RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 CDC37Q16543 378 aaPredicted RBP13.41□□□□□ -0.26
LINC00408-201ENST00000447784 CMTR1Q8N1G2 835 aaKnown RBP13.41□□□□□ -0.26
LINC00408-201ENST00000447784 SRBD1Q8N5C6 995 aaKnown RBP13.41□□□□□ -0.26
LINC00408-201ENST00000447784 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
LINC00408-201ENST00000447784 SPATC1LQ9H0A9 340 aa13.41□□□□□ -0.26
LINC00408-201ENST00000447784 RNF208Q9H0X6 261 aa13.41□□□□□ -0.26
LINC00408-201ENST00000447784 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
LINC00408-201ENST00000447784 JMJD4Q9H9V9 463 aa13.41□□□□□ -0.26
LINC00408-201ENST00000447784 SLC38A10Q9HBR0 1119 aa13.41□□□□□ -0.26
LINC00408-201ENST00000447784 RAVER2Q9HCJ3 691 aaKnown RBP13.41□□□□□ -0.26
LINC00408-201ENST00000447784 RBM27Q9P2N5 1060 aaKnown RBP13.41□□□□□ -0.26
LINC00408-201ENST00000447784 V9GY48 417 aaPredicted RBP13.41□□□□□ -0.26
LINC00408-201ENST00000447784 SLC15A5A6NIM6 579 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 ZBTB5O15062 677 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 STRNO43815 780 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 MYCP01106 439 aaPredicted RBP13.4□□□□□ -0.26
LINC00408-201ENST00000447784 COPB2P35606 906 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 STAT3P40763 770 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 RGS2P41220 211 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 SSRP1Q08945 709 aaKnown RBP13.4□□□□□ -0.26
LINC00408-201ENST00000447784 MAP2K5Q13163 448 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 GTF3C6Q969F1 213 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 PIGSQ96S52 555 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 AMNQ9BXJ7 453 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 MOV10L1Q9BXT6 1211 aaKnown RBP13.4□□□□□ -0.26
LINC00408-201ENST00000447784 TEX13BQ9BXU2 312 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 RANBP17Q9H2T7 1088 aaKnown RBP13.4□□□□□ -0.26
LINC00408-201ENST00000447784 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
LINC00408-201ENST00000447784 CCPG1Q9ULG6 757 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 IVNS1ABPQ9Y6Y0 642 aa13.4□□□□□ -0.26
LINC00408-201ENST00000447784 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 SLC25A27O95847 323 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 ICAM1P05362 532 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 HOXC6P09630 235 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 IFNAR1P17181 557 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 CYP2B6P20813 491 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 GRB14Q14449 540 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 TMEM132BQ14DG7 1078 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 QRICH1Q2TAL8 776 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 WDR78Q5VTH9 848 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 SNRNP48Q6IEG0 339 aaKnown RBP13.39□□□□□ -0.27
LINC00408-201ENST00000447784 FBXO11Q86XK2 927 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 ABRAQ8N0Z2 381 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 TRIB2Q92519 343 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 SNX21Q969T3 373 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 TMX3Q96JJ7 454 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 APBA2Q99767 749 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 SLC26A6Q9BXS9 759 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 UNC93B1Q9H1C4 597 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 MROH8Q9H579 483 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 PAK6Q9NQU5 681 aaPredicted RBP13.39□□□□□ -0.27
LINC00408-201ENST00000447784 NID2Q14112 1375 aa13.39□□□□□ -0.27
LINC00408-201ENST00000447784 K7ELQ4 463 aaPredicted RBP13.38□□□□□ -0.27
LINC00408-201ENST00000447784 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 CYTH3O43739 400 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 LARGE1O95461 756 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 SGPL1O95470 568 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 HSP90AA1P07900 732 aaKnown RBP13.38□□□□□ -0.27
LINC00408-201ENST00000447784 ALAS1P13196 640 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 ERCC3P19447 782 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 BECN1Q14457 450 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 TKFCQ3LXA3 575 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 MAP3K21Q5TCX8 1036 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 NCAPG2Q86XI2 1143 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 U2AF1L4Q8WU68 220 aaKnown RBP13.38□□□□□ -0.27
LINC00408-201ENST00000447784 WASF1Q92558 559 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 PHKBQ93100 1093 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 LLPHQ9BRT6 129 aaKnown RBP13.38□□□□□ -0.27
LINC00408-201ENST00000447784 RNF26Q9BY78 433 aaPredicted RBP13.38□□□□□ -0.27
LINC00408-201ENST00000447784 FBXO40Q9UH90 709 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 GREB1LQ9C091 1923 aaPredicted RBP13.38□□□□□ -0.27
LINC00408-201ENST00000447784 CENPFP49454 3210 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 RPTORQ8N122 1335 aa13.38□□□□□ -0.27
LINC00408-201ENST00000447784 hCG_1642624A0A1W2PR95 340 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 PRPF3O43395 683 aaKnown RBP13.37□□□□□ -0.27
LINC00408-201ENST00000447784 CD2BP2O95400 341 aaKnown RBP13.37□□□□□ -0.27
LINC00408-201ENST00000447784 USH1GQ495M9 461 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 HEATR3Q7Z4Q2 680 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 RIOX2Q8IUF8 465 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 REPS2Q8NFH8 660 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 SHISA4Q96DD7 197 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 MTMR8Q96EF0 704 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 AGBL1Q96MI9 1066 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC00408-201ENST00000447784 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
LINC00408-201ENST00000447784 HOMER2Q9NSB8 354 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 ZNF214Q9UL59 606 aaPredicted RBP13.37□□□□□ -0.27
LINC00408-201ENST00000447784 MRPL11Q9Y3B7 192 aaKnown RBP13.37□□□□□ -0.27
LINC00408-201ENST00000447784 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.37□□□□□ -0.27
LINC00408-201ENST00000447784 PCDHA1Q9Y5I3 950 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 ABCB11O95342 1321 aa13.37□□□□□ -0.27
LINC00408-201ENST00000447784 MGAMO43451 1857 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 PPFIA3O75145 1194 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 DEXIO95424 95 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 XBP1P17861 261 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 FUT2Q10981 343 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 NTRK3Q16288 839 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 SLC35G1Q2M3R5 365 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 MCF2L2Q86YR7 1114 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms