RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 VPS53Q5VIR6 699 aa16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 CCDC174Q6PII3 467 aa16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 FGD4Q96M96 766 aa16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 TRERF1Q96PN7 1200 aa16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 HOMER2Q9NSB8 354 aa16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 ANAPC4Q9UJX5 808 aa16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 STX8Q9UNK0 236 aa16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 CCDC171Q6TFL3 1326 aa16.18■□□□□ 0.18
PDLIM2-213ENST00000448520 A0A0U1RQG5 324 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 ARVCFO00192 962 aa16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 FOXP2O15409 715 aa16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 CNTN2Q02246 1040 aa16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 TNFAIP2Q03169 654 aa16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 ALX1Q15699 326 aa16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 MFSD5Q6N075 450 aa16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 RUFY2Q8WXA3 655 aa16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 AGBL1Q96MI9 1066 aa16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 A1CFQ9NQ94 594 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 RNF146Q9NTX7 359 aa16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 ZNF536O15090 1300 aa16.17■□□□□ 0.18
PDLIM2-213ENST00000448520 MYADML2A6NDP7 307 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 TLR3O15455 904 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 CABYRO75952 493 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 FGRP09769 529 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 NOVP48745 357 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 EPHB4P54760 987 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 PTH1RQ03431 593 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 PPIGQ13427 754 aaKnown RBP eCLIP16.16■□□□□ 0.181e-8■■■□□ 18.4
PDLIM2-213ENST00000448520 IQSEC1Q6DN90 963 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 SEZ6LQ9BYH1 1024 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 KATNBL1Q9H079 304 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 IL17RBQ9NRM6 502 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 TBX21Q9UL17 535 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 RAD50Q92878 1312 aa16.16■□□□□ 0.18
PDLIM2-213ENST00000448520 ADCY6O43306 1168 aa16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 ORC4O43929 436 aa16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 ZEB2O60315 1214 aa16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 RANBP6O60518 1105 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 ALAS1P13196 640 aa16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 CTDSPL2Q05D32 466 aa16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 KCTD1Q719H9 257 aa16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 NOL8Q76FK4 1167 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 TMEM199Q8N511 208 aa16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 TTYH1Q9H313 450 aaPredicted RBP16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 PRR12Q9ULL5 1215 aa16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 Q9Y3F1 56 aa16.15■□□□□ 0.18
PDLIM2-213ENST00000448520 SOWAHBA6NEL2 793 aa16.14■□□□□ 0.17
PDLIM2-213ENST00000448520 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-213ENST00000448520 DCAF4Q8WV16 495 aa16.14■□□□□ 0.17
PDLIM2-213ENST00000448520 AP5M1Q9H0R1 490 aa16.14■□□□□ 0.17
PDLIM2-213ENST00000448520 ANO2Q9NQ90 1003 aa16.14■□□□□ 0.17
PDLIM2-213ENST00000448520 INCENPQ9NQS7 918 aa16.14■□□□□ 0.17
PDLIM2-213ENST00000448520 GNEQ9Y223 722 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-213ENST00000448520 LOC102724159A0A0B4J2E5 919 aa16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 CTAGE5O15320 804 aa16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 PWP2Q15269 919 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 BTNL9Q6UXG8 535 aa16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 FAM126BQ8IXS8 530 aa16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 MAFAQ8NHW3 353 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 LSG1Q9H089 658 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 TCP11L1Q9NUJ3 509 aa16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 CYP39A1Q9NYL5 469 aa16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 PNMA2Q9UL42 364 aa16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 CCPG1Q9ULG6 757 aa16.13■□□□□ 0.17
PDLIM2-213ENST00000448520 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 DYNC1LI2O43237 492 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 NMT2O60551 498 aa16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 CD4P01730 458 aa16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 FGAP02671 866 aa16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 ICAM1P05362 532 aa16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 HSPD1P10809 573 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 TLK2Q86UE8 772 aa16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 SLC43A3Q8NBI5 491 aa16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 MYLIPQ8WY64 445 aa16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 CHMP4CQ96CF2 233 aa16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.12■□□□□ 0.171e-6■■■■□ 19.3
PDLIM2-213ENST00000448520 COL25A1Q9BXS0 654 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 ADD3Q9UEY8 706 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-213ENST00000448520 UNC80Q8N2C7 3258 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 PCP11498 1178 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 FOSL2P15408 326 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 DNAJB2P25686 324 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 BEX3Q00994 111 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 FSCN1Q16658 493 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 CCDC96Q2M329 555 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 MUM1L1Q5H9M0 696 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 TMEM240Q5SV17 173 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 TAPT1Q6NXT6 567 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 MORC4Q8TE76 937 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 TTC14Q96N46 770 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 BACH2Q9BYV9 841 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 RANBP17Q9H2T7 1088 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 VTA1Q9NP79 307 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 TOMM22Q9NS69 142 aa16.11■□□□□ 0.17
PDLIM2-213ENST00000448520 CSF2RAP15509 400 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms