RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 RGS22Q8NE09 1264 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 DDX11Q96FC9 970 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 ZNF333Q96JL9 665 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 AMNQ9BXJ7 453 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 UPF2Q9HAU5 1272 aaKnown RBP25.51■■□□□ 1.67
APOE-204ENST00000446996 PFASO15067 1338 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 PNMA6FA0A0J9YX94 578 aa25.5■■□□□ 1.67
APOE-204ENST00000446996 IGHA2P01877 340 aa25.5■■□□□ 1.67
APOE-204ENST00000446996 RTN1Q16799 776 aa25.5■■□□□ 1.67
APOE-204ENST00000446996 ZNF792Q3KQV3 632 aa25.5■■□□□ 1.67
APOE-204ENST00000446996 SRBD1Q8N5C6 995 aaKnown RBP25.5■■□□□ 1.67
APOE-204ENST00000446996 IL27Q8NEV9 243 aa25.5■■□□□ 1.67
APOE-204ENST00000446996 NPLOC4Q8TAT6 608 aa25.5■■□□□ 1.67
APOE-204ENST00000446996 ZNF274Q96GC6 653 aaPredicted RBP25.5■■□□□ 1.67
APOE-204ENST00000446996 C22orf23Q9BZE7 217 aa25.5■■□□□ 1.67
APOE-204ENST00000446996 GOLGA8AA7E2F4 631 aa25.49■■□□□ 1.67
APOE-204ENST00000446996 GOLGA8BA8MQT2 603 aa25.49■■□□□ 1.67
APOE-204ENST00000446996 RXRAP19793 462 aa25.49■■□□□ 1.67
APOE-204ENST00000446996 ANKRD1Q15327 319 aa25.49■■□□□ 1.67
APOE-204ENST00000446996 MUM1L1Q5H9M0 696 aa25.49■■□□□ 1.67
APOE-204ENST00000446996 MSL3Q8N5Y2 521 aaKnown RBP25.49■■□□□ 1.67
APOE-204ENST00000446996 SAMD3Q8N6K7 520 aa25.49■■□□□ 1.67
APOE-204ENST00000446996 TRIB2Q92519 343 aa25.49■■□□□ 1.67
APOE-204ENST00000446996 PIGSQ96S52 555 aa25.49■■□□□ 1.67
APOE-204ENST00000446996 A1CFQ9NQ94 594 aaKnown RBP25.49■■□□□ 1.67
APOE-204ENST00000446996 HOMER2Q9NSB8 354 aa25.49■■□□□ 1.67
APOE-204ENST00000446996 MRPL11Q9Y3B7 192 aaKnown RBP25.49■■□□□ 1.67
APOE-204ENST00000446996 ELNP15502 786 aa25.48■■□□□ 1.67
APOE-204ENST00000446996 METAP2P50579 478 aaKnown RBP eCLIP25.48■■□□□ 1.67
APOE-204ENST00000446996 ZNF467Q7Z7K2 595 aaPredicted RBP25.48■■□□□ 1.67
APOE-204ENST00000446996 CCDC144CPQ8IYA2 1237 aa25.48■■□□□ 1.67
APOE-204ENST00000446996 SH3TC2Q8TF17 1288 aa25.48■■□□□ 1.67
APOE-204ENST00000446996 CLEC4DQ8WXI8 215 aa25.48■■□□□ 1.67
APOE-204ENST00000446996 RRP36Q96EU6 259 aaKnown RBP25.48■■□□□ 1.67
APOE-204ENST00000446996 CCDC85CA6NKD9 419 aa25.47■■□□□ 1.67
APOE-204ENST00000446996 PLEKHA8P1O95397 391 aa25.47■■□□□ 1.67
APOE-204ENST00000446996 MCF2L2Q86YR7 1114 aa25.47■■□□□ 1.67
APOE-204ENST00000446996 MAML3Q96JK9 1138 aa25.47■■□□□ 1.67
APOE-204ENST00000446996 FAM217BQ9NTX9 383 aaPredicted RBP25.47■■□□□ 1.67
APOE-204ENST00000446996 CYP39A1Q9NYL5 469 aa25.47■■□□□ 1.67
APOE-204ENST00000446996 BIN2Q9UBW5 565 aaPredicted RBP25.47■■□□□ 1.67
APOE-204ENST00000446996 INHAP05111 366 aa25.46■■□□□ 1.67
APOE-204ENST00000446996 PGK2P07205 417 aa25.46■■□□□ 1.67
APOE-204ENST00000446996 PDIA3P30101 505 aaKnown RBP25.46■■□□□ 1.67
APOE-204ENST00000446996 MAP3K21Q5TCX8 1036 aa25.46■■□□□ 1.67
APOE-204ENST00000446996 MFSD14CQ5VZR4 134 aa25.46■■□□□ 1.67
APOE-204ENST00000446996 RAB11FIP4Q86YS3 637 aa25.46■■□□□ 1.67
APOE-204ENST00000446996 FAM133AQ8N9E0 248 aa25.46■■□□□ 1.67
APOE-204ENST00000446996 BACH2Q9BYV9 841 aa25.46■■□□□ 1.67
APOE-204ENST00000446996 MAP3K20Q9NYL2 800 aaKnown RBP25.46■■□□□ 1.67
APOE-204ENST00000446996 LOC102724159A0A0B4J2E5 919 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 POTEB2H3BUK9 544 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 CAPN2P17655 700 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 GHRHRQ02643 423 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 PWP2Q15269 919 aaKnown RBP25.45■■□□□ 1.66
APOE-204ENST00000446996 CCL14Q16627 93 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 USH1GQ495M9 461 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 MAMDC4Q6UXC1 1216 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 HOMER1Q86YM7 354 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 FLRT1Q9NZU1 646 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 SEC63Q9UGP8 760 aaKnown RBP25.45■■□□□ 1.66
APOE-204ENST00000446996 NRBP1Q9UHY1 535 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 NAP1L2Q9ULW6 460 aaPredicted RBP25.45■■□□□ 1.66
APOE-204ENST00000446996 PCDHA1Q9Y5I3 950 aa25.45■■□□□ 1.66
APOE-204ENST00000446996 NFIBO00712 420 aa25.44■■□□□ 1.66
APOE-204ENST00000446996 PPP1R11O60927 126 aaPredicted RBP25.44■■□□□ 1.66
APOE-204ENST00000446996 CDC27P30260 824 aa25.44■■□□□ 1.66
APOE-204ENST00000446996 FUT2Q10981 343 aa25.44■■□□□ 1.66
APOE-204ENST00000446996 NSMFQ6X4W1 530 aa25.44■■□□□ 1.66
APOE-204ENST00000446996 HTTP42858 3142 aa25.43■■□□□ 1.66
APOE-204ENST00000446996 RPTORQ8N122 1335 aa25.43■■□□□ 1.66
APOE-204ENST00000446996 NEK4P51957 841 aa25.43■■□□□ 1.66
APOE-204ENST00000446996 RNF207Q6ZRF8 634 aa25.43■■□□□ 1.66
APOE-204ENST00000446996 TINF2Q9BSI4 451 aa25.43■■□□□ 1.66
APOE-204ENST00000446996 RBM27Q9P2N5 1060 aaKnown RBP25.43■■□□□ 1.66
APOE-204ENST00000446996 CNTNAP5Q8WYK1 1306 aa25.42■■□□□ 1.66
APOE-204ENST00000446996 SYNGAP1Q96PV0 1343 aa25.42■■□□□ 1.66
APOE-204ENST00000446996 RBBP6Q7Z6E9 1792 aaKnown RBP25.42■■□□□ 1.66
APOE-204ENST00000446996 ADD1P35611 737 aaKnown RBP25.42■■□□□ 1.66
APOE-204ENST00000446996 BAATQ14032 418 aaPredicted RBP25.42■■□□□ 1.66
APOE-204ENST00000446996 CMTR1Q8N1G2 835 aaKnown RBP25.42■■□□□ 1.66
APOE-204ENST00000446996 KIF2CQ99661 725 aa25.42■■□□□ 1.66
APOE-204ENST00000446996 TMEM106CQ9BVX2 250 aa25.42■■□□□ 1.66
APOE-204ENST00000446996 hCG_1984214I3L0E3 225 aa25.41■■□□□ 1.66
APOE-204ENST00000446996 TAL1P17542 331 aaPredicted RBP25.41■■□□□ 1.66
APOE-204ENST00000446996 AK2P54819 239 aa25.41■■□□□ 1.66
APOE-204ENST00000446996 CACNB2Q08289 660 aaPredicted RBP25.41■■□□□ 1.66
APOE-204ENST00000446996 ZNF713Q8N859 430 aaPredicted RBP25.41■■□□□ 1.66
APOE-204ENST00000446996 HMX1Q9NP08 348 aaPredicted RBP25.41■■□□□ 1.66
APOE-204ENST00000446996 ADD3Q9UEY8 706 aaKnown RBP25.41■■□□□ 1.66
APOE-204ENST00000446996 LCTP09848 1927 aa25.4■■□□□ 1.66
APOE-204ENST00000446996 PTPDC1A2A3K4 754 aa25.4■■□□□ 1.66
APOE-204ENST00000446996 ASB14A6NK59 587 aa25.4■■□□□ 1.66
APOE-204ENST00000446996 CCL5P13501 91 aa25.4■■□□□ 1.66
APOE-204ENST00000446996 PRKAR2AP13861 404 aaKnown RBP25.4■■□□□ 1.66
APOE-204ENST00000446996 IFNAR1P17181 557 aa25.4■■□□□ 1.66
APOE-204ENST00000446996 RPS6P62753 249 aaKnown RBP25.4■■□□□ 1.66
APOE-204ENST00000446996 MTFR1Q15390 333 aa25.4■■□□□ 1.66
APOE-204ENST00000446996 NTRK3Q16288 839 aa25.4■■□□□ 1.66
APOE-204ENST00000446996 TEX2Q8IWB9 1127 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms