RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 MYH6P13533 1939 aa29.12■■■□□ 2.25
UFD1-204ENST00000447868 SEPT4O43236 478 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 MSCO60682 206 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 REC8O95072 547 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 QRICH1Q2TAL8 776 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 ADCK5Q3MIX3 580 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 MAMDC4Q6UXC1 1216 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 ZNF654Q8IZM8 581 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 CLEC4DQ8WXI8 215 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 MYL10Q9BUA6 226 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 SYNGAP1Q96PV0 1343 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 PDE4DIPQ5VU43 2346 aa29.11■■■□□ 2.25
UFD1-204ENST00000447868 MCM3APO60318 1980 aa29.1■■■□□ 2.25
UFD1-204ENST00000447868 PTPDC1A2A3K4 754 aa29.1■■■□□ 2.25
UFD1-204ENST00000447868 SOWAHBA6NEL2 793 aa29.1■■■□□ 2.25
UFD1-204ENST00000447868 CCDC69A6NI79 296 aa29.1■■■□□ 2.25
UFD1-204ENST00000447868 SNAI1O95863 264 aaPredicted RBP29.1■■■□□ 2.25
UFD1-204ENST00000447868 TSGA10IPQ3SY00 556 aa29.1■■■□□ 2.25
UFD1-204ENST00000447868 NRBP1Q9UHY1 535 aa29.1■■■□□ 2.25
UFD1-204ENST00000447868 MNX1P50219 401 aaPredicted RBP29.09■■■□□ 2.25
UFD1-204ENST00000447868 BAATQ14032 418 aaPredicted RBP29.09■■■□□ 2.25
UFD1-204ENST00000447868 KRT32Q14532 448 aa29.09■■■□□ 2.25
UFD1-204ENST00000447868 TMTC2Q8N394 836 aa29.09■■■□□ 2.25
UFD1-204ENST00000447868 PURBQ96QR8 312 aaKnown RBP29.09■■■□□ 2.25
UFD1-204ENST00000447868 DDAH1O94760 285 aa29.08■■■□□ 2.25
UFD1-204ENST00000447868 ZNF865P0CJ78 1059 aaPredicted RBP29.08■■■□□ 2.25
UFD1-204ENST00000447868 HSPA4P34932 840 aa29.08■■■□□ 2.25
UFD1-204ENST00000447868 ARMCX2Q7L311 632 aa29.08■■■□□ 2.25
UFD1-204ENST00000447868 NECAB2Q7Z6G3 386 aa29.08■■■□□ 2.25
UFD1-204ENST00000447868 FBXO11Q86XK2 927 aa29.08■■■□□ 2.25
UFD1-204ENST00000447868 CCDC144CPQ8IYA2 1237 aa29.08■■■□□ 2.25
UFD1-204ENST00000447868 TCEANC2Q96MN5 208 aa29.08■■■□□ 2.25
UFD1-204ENST00000447868 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.08■■■□□ 2.25
UFD1-204ENST00000447868 ZHX1Q9UKY1 873 aaPredicted RBP29.08■■■□□ 2.25
UFD1-204ENST00000447868 LCTP09848 1927 aa29.08■■■□□ 2.25
UFD1-204ENST00000447868 CALML3P27482 149 aa29.07■■■□□ 2.24
UFD1-204ENST00000447868 SLC30A10Q6XR72 485 aa29.07■■■□□ 2.24
UFD1-204ENST00000447868 RNF207Q6ZRF8 634 aa29.07■■■□□ 2.24
UFD1-204ENST00000447868 ABCB11O95342 1321 aa29.06■■■□□ 2.24
UFD1-204ENST00000447868 LIFRP42702 1097 aa29.06■■■□□ 2.24
UFD1-204ENST00000447868 SLC35G1Q2M3R5 365 aa29.06■■■□□ 2.24
UFD1-204ENST00000447868 DHX32Q7L7V1 743 aaKnown RBP29.06■■■□□ 2.24
UFD1-204ENST00000447868 HOMER1Q86YM7 354 aa29.06■■■□□ 2.24
UFD1-204ENST00000447868 RAB11FIP4Q86YS3 637 aa29.06■■■□□ 2.24
UFD1-204ENST00000447868 CTCFLQ8NI51 663 aaPredicted RBP29.06■■■□□ 2.24
UFD1-204ENST00000447868 DPF3Q92784 378 aa29.06■■■□□ 2.24
UFD1-204ENST00000447868 HTATIP2Q9BUP3 242 aa29.06■■■□□ 2.24
UFD1-204ENST00000447868 SNX14Q9Y5W7 946 aa29.06■■■□□ 2.24
UFD1-204ENST00000447868 DDX49Q9Y6V7 483 aaKnown RBP29.06■■■□□ 2.24
UFD1-204ENST00000447868 ASTN1O14525 1302 aa29.05■■■□□ 2.24
UFD1-204ENST00000447868 MYCNP04198 464 aaPredicted RBP29.05■■■□□ 2.24
UFD1-204ENST00000447868 RXRAP19793 462 aa29.05■■■□□ 2.24
UFD1-204ENST00000447868 KCNB2Q92953 911 aa29.05■■■□□ 2.24
UFD1-204ENST00000447868 C11orf49Q9H6J7 331 aa29.05■■■□□ 2.24
UFD1-204ENST00000447868 SLC12A7Q9Y666 1083 aa29.05■■■□□ 2.24
UFD1-204ENST00000447868 BAZ2BQ9UIF8 2168 aaKnown RBP29.05■■■□□ 2.24
UFD1-204ENST00000447868 ASB14A6NK59 587 aa29.04■■■□□ 2.24
UFD1-204ENST00000447868 ZBTB5O15062 677 aa29.04■■■□□ 2.24
UFD1-204ENST00000447868 EXOSC10Q01780 885 aaKnown RBP29.04■■■□□ 2.24
UFD1-204ENST00000447868 ACVR2BQ13705 512 aa29.04■■■□□ 2.24
UFD1-204ENST00000447868 PIBF1Q8WXW3 757 aa29.04■■■□□ 2.24
UFD1-204ENST00000447868 MTMR8Q96EF0 704 aa29.04■■■□□ 2.24
UFD1-204ENST00000447868 PIGSQ96S52 555 aa29.04■■■□□ 2.24
UFD1-204ENST00000447868 AMNQ9BXJ7 453 aa29.04■■■□□ 2.24
UFD1-204ENST00000447868 RIOX1Q9H6W3 641 aa29.04■■■□□ 2.24
UFD1-204ENST00000447868 CYTH3O43739 400 aa29.03■■■□□ 2.24
UFD1-204ENST00000447868 RARBP10826 455 aa29.03■■■□□ 2.24
UFD1-204ENST00000447868 AKR1A1P14550 325 aa29.03■■■□□ 2.24
UFD1-204ENST00000447868 KIF5BP33176 963 aa29.03■■■□□ 2.24
UFD1-204ENST00000447868 RPS6P62753 249 aaKnown RBP29.03■■■□□ 2.24
UFD1-204ENST00000447868 LENG1Q96BZ8 264 aaPredicted RBP29.03■■■□□ 2.24
UFD1-204ENST00000447868 JAKMIP1Q96N16 626 aaKnown RBP29.03■■■□□ 2.24
UFD1-204ENST00000447868 MAP3K14Q99558 947 aa29.03■■■□□ 2.24
UFD1-204ENST00000447868 ABHD16BQ9H3Z7 469 aa29.03■■■□□ 2.24
UFD1-204ENST00000447868 PPP1R11O60927 126 aaPredicted RBP29.02■■■□□ 2.24
UFD1-204ENST00000447868 HMGB1P09429 215 aaKnown RBP29.02■■■□□ 2.24
UFD1-204ENST00000447868 CPA1P15085 419 aa29.02■■■□□ 2.24
UFD1-204ENST00000447868 GJC2Q5T442 439 aaPredicted RBP29.02■■■□□ 2.24
UFD1-204ENST00000447868 ADD3Q9UEY8 706 aaKnown RBP29.02■■■□□ 2.24
UFD1-204ENST00000447868 FAM184BQ9ULE4 1060 aa29.02■■■□□ 2.24
UFD1-204ENST00000447868 MRPL11Q9Y3B7 192 aaKnown RBP29.02■■■□□ 2.24
UFD1-204ENST00000447868 CALM1P0DP23 149 aa29.01■■■□□ 2.23
UFD1-204ENST00000447868 CALM2P0DP24 149 aa29.01■■■□□ 2.23
UFD1-204ENST00000447868 CALM3P0DP25 149 aa29.01■■■□□ 2.23
UFD1-204ENST00000447868 ARRDC4Q8NCT1 418 aa29.01■■■□□ 2.23
UFD1-204ENST00000447868 TBC1D5Q92609 795 aa29.01■■■□□ 2.23
UFD1-204ENST00000447868 XPNPEP3Q9NQH7 507 aa29.01■■■□□ 2.23
UFD1-204ENST00000447868 ALDH5A1P51649 535 aaPredicted RBP29■■■□□ 2.23
UFD1-204ENST00000447868 CCDC144BQ3MJ40 725 aa29■■■□□ 2.23
UFD1-204ENST00000447868 SYNE3Q6ZMZ3 975 aa29■■■□□ 2.23
UFD1-204ENST00000447868 SGMS1Q86VZ5 419 aa29■■■□□ 2.23
UFD1-204ENST00000447868 MICU3Q86XE3 530 aa29■■■□□ 2.23
UFD1-204ENST00000447868 RGS22Q8NE09 1264 aa29■■■□□ 2.23
UFD1-204ENST00000447868 KATNBL1Q9H079 304 aa29■■■□□ 2.23
UFD1-204ENST00000447868 PCDHA1Q9Y5I3 950 aa29■■■□□ 2.23
UFD1-204ENST00000447868 DNM1LO00429 736 aa28.99■■■□□ 2.23
UFD1-204ENST00000447868 PLEKHA8P1O95397 391 aa28.99■■■□□ 2.23
UFD1-204ENST00000447868 FGD1P98174 961 aa28.99■■■□□ 2.23
UFD1-204ENST00000447868 EEPD1Q7L9B9 569 aa28.99■■■□□ 2.23
UFD1-204ENST00000447868 MCF2L2Q86YR7 1114 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms