RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 BARHL2Q9NY43 387 aa20.75■□□□□ 0.91
TRAPPC4-203ENST00000447216 CEP350Q5VT06 3117 aa20.75■□□□□ 0.91
TRAPPC4-203ENST00000447216 ECM2O94769 699 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC4-203ENST00000447216 NAPAP54920 295 aa20.74■□□□□ 0.91
TRAPPC4-203ENST00000447216 FAM110CQ1W6H9 321 aa20.74■□□□□ 0.91
TRAPPC4-203ENST00000447216 MUM1L1Q5H9M0 696 aa20.74■□□□□ 0.91
TRAPPC4-203ENST00000447216 RIOX2Q8IUF8 465 aa20.74■□□□□ 0.91
TRAPPC4-203ENST00000447216 WASF1Q92558 559 aa20.74■□□□□ 0.91
TRAPPC4-203ENST00000447216 RNF146Q9NTX7 359 aa20.74■□□□□ 0.91
TRAPPC4-203ENST00000447216 ABCB11O95342 1321 aa20.74■□□□□ 0.91
TRAPPC4-203ENST00000447216 GUCY1B3Q02153 619 aa20.73■□□□□ 0.91
TRAPPC4-203ENST00000447216 NCAPG2Q86XI2 1143 aa20.73■□□□□ 0.91
TRAPPC4-203ENST00000447216 TRERF1Q96PN7 1200 aa20.73■□□□□ 0.91
TRAPPC4-203ENST00000447216 PORCNQ9H237 461 aa20.73■□□□□ 0.91
TRAPPC4-203ENST00000447216 KCNJ14Q9UNX9 436 aa20.73■□□□□ 0.91
TRAPPC4-203ENST00000447216 LCTP09848 1927 aa20.72■□□□□ 0.91
TRAPPC4-203ENST00000447216 ERCC3P19447 782 aa20.72■□□□□ 0.91
TRAPPC4-203ENST00000447216 MAP2K1Q02750 393 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC4-203ENST00000447216 CLEC4DQ8WXI8 215 aa20.72■□□□□ 0.91
TRAPPC4-203ENST00000447216 EFCC1Q9HA90 598 aa20.72■□□□□ 0.91
TRAPPC4-203ENST00000447216 DAXXQ9UER7 740 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC4-203ENST00000447216 MRPL11Q9Y3B7 192 aaKnown RBP20.72■□□□□ 0.91
TRAPPC4-203ENST00000447216 hCG_1984214I3L0E3 225 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 NFIBO00712 420 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 OPLAHO14841 1288 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 ADAMTS3O15072 1205 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 TKFCQ3LXA3 575 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 WDR78Q5VTH9 848 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 ZNF713Q8N859 430 aaPredicted RBP20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 TBC1D5Q92609 795 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 C8orf76Q96K31 380 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 TSKSQ9UJT2 592 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 PNMA2Q9UL42 364 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 PCNTO95613 3336 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 PLXNA1Q9UIW2 1896 aa20.71■□□□□ 0.91
TRAPPC4-203ENST00000447216 SLC25A27O95847 323 aa20.7■□□□□ 0.9
TRAPPC4-203ENST00000447216 NLRP5P59047 1200 aa20.7■□□□□ 0.9
TRAPPC4-203ENST00000447216 CCNA1P78396 465 aa20.7■□□□□ 0.9
TRAPPC4-203ENST00000447216 TRAF1Q13077 416 aa20.7■□□□□ 0.9
TRAPPC4-203ENST00000447216 CFHR5Q9BXR6 569 aa20.7■□□□□ 0.9
TRAPPC4-203ENST00000447216 SH3GLB2Q9NR46 395 aa20.7■□□□□ 0.9
TRAPPC4-203ENST00000447216 KIF3AQ9Y496 699 aa20.7■□□□□ 0.9
TRAPPC4-203ENST00000447216 SMCO2A6NFE2 343 aa20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 TRIM29Q14134 588 aa20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 LARP1BQ659C4 914 aaKnown RBP20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 KRT40Q6A162 431 aa20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 PPP1R18Q6NYC8 613 aa20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 SHCBP1Q8NEM2 672 aa20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 CCDC148Q8NFR7 591 aa20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 IPO9Q96P70 1041 aaKnown RBP20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 ACAD9Q9H845 621 aa20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 WBP1LQ9NX94 342 aa20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 SAGE1Q9NXZ1 904 aa20.69■□□□□ 0.9
TRAPPC4-203ENST00000447216 XBP1P17861 261 aa20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 COPB2P35606 906 aa20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 ADCY7P51828 1080 aa20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 UBE2SQ16763 222 aa20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 NSMFQ6X4W1 530 aa20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 CCAR1Q8IX12 1150 aaKnown RBP20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 CHST13Q8NET6 341 aa20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 CCDC12Q8WUD4 166 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 BEGAINQ9BUH8 593 aa20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 PHF20Q9BVI0 1012 aa20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 MROH8Q9H579 483 aa20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 CWC22Q9HCG8 908 aaKnown RBP20.68■□□□□ 0.9
TRAPPC4-203ENST00000447216 MYH7BA7E2Y1 1941 aa20.67■□□□□ 0.9
TRAPPC4-203ENST00000447216 CFBP00751 764 aa20.67■□□□□ 0.9
TRAPPC4-203ENST00000447216 SYT1P21579 422 aa20.67■□□□□ 0.9
TRAPPC4-203ENST00000447216 NPY5RQ15761 445 aa20.67■□□□□ 0.9
TRAPPC4-203ENST00000447216 ZMYND12Q9H0C1 365 aa20.67■□□□□ 0.9
TRAPPC4-203ENST00000447216 PSTPIP2Q9H939 334 aa20.67■□□□□ 0.9
TRAPPC4-203ENST00000447216 RIC8AQ9NPQ8 531 aa20.67■□□□□ 0.9
TRAPPC4-203ENST00000447216 MCM3APO60318 1980 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 CASP8AP2Q9UKL3 1982 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 ESYT2A0FGR8 921 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 H3BQV1 296 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 GPR25O00155 361 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 CTGFP29279 349 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 HOXA13P31271 388 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 IFFO2Q5TF58 517 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 USP17L6PQ6QN14 398 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 SLC30A10Q6XR72 485 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 FBXO18Q8NFZ0 1043 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 RASGRP4Q8TDF6 673 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 CUL5Q93034 780 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 MMP19Q99542 508 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 ARHGAP39Q9C0H5 1083 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 C6orf50Q9HD87 102 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 A1CFQ9NQ94 594 aaKnown RBP20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 FBXO40Q9UH90 709 aa20.66■□□□□ 0.9
TRAPPC4-203ENST00000447216 VPS37CA5D8V6 355 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 MMP1P03956 469 aa20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 PDCP20941 246 aa20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 MAPK4P31152 587 aa20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 SP3Q02447 781 aa20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 BAATQ14032 418 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 GPR142Q7Z601 462 aa20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 PLEKHH3Q7Z736 793 aa20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 MCF2L2Q86YR7 1114 aa20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 ANKRD35Q8N283 1001 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms