPLAHO14841 1288 aa13.68□□□□□ -0.22
RCL1-208ENST00000448872 ADAMTS3O15072 1205 aa13.68□□□□□ -0.22
RCL1-208ENST00000448872 DEXIO95424 95 aa13.68□□□□□ -0.22
RCL1-208ENST00000448872 ZNF296Q8WUU4 475 aaPredicted RBP13.68□□□□□ -0.22
RCL1-208ENST00000448872 TBC1D5Q92609 795 aa13.68□□□□□ -0.22
RCL1-208ENST00000448872 STK36Q9NRP7 1315 aa13.68□□□□□ -0.22
RCL1-208ENST00000448872 FOXN1O15353 648 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 HSPA1AP0DMV8 641 aaKnown RBP13.67□□□□□ -0.22
RCL1-208ENST00000448872 HSPA1BP0DMV9 641 aaKnown RBP13.67□□□□□ -0.22
RCL1-208ENST00000448872 GJB2P29033 226 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 CCNA1P78396 465 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 LACTBP83111 547 aaPredicted RBP13.67□□□□□ -0.22
RCL1-208ENST00000448872 SP3Q02447 781 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 ALG1Q9BT22 464 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 BARHL2Q9NY43 387 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 RLFQ13129 1914 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 ABCB11O95342 1321 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 SLC25A27O95847 323 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 NAPAP54920 295 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 GPR142Q7Z601 462 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 CCAR1Q8IX12 1150 aaKnown RBP13.67□□□□□ -0.22
RCL1-208ENST00000448872 SHCBP1Q8NEM2 672 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 CD99L2Q8TCZ2 262 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 TRIM47Q96LD4 638 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 PURBQ96QR8 312 aaKnown RBP13.67□□□□□ -0.22
RCL1-208ENST00000448872 ACAD9Q9H845 621 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 RBM27Q9P2N5 1060 aaKnown RBP13.67□□□□□ -0.22
RCL1-208ENST00000448872 KCNJ14Q9UNX9 436 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
RCL1-208ENST00000448872 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
RCL1-208ENST00000448872 A0A0G2JMZ2 1700 aa13.66□□□□□ -0.22
RCL1-208ENST00000448872 HOXA13P31271 388 aaPredicted RBP13.66□□□□□ -0.22
RCL1-208ENST00000448872 PSMC4P43686 418 aa13.66□□□□□ -0.22
RCL1-208ENST00000448872 GUCY1B3Q02153 619 aa13.66□□□□□ -0.22
RCL1-208ENST00000448872 TKFCQ3LXA3 575 aa13.66□□□□□ -0.22
RCL1-208ENST00000448872 NSMFQ6X4W1 530 aa13.66□□□□□ -0.22
RCL1-208ENST00000448872 SLC30A10Q6XR72 485 aa13.66□□□□□ -0.22
RCL1-208ENST00000448872 CHST13Q8NET6 341 aa13.66□□□□□ -0.22
RCL1-208ENST00000448872 MROH8Q9H579 483 aa13.66□□□□□ -0.22
RCL1-208ENST00000448872 A1CFQ9NQ94 594 aaKnown RBP13.66□□□□□ -0.22
RCL1-208ENST00000448872 MRPL11Q9Y3B7 192 aaKnown RBP13.66□□□□□ -0.22
RCL1-208ENST00000448872 FKTNO75072 461 aa13.65□□□□□ -0.22
RCL1-208ENST00000448872 PGK2P07205 417 aa13.65□□□□□ -0.22
RCL1-208ENST00000448872 HSPA8P11142 646 aaKnown RBP13.65□□□□□ -0.22
RCL1-208ENST00000448872 MAPK4P31152 587 aa13.65□□□□□ -0.22
RCL1-208ENST00000448872 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.22
RCL1-208ENST00000448872 HMGN5P82970 282 aaKnown RBP13.65□□□□□ -0.22
RCL1-208ENST00000448872 BAATQ14032 418 aaPredicted RBP13.65□□□□□ -0.22
RCL1-208ENST00000448872 BECN1Q14457 450 aa13.65□□□□□ -0.22
RCL1-208ENST00000448872 UBE2SQ16763 222 aa13.65□□□□□ -0.22
RCL1-208ENST00000448872 PLEKHH3Q7Z736 793 aa13.65□□□□□ -0.22
RCL1-208ENST00000448872 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.22
RCL1-208ENST00000448872 INTS4Q96HW7 963 aaKnown RBP13.65□□□□□ -0.22
RCL1-208ENST00000448872 MMP19Q99542 508 aa13.65□□□□□ -0.22
RCL1-208ENST00000448872 CWC22Q9HCG8 908 aaKnown RBP13.65□□□□□ -0.22
RCL1-208ENST00000448872 SMCO2A6NFE2 343 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 TNPO2O14787 897 aaKnown RBP13.64□□□□□ -0.23
RCL1-208ENST00000448872 CFBP00751 764 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 HSP90AA1P07900 732 aaKnown RBP13.64□□□□□ -0.23
RCL1-208ENST00000448872 PTPREP23469 700 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 FCGRTP55899 365 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 NPY5RQ15761 445 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 USP17L6PQ6QN14 398 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 ANKRD35Q8N283 1001 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 WASF1Q92558 559 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 PSTPIP2Q9H939 334 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 TMEM260Q9NX78 707 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 CYP39A1Q9NYL5 469 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 COL20A1Q9P218 1284 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 PNMA2Q9UL42 364 aa13.64□□□□□ -0.23
RCL1-208ENST00000448872 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
RCL1-208ENST00000448872 hCG_1984214I3L0E3 225 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 MEIS2O14770 477 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 COBLO75128 1261 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 FCER1AP12319 257 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 CALML3P27482 149 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 ADORA2AP29274 412 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 COPB2P35606 906 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 LBX1P52954 281 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 NLRP5P59047 1200 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 RPS6P62753 249 aaKnown RBP13.63□□□□□ -0.23
RCL1-208ENST00000448872 KCTD2Q14681 263 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 NOM1Q5C9Z4 860 aaKnown RBP13.63□□□□□ -0.23
RCL1-208ENST00000448872 MORN1Q5T089 497 aa13.63□□□□□ -0.23
RCL1-208ENST00000448872 KRT40Q6A162 431 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms