RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ZNF292O60281 2723 aa8.68□□□□□ -1.02
HDAC9-216ENST00000446646 A0A0G2JMZ2 1700 aa8.68□□□□□ -1.02
HDAC9-216ENST00000446646 EP300Q09472 2414 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-216ENST00000446646 CD4P01730 458 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 ATP2A2P16615 1042 aaKnown RBP8.67□□□□□ -1.02
HDAC9-216ENST00000446646 FLT1P17948 1338 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 ATRXP46100 2492 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 CCDC174Q6PII3 467 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 NCAPG2Q86XI2 1143 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 TGFBRAP1Q8WUH2 860 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 SCLYQ96I15 445 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 SPSB2Q99619 263 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 TINF2Q9BSI4 451 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 SLC6A16Q9GZN6 736 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 USP44Q9H0E7 712 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 HMG20BQ9P0W2 317 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 ZNF236Q9UL36 1845 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 SLC4A7Q9Y6M7 1214 aa8.67□□□□□ -1.02
HDAC9-216ENST00000446646 MYO7AQ13402 2215 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 GRIN2DO15399 1336 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 A0A1W2PRG0 241 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 LCHNA4D1U4 455 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 ZBBXA8MT70 800 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 ARVCFO00192 962 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 CTAGE5O15320 804 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 STRNO43815 780 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 KRT37O76014 449 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 ASGR1P07306 291 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 KCNA5P22460 613 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 TCF15Q12870 199 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 PLS1Q14651 629 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 RAB3GAP1Q15042 981 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 CSPP1Q1MSJ5 1256 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 ZNF792Q3KQV3 632 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 CCDC184Q52MB2 194 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 TMCO2Q7Z6W1 182 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-216ENST00000446646 GDPD5Q8WTR4 605 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 TSEN34Q9BSV6 310 aaKnown RBP8.66□□□□□ -1.02
HDAC9-216ENST00000446646 KIAA1683Q9H0B3 1180 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 TRPV6Q9H1D0 765 aa8.66□□□□□ -1.02
HDAC9-216ENST00000446646 UBE2ZQ9H832 354 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-216ENST00000446646 ALG13Q9NP73 1137 aaKnown RBP8.66□□□□□ -1.02
HDAC9-216ENST00000446646 AATFQ9NY61 560 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC9-216ENST00000446646 PKD1L2Q7Z442 2459 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 ROBO3Q96MS0 1386 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-216ENST00000446646 MOXD2PA6NHM9 499 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 DCXO43602 365 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 SNAI1O95863 264 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-216ENST00000446646 AKR1A1P14550 325 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 TMEM67Q5HYA8 995 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 Q6ZNB5 142 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 CRACR2BQ8N4Y2 399 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-216ENST00000446646 ZGPATQ8N5A5 531 aaKnown RBP8.65□□□□□ -1.02
HDAC9-216ENST00000446646 SHCBP1Q8NEM2 672 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 NUP133Q8WUM0 1156 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 VTI1AQ96AJ9 217 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 ATG4CQ96DT6 458 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 NOC4LQ9BVI4 516 aaKnown RBP8.65□□□□□ -1.02
HDAC9-216ENST00000446646 HIPK3Q9H422 1215 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 FAM217BQ9NTX9 383 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-216ENST00000446646 CEP126Q9P2H0 1117 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 SLC27A5Q9Y2P5 690 aa8.65□□□□□ -1.02
HDAC9-216ENST00000446646 ELP1O95163 1332 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 IL16Q14005 1332 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 PDS5AQ29RF7 1337 aaKnown RBP8.64□□□□□ -1.03
HDAC9-216ENST00000446646 GFRA3O60609 400 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 C6orf222P0C671 652 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-216ENST00000446646 ALADP13716 330 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 CD46P15529 392 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 DYNLL1P63167 89 aaKnown RBP8.64□□□□□ -1.03
HDAC9-216ENST00000446646 BEX3Q00994 111 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 TMEM132BQ14DG7 1078 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 LEXMQ3ZCV2 418 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 SPTY2D1Q68D10 685 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-216ENST00000446646 CLEC10AQ8IUN9 316 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 FOXP4Q8IVH2 680 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-216ENST00000446646 XAGE2Q96GT9 111 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 AGBL1Q96MI9 1066 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 GLT1D1Q96MS3 346 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 KCNH6Q9H252 994 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 DHX36Q9H2U1 1008 aaKnown RBP8.64□□□□□ -1.03
HDAC9-216ENST00000446646 RAI14Q9P0K7 980 aa8.64□□□□□ -1.03
HDAC9-216ENST00000446646 ANKRD11Q6UB99 2663 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-216ENST00000446646 CEP250Q9BV73 2442 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 A0A0U1RQG5 324 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-216ENST00000446646 H3BQ06 376 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-216ENST00000446646 FCER1AP12319 257 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 SLC19A1P41440 591 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 COG2Q14746 738 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 LAPTM4AQ15012 233 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 SEPT2Q15019 361 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 PTCRAQ6ISU1 281 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-216ENST00000446646 TATDN1Q6P1N9 297 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 CXCL17Q6UXB2 119 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 DEFB128Q7Z7B8 93 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 WDR63Q8IWG1 891 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 ABRAQ8N0Z2 381 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 MMP19Q99542 508 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 TANGO6Q9C0B7 1094 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms