RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 CDK8P49336 464 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 ACVR2BQ13705 512 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 DDX11Q96FC9 970 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 SLC4A5Q9BY07 1137 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 PPP1R12CQ9BZL4 782 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 NKX2-4Q9H2Z4 354 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 ABHD16BQ9H3Z7 469 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 KANSL2Q9H9L4 492 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 SLC28A3Q9HAS3 691 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 SPC25Q9HBM1 224 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 GOPCQ9HD26 462 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 ATP8A2Q9NTI2 1148 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 ZNF532Q9HCE3 1301 aa11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 C6orf222P0C671 652 aaPredicted RBP11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 C12orf60Q5U649 245 aa11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 ERC1Q8IUD2 1116 aa11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 LCORLQ8N3X6 602 aa11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 SLC43A3Q8NBI5 491 aa11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 VTI1AQ96AJ9 217 aa11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 TEX13BQ9BXU2 312 aa11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 ZHX1Q9UKY1 873 aaPredicted RBP11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 YBX2Q9Y2T7 364 aaKnown RBP11.89□□□□□ -0.51
UBE2D4-206ENST00000446008 ATP2A1O14983 1001 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 CTAGE5O15320 804 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 ADCY6O43306 1168 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 POU3F3P20264 500 aaPredicted RBP11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 CYP2C18P33260 490 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 AAK1Q2M2I8 961 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 CCDC144BQ3MJ40 725 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 GNASQ5JWF2 1037 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 FAM83BQ5T0W9 1011 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 ZKSCAN2Q63HK3 967 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 AACSQ86V21 672 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 SEZ6LQ9BYH1 1024 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 C1orf115Q9H7X2 142 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 ARMT1Q9H993 441 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 RIPK3Q9Y572 518 aa11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 PRRC2BQ5JSZ5 2229 aaKnown RBP11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 GREB1LQ9C091 1923 aaPredicted RBP11.88□□□□□ -0.51
UBE2D4-206ENST00000446008 SMIM22K7EJ46 135 aa11.87□□□□□ -0.51
UBE2D4-206ENST00000446008 APBB1O00213 710 aa11.87□□□□□ -0.51
UBE2D4-206ENST00000446008 PRKAB2O43741 272 aa11.87□□□□□ -0.51
UBE2D4-206ENST00000446008 SNRNP48Q6IEG0 339 aaKnown RBP11.87□□□□□ -0.51
UBE2D4-206ENST00000446008 PRPF38AQ8NAV1 312 aaKnown RBP11.87□□□□□ -0.51
UBE2D4-206ENST00000446008 FGD4Q96M96 766 aa11.87□□□□□ -0.51
UBE2D4-206ENST00000446008 SLF1Q9BQI6 1058 aa11.87□□□□□ -0.51
UBE2D4-206ENST00000446008 PCDHA11Q9Y5I1 949 aa11.87□□□□□ -0.51
UBE2D4-206ENST00000446008 USP17L12C9JPN9 530 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 USP17L21D6R901 530 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 ERC2O15083 957 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 HRO43593 1189 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 CABYRO75952 493 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 PROX2Q3B8N5 592 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 AMOTL1Q8IY63 956 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 NECAB3Q96P71 396 aaPredicted RBP11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 KATNBL1Q9H079 304 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 HIPK3Q9H422 1215 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
UBE2D4-206ENST00000446008 CYP2D7A0A087X1C5 515 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 GOLIM4O00461 696 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 ZBED4O75132 1171 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 MBD4O95243 580 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 ADD2P35612 726 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 TFF2Q03403 129 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 CEP85Q6P2H3 762 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 ARMCX2Q7L311 632 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 OTOP2Q7RTS6 562 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 RPUSD2Q8IZ73 545 aaKnown RBP11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 CHST13Q8NET6 341 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 LRFN3Q9BTN0 628 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 FBXO40Q9UH90 709 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 EXOC6BQ9Y2D4 811 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 SLC4A7Q9Y6M7 1214 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 UMODL1Q5DID0 1318 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
UBE2D4-206ENST00000446008 MYH4Q9Y623 1939 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 F5H6K3 240 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 RABGGTBP53611 331 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 CCL23P55773 120 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 KLRC3Q07444 240 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 ITGA7Q13683 1181 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 HSP90AB4PQ58FF6 505 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 PPP2R2DQ66LE6 453 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 CTR9Q6PD62 1173 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 ANKRD35Q8N283 1001 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 RHPN1Q8TCX5 695 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 VWCEQ96DN2 955 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 NOC4LQ9BVI4 516 aaKnown RBP11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 EPHX3Q9H6B9 360 aa11.84□□□□□ -0.51
UBE2D4-206ENST00000446008 SLC38A10Q9HBR0 1119 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms