RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-208ENST00000443046 ACAD9Q9H845 621 aa17.2■□□□□ 0.34
HMGN1-208ENST00000443046 Q9Y3F1 56 aa17.2■□□□□ 0.34
HMGN1-208ENST00000443046 SLC4A7Q9Y6M7 1214 aa17.2■□□□□ 0.34
HMGN1-208ENST00000443046 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 TTLL1O95922 423 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 PTGS1P23219 599 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 TFF2Q03403 129 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 PPP2R2DQ66LE6 453 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 IQSEC1Q6DN90 963 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 STK11IPQ8N1F8 1099 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 IL27Q8NEV9 243 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 OSBP2Q969R2 916 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 C1QTNF1Q9BXJ1 281 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-208ENST00000443046 HOMER2Q9NSB8 354 aa17.19■□□□□ 0.34
HMGN1-208ENST00000443046 PLIN4Q96Q06 1357 aa17.18■□□□□ 0.34
HMGN1-208ENST00000443046 LCTP09848 1927 aa17.18■□□□□ 0.34
HMGN1-208ENST00000443046 ERC2O15083 957 aa17.18■□□□□ 0.34
HMGN1-208ENST00000443046 DYNC1LI2O43237 492 aaPredicted RBP17.18■□□□□ 0.34
HMGN1-208ENST00000443046 BMP3P12645 472 aa17.18■□□□□ 0.34
HMGN1-208ENST00000443046 TKFCQ3LXA3 575 aa17.18■□□□□ 0.34
HMGN1-208ENST00000443046 TMEM63BQ5T3F8 832 aa17.18■□□□□ 0.34
HMGN1-208ENST00000443046 MORC4Q8TE76 937 aa17.18■□□□□ 0.34
HMGN1-208ENST00000443046 PDGFCQ9NRA1 345 aa17.18■□□□□ 0.34
HMGN1-208ENST00000443046 RNF146Q9NTX7 359 aa17.18■□□□□ 0.34
HMGN1-208ENST00000443046 ARIH1Q9Y4X5 557 aaPredicted RBP17.18■□□□□ 0.34
HMGN1-208ENST00000443046 TMEM232C9JQI7 657 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 ZEB2O60315 1214 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 PLA2G6O60733 806 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 PRDM1O75626 825 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 ATP2A2P16615 1042 aaKnown RBP17.17■□□□□ 0.34
HMGN1-208ENST00000443046 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-208ENST00000443046 KCNQ1P51787 676 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 PSMC6P62333 389 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 AAK1Q2M2I8 961 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 SLFN13Q68D06 897 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 NOL8Q76FK4 1167 aaKnown RBP17.17■□□□□ 0.34
HMGN1-208ENST00000443046 ZNF444Q8N0Y2 327 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-208ENST00000443046 LRRC47Q8N1G4 583 aaKnown RBP17.17■□□□□ 0.34
HMGN1-208ENST00000443046 NEDD1Q8NHV4 660 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 SCLYQ96I15 445 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 GMCL1Q96IK5 515 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 AP5M1Q9H0R1 490 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 BCL11AQ9H165 835 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 ALDH8A1Q9H2A2 487 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-208ENST00000443046 ZNF287Q9HBT7 754 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 MTCH2Q9Y6C9 303 aa17.17■□□□□ 0.34
HMGN1-208ENST00000443046 DDX49Q9Y6V7 483 aaKnown RBP17.17■□□□□ 0.34
HMGN1-208ENST00000443046 PFKMP08237 780 aa17.16■□□□□ 0.34
HMGN1-208ENST00000443046 STAT2P52630 851 aa17.16■□□□□ 0.34
HMGN1-208ENST00000443046 TTLL4Q14679 1199 aa17.16■□□□□ 0.34
HMGN1-208ENST00000443046 KBTBD3Q8NAB2 608 aa17.16■□□□□ 0.34
HMGN1-208ENST00000443046 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
HMGN1-208ENST00000443046 APPBP2Q92624 585 aa17.16■□□□□ 0.34
HMGN1-208ENST00000443046 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
HMGN1-208ENST00000443046 COG6Q9Y2V7 657 aa17.16■□□□□ 0.34
HMGN1-208ENST00000443046 SCN5AQ14524 2016 aa17.16■□□□□ 0.34
HMGN1-208ENST00000443046 MS4A1P11836 297 aa17.15■□□□□ 0.34
HMGN1-208ENST00000443046 FAM160B2Q86V87 743 aa17.15■□□□□ 0.34
HMGN1-208ENST00000443046 CHURC1Q8WUH1 139 aa17.15■□□□□ 0.34
HMGN1-208ENST00000443046 TRERF1Q96PN7 1200 aa17.15■□□□□ 0.34
HMGN1-208ENST00000443046 VTA1Q9NP79 307 aa17.15■□□□□ 0.34
HMGN1-208ENST00000443046 CYP39A1Q9NYL5 469 aa17.15■□□□□ 0.34
HMGN1-208ENST00000443046 EPOPA6NHQ4 379 aa17.14■□□□□ 0.33
HMGN1-208ENST00000443046 RFXAPO00287 272 aa17.14■□□□□ 0.33
HMGN1-208ENST00000443046 RNF113AO15541 343 aaKnown RBP17.14■□□□□ 0.33
HMGN1-208ENST00000443046 GPAA1O43292 621 aa17.14■□□□□ 0.33
HMGN1-208ENST00000443046 CA3P07451 260 aa17.14■□□□□ 0.33
HMGN1-208ENST00000443046 GNAT2P19087 354 aa17.14■□□□□ 0.33
HMGN1-208ENST00000443046 DUSP28Q4G0W2 176 aa17.14■□□□□ 0.33
HMGN1-208ENST00000443046 MUM1L1Q5H9M0 696 aa17.14■□□□□ 0.33
HMGN1-208ENST00000443046 TMEM67Q5HYA8 995 aa17.14■□□□□ 0.33
HMGN1-208ENST00000443046 FBXO16Q8IX29 292 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-208ENST00000443046 ECHDC1Q9NTX5 307 aa17.14■□□□□ 0.33
HMGN1-208ENST00000443046 TRMT13Q9NUP7 481 aaKnown RBP17.14■□□□□ 0.33
HMGN1-208ENST00000443046 SCN10AQ9Y5Y9 1956 aa17.14■□□□□ 0.33
HMGN1-208ENST00000443046 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
HMGN1-208ENST00000443046 PATL2C9JE40 543 aaKnown RBP17.13■□□□□ 0.33
HMGN1-208ENST00000443046 TLL1O43897 1013 aa17.13■□□□□ 0.33
HMGN1-208ENST00000443046 SUPT20HL2P0C7V6 817 aa17.13■□□□□ 0.33
HMGN1-208ENST00000443046 IFNL3Q8IZI9 196 aa17.13■□□□□ 0.33
HMGN1-208ENST00000443046 MICALL1Q8N3F8 863 aa17.13■□□□□ 0.33
HMGN1-208ENST00000443046 PHOSPHO2Q8TCD6 241 aa17.13■□□□□ 0.33
HMGN1-208ENST00000443046 LRRCC1Q9C099 1032 aa17.13■□□□□ 0.33
HMGN1-208ENST00000443046 COG5Q9UP83 839 aa17.13■□□□□ 0.33
HMGN1-208ENST00000443046 PIEZO1Q92508 2521 aa17.13■□□□□ 0.33
HMGN1-208ENST00000443046 BRWD1Q9NSI6 2320 aa17.13■□□□□ 0.33
HMGN1-208ENST00000443046 RBM47A0AV96 593 aaKnown RBP17.12■□□□□ 0.33
HMGN1-208ENST00000443046 M0R2C6 588 aa17.12■□□□□ 0.33
HMGN1-208ENST00000443046 TSPY3P0CV98 308 aa17.12■□□□□ 0.33
HMGN1-208ENST00000443046 TSPY8P0CW00 308 aa17.12■□□□□ 0.33
HMGN1-208ENST00000443046 CYP2C9P11712 490 aa17.12■□□□□ 0.33
HMGN1-208ENST00000443046 ALAS1P13196 640 aa17.12■□□□□ 0.33
HMGN1-208ENST00000443046 MCCP23508 829 aa17.12■□□□□ 0.33
HMGN1-208ENST00000443046 SLC1A4P43007 532 aa17.12■□□□□ 0.33
HMGN1-208ENST00000443046 TDO2P48775 406 aa17.12■□□□□ 0.33
HMGN1-208ENST00000443046 PURAQ00577 322 aaKnown RBP17.12■□□□□ 0.33
HMGN1-208ENST00000443046 TFAP4Q01664 338 aa17.12■□□□□ 0.33
HMGN1-208ENST00000443046 KIAA1211Q6ZU35 1233 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms