RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 KCNN1Q92952 543 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 CALML4Q96GE6 196 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 TEPSINQ96N21 525 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 AIFM3Q96NN9 605 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 GPR101Q96P66 508 aaPredicted RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 MTMR9Q96QG7 549 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 MYL10Q9BUA6 226 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 TIPINQ9BVW5 301 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF341Q9BYN7 854 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 GZF1Q9H116 711 aaPredicted RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 RBSNQ9H1K0 784 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 PSTPIP2Q9H939 334 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 GDPD2Q9HCC8 539 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 ADARB2Q9NS39 739 aaKnown RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 KBTBD4Q9NVX7 518 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 GPRC5DQ9NZD1 345 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 SAP30BPQ9UHR5 308 aaKnown RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 CNOT7Q9UIV1 285 aaKnown RBP3.2□□□□□ -1.9
LINC00393-201ENST00000443621 ZBTB21Q9ULJ3 1066 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 PCDHA6Q9UN73 950 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 ADAMTS5Q9UNA0 930 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 KCNJ14Q9UNX9 436 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 PCDHB6Q9Y5E3 794 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 PCDHA8Q9Y5H6 950 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 MRVI1Q9Y6F6 885 aa3.2□□□□□ -1.9
LINC00393-201ENST00000443621 FRMPD4Q14CM0 1322 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 A0A1B0GVL5 298 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 IQCA1LA6NCM1 817 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 SPDYE3A6NKU9 549 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 B4DLN1 442 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 F8W031 263 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 MPHOSPH10O00566 681 aaKnown RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 CXCL11O14625 94 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 MEIS2O14770 477 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 POLR2DO15514 142 aaKnown RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 ACTN4O43707 911 aaKnown RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF500O60304 480 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 DKC1O60832 514 aaKnown RBP eCLIP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 RAD17O75943 681 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 RHOBTB3O94955 611 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 FGFR1OPO95684 399 aaKnown RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 NDUFB10O96000 172 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 GH2P01242 217 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 ICAM1P05362 532 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 ATXN8OSP0DMR3 200 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 MARCKSP29966 332 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 CLCN1P35523 988 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 HSD17B4P51659 736 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 BACE1P56817 501 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 MCCD1P59942 119 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 SNRPFP62306 86 aaKnown RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 FKBP1BP68106 108 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 SETQ01105 290 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 MYL5Q02045 173 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 GUCY1B3Q02153 619 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PABPC4Q13310 644 aaKnown RBP eCLIP3.19□□□□□ -1.91e-10■■■■■ 123
LINC00393-201ENST00000443621 STIM1Q13586 685 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 MORC3Q14149 939 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 HSP90AA2PQ14568 343 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 RASA3Q14644 834 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 KIF4BQ2VIQ3 1234 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 LONRF3Q496Y0 759 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 ANO6Q4KMQ2 910 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF658Q5TYW1 1059 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 FOXD4L5Q5VV16 416 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 HAUS3Q68CZ6 603 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 TYW1BQ6NUM6 668 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PIK3AP1Q6ZUJ8 805 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 HEATR3Q7Z4Q2 680 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PNMA8AQ86V59 439 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 ZSCAN30Q86W11 494 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PLA2G4DQ86XP0 818 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 SCYL3Q8IZE3 742 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 CCDC82Q8N4S0 544 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 SLC44A5Q8NCS7 719 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 SLC17A8Q8NDX2 589 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 CCDC112Q8NEF3 446 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 OXER1Q8TDS5 423 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 TBCKQ8TEA7 893 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 CNKSR2Q8WXI2 1034 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 FOXD4L4Q8WXT5 416 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 SYMPKQ92797 1274 aaKnown RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 SMARCE1Q969G3 411 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 FBXW7Q969H0 707 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 SHISA4Q96DD7 197 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 KLRG1Q96E93 195 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 DHTKD1Q96HY7 919 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 CDHR1Q96JP9 859 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PIGSQ96S52 555 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 RIT2Q99578 217 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 C7orf25Q9BPX7 421 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 POLR3CQ9BUI4 534 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 WDR11Q9BZH6 1224 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 TANGO6Q9C0B7 1094 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 CSRNP2Q9H175 543 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 GOLPH3LQ9H4A5 285 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 KCNMB3Q9NPA1 279 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 DISC1Q9NRI5 854 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF277Q9NRM2 450 aaPredicted RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 BMP2KQ9NSY1 1161 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms