RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.37■□□□□ 0.532e-9■■■□□ 15
TRA2A-203ENST00000448549 HELLSQ9NRZ9 838 aa18.37■□□□□ 0.53
TRA2A-203ENST00000448549 CYP39A1Q9NYL5 469 aa18.37■□□□□ 0.53
TRA2A-203ENST00000448549 CCPG1Q9ULG6 757 aa18.37■□□□□ 0.53
TRA2A-203ENST00000448549 GNEQ9Y223 722 aaKnown RBP18.37■□□□□ 0.53
TRA2A-203ENST00000448549 ASTN1O14525 1302 aa18.37■□□□□ 0.53
TRA2A-203ENST00000448549 ORC4O43929 436 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 FGRP09769 529 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 CSF2RAP15509 400 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 SMPD1P17405 629 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 NOVP48745 357 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 PDE1AP54750 535 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 ALX1Q15699 326 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 TTBK2Q6IQ55 1244 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 NSMFQ6X4W1 530 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 EEPD1Q7L9B9 569 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 FAM227BQ96M60 508 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 PURBQ96QR8 312 aaKnown RBP18.36■□□□□ 0.53
TRA2A-203ENST00000448549 CRBNQ96SW2 442 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 PPP1R12CQ9BZL4 782 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 PDGFCQ9NRA1 345 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 TOMM22Q9NS69 142 aa18.36■□□□□ 0.53
TRA2A-203ENST00000448549 TMEM265A0A087WTH1 108 aa18.35■□□□□ 0.53
TRA2A-203ENST00000448549 TLR3O15455 904 aaKnown RBP18.35■□□□□ 0.53
TRA2A-203ENST00000448549 DYNC1LI2O43237 492 aaPredicted RBP18.35■□□□□ 0.53
TRA2A-203ENST00000448549 FGAP02671 866 aa18.35■□□□□ 0.53
TRA2A-203ENST00000448549 ICAM1P05362 532 aa18.35■□□□□ 0.53
TRA2A-203ENST00000448549 FOSL2P15408 326 aa18.35■□□□□ 0.53
TRA2A-203ENST00000448549 DNAJB2P25686 324 aa18.35■□□□□ 0.53
TRA2A-203ENST00000448549 SLC16A2P36021 539 aa18.35■□□□□ 0.53
TRA2A-203ENST00000448549 PPIGQ13427 754 aaKnown RBP eCLIP18.35■□□□□ 0.536e-17■■■■□ 24.6
TRA2A-203ENST00000448549 FSCN1Q16658 493 aaKnown RBP18.35■□□□□ 0.53
TRA2A-203ENST00000448549 RRP12Q5JTH9 1297 aaKnown RBP18.35■□□□□ 0.53
TRA2A-203ENST00000448549 TMEM63BQ5T3F8 832 aa18.35■□□□□ 0.53
TRA2A-203ENST00000448549 TLK2Q86UE8 772 aa18.35■□□□□ 0.53
TRA2A-203ENST00000448549 FBXO16Q8IX29 292 aaPredicted RBP18.35■□□□□ 0.53
TRA2A-203ENST00000448549 DCAF4Q8WV16 495 aa18.35■□□□□ 0.53
TRA2A-203ENST00000448549 AP5M1Q9H0R1 490 aa18.35■□□□□ 0.53
TRA2A-203ENST00000448549 MYH4Q9Y623 1939 aa18.34■□□□□ 0.53
TRA2A-203ENST00000448549 A0A0D9SFI3 127 aa18.34■□□□□ 0.53
TRA2A-203ENST00000448549 CD4P01730 458 aa18.34■□□□□ 0.53
TRA2A-203ENST00000448549 ACRP10323 421 aa18.34■□□□□ 0.53
TRA2A-203ENST00000448549 GRIN2CQ14957 1233 aa18.34■□□□□ 0.53
TRA2A-203ENST00000448549 TMEM240Q5SV17 173 aa18.34■□□□□ 0.53
TRA2A-203ENST00000448549 IQSEC1Q6DN90 963 aa18.34■□□□□ 0.53
TRA2A-203ENST00000448549 TAPT1Q6NXT6 567 aa18.34■□□□□ 0.53
TRA2A-203ENST00000448549 TMEM199Q8N511 208 aa18.34■□□□□ 0.53
TRA2A-203ENST00000448549 TMEM47Q9BQJ4 181 aa18.34■□□□□ 0.53
TRA2A-203ENST00000448549 RANBP17Q9H2T7 1088 aaKnown RBP18.34■□□□□ 0.53
TRA2A-203ENST00000448549 CABYRO75952 493 aa18.33■□□□□ 0.52
TRA2A-203ENST00000448549 TOP1P11387 765 aaKnown RBP18.33■□□□□ 0.52
TRA2A-203ENST00000448549 CYP2C18P33260 490 aa18.33■□□□□ 0.52
TRA2A-203ENST00000448549 MCMDC2Q4G0Z9 681 aa18.33■□□□□ 0.52
TRA2A-203ENST00000448549 BTNL9Q6UXG8 535 aa18.33■□□□□ 0.52
TRA2A-203ENST00000448549 ZNF365Q70YC5 407 aa18.33■□□□□ 0.52
TRA2A-203ENST00000448549 SLC43A3Q8NBI5 491 aa18.33■□□□□ 0.52
TRA2A-203ENST00000448549 GPCPD1Q9NPB8 672 aa18.33■□□□□ 0.52
TRA2A-203ENST00000448549 UNC80Q8N2C7 3258 aa18.33■□□□□ 0.52
TRA2A-203ENST00000448549 GRIN2DO15399 1336 aa18.32■□□□□ 0.52
TRA2A-203ENST00000448549 FRMPD2Q68DX3 1309 aaPredicted RBP18.32■□□□□ 0.52
TRA2A-203ENST00000448549 GRXCR1A8MXD5 290 aa18.32■□□□□ 0.52
TRA2A-203ENST00000448549 HSPD1P10809 573 aaKnown RBP18.32■□□□□ 0.52
TRA2A-203ENST00000448549 HDAC1Q13547 482 aaPredicted RBP18.32■□□□□ 0.52
TRA2A-203ENST00000448549 ITGA7Q13683 1181 aa18.32■□□□□ 0.52
TRA2A-203ENST00000448549 BAATQ14032 418 aaPredicted RBP18.32■□□□□ 0.52
TRA2A-203ENST00000448549 SYDE2Q5VT97 1194 aa18.32■□□□□ 0.52
TRA2A-203ENST00000448549 KIAA1211Q6ZU35 1233 aa18.32■□□□□ 0.52
TRA2A-203ENST00000448549 TIFAQ96CG3 184 aa18.32■□□□□ 0.52
TRA2A-203ENST00000448549 ZNF576Q9H609 170 aa18.32■□□□□ 0.52
TRA2A-203ENST00000448549 NFIBO00712 420 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 ZEB2O60315 1214 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 PBX2P40425 430 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 HAND2P61296 217 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 PSMC6P62333 389 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 NMIQ13287 307 aaPredicted RBP18.31■□□□□ 0.52
TRA2A-203ENST00000448549 RASIP1Q5U651 963 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 ZNF589Q86UQ0 364 aaPredicted RBP18.31■□□□□ 0.52
TRA2A-203ENST00000448549 MORC4Q8TE76 937 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 VTA1Q9NP79 307 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 TCP11L1Q9NUJ3 509 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 Q9Y3F1 56 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 CUL9Q8IWT3 2517 aa18.31■□□□□ 0.52
TRA2A-203ENST00000448549 PSRC1Q6PGN9 363 aaPredicted RBP18.3■□□□□ 0.52
TRA2A-203ENST00000448549 PBX4Q9BYU1 374 aa18.3■□□□□ 0.52
TRA2A-203ENST00000448549 TRPV6Q9H1D0 765 aa18.3■□□□□ 0.52
TRA2A-203ENST00000448549 HIPK3Q9H422 1215 aa18.3■□□□□ 0.52
TRA2A-203ENST00000448549 IL23AQ9NPF7 189 aa18.3■□□□□ 0.52
TRA2A-203ENST00000448549 ADD3Q9UEY8 706 aaKnown RBP18.3■□□□□ 0.52
TRA2A-203ENST00000448549 UMODL1Q5DID0 1318 aa18.29■□□□□ 0.52
TRA2A-203ENST00000448549 PTPDC1A2A3K4 754 aa18.29■□□□□ 0.52
TRA2A-203ENST00000448549 TRIM6-TRIM34B2RNG4 842 aa18.29■□□□□ 0.52
TRA2A-203ENST00000448549 PDHBP11177 359 aa18.29■□□□□ 0.52
TRA2A-203ENST00000448549 ALDH5A1P51649 535 aaPredicted RBP18.29■□□□□ 0.52
TRA2A-203ENST00000448549 LNPKQ9C0E8 428 aa18.29■□□□□ 0.52
TRA2A-203ENST00000448549 CDH23Q9H251 3354 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 B4GALT4O60513 344 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 CALML3P27482 149 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 CCL23P55773 120 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 DUSP28Q4G0W2 176 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 AKNAD1Q5T1N1 836 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms