RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FCER1AP12319 257 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 ELNP15502 786 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 CYP2B6P20813 491 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 SMARCA1P28370 1054 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 GNAQP50148 359 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 METAP2P50579 478 aaKnown RBP eCLIP18.61■□□□□ 0.57
USP39-205ENST00000442708 TKFCQ3LXA3 575 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 ABRAQ8N0Z2 381 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 CHST13Q8NET6 341 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 RAET1EQ8TD07 263 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 SOCS4Q8WXH5 440 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 TPCN1Q9ULQ1 816 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 RBBP6Q7Z6E9 1792 aaKnown RBP18.6■□□□□ 0.57
USP39-205ENST00000442708 CNTNAP5Q8WYK1 1306 aa18.6■□□□□ 0.57
USP39-205ENST00000442708 NFIBO00712 420 aa18.6■□□□□ 0.57
USP39-205ENST00000442708 CCT2P78371 535 aaKnown RBP18.6■□□□□ 0.57
USP39-205ENST00000442708 CCL14Q16627 93 aa18.6■□□□□ 0.57
USP39-205ENST00000442708 FBXO11Q86XK2 927 aa18.6■□□□□ 0.57
USP39-205ENST00000442708 ZNF274Q96GC6 653 aaPredicted RBP18.6■□□□□ 0.57
USP39-205ENST00000442708 LZTS2Q9BRK4 669 aa18.6■□□□□ 0.57
USP39-205ENST00000442708 ACAD9Q9H845 621 aa18.6■□□□□ 0.57
USP39-205ENST00000442708 UPF2Q9HAU5 1272 aaKnown RBP18.6■□□□□ 0.57
USP39-205ENST00000442708 A1CFQ9NQ94 594 aaKnown RBP18.6■□□□□ 0.57
USP39-205ENST00000442708 RBM28Q9NW13 759 aaKnown RBP18.6■□□□□ 0.57
USP39-205ENST00000442708 FLRT1Q9NZU1 646 aa18.6■□□□□ 0.57
USP39-205ENST00000442708 DNAJC25-GNG10A0A024R161 153 aa18.59■□□□□ 0.57
USP39-205ENST00000442708 PNMA6FA0A0J9YX94 578 aa18.59■□□□□ 0.57
USP39-205ENST00000442708 ADCY3O60266 1144 aa18.59■□□□□ 0.57
USP39-205ENST00000442708 LARGE1O95461 756 aa18.59■□□□□ 0.57
USP39-205ENST00000442708 RGS2P41220 211 aa18.59■□□□□ 0.57
USP39-205ENST00000442708 STK3Q13188 491 aa18.59■□□□□ 0.57
USP39-205ENST00000442708 NOL8Q76FK4 1167 aaKnown RBP18.59■□□□□ 0.57
USP39-205ENST00000442708 SH3TC2Q8TF17 1288 aa18.59■□□□□ 0.57
USP39-205ENST00000442708 TRIB2Q92519 343 aa18.59■□□□□ 0.57
USP39-205ENST00000442708 PCDH10Q9P2E7 1040 aa18.59■□□□□ 0.57
USP39-205ENST00000442708 FBXO40Q9UH90 709 aa18.59■□□□□ 0.57
USP39-205ENST00000442708 CENPFP49454 3210 aa18.58■□□□□ 0.57
USP39-205ENST00000442708 OPLAHO14841 1288 aa18.58■□□□□ 0.56
USP39-205ENST00000442708 HOXC6P09630 235 aa18.58■□□□□ 0.56
USP39-205ENST00000442708 XRCC5P13010 732 aaKnown RBP18.58■□□□□ 0.56
USP39-205ENST00000442708 MLLT1Q03111 559 aaPredicted RBP18.58■□□□□ 0.56
USP39-205ENST00000442708 TRIM32Q13049 653 aa18.58■□□□□ 0.56
USP39-205ENST00000442708 KCTD2Q14681 263 aa18.58■□□□□ 0.56
USP39-205ENST00000442708 NTRK3Q16288 839 aa18.58■□□□□ 0.56
USP39-205ENST00000442708 TBC1D5Q92609 795 aa18.58■□□□□ 0.56
USP39-205ENST00000442708 RRP36Q96EU6 259 aaKnown RBP18.58■□□□□ 0.56
USP39-205ENST00000442708 FGD4Q96M96 766 aa18.58■□□□□ 0.56
USP39-205ENST00000442708 APBA2Q99767 749 aa18.58■□□□□ 0.56
USP39-205ENST00000442708 AMNQ9BXJ7 453 aa18.58■□□□□ 0.56
USP39-205ENST00000442708 TNRC18O15417 2968 aaPredicted RBP18.57■□□□□ 0.56
USP39-205ENST00000442708 ABCB11O95342 1321 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 DTNBO60941 627 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 PPFIA3O75145 1194 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 IGHA2P01877 340 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 GRK4P32298 578 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 CNTN2Q02246 1040 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 ZNF792Q3KQV3 632 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 DPP9Q86TI2 863 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 ANKRD35Q8N283 1001 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 PURBQ96QR8 312 aaKnown RBP18.57■□□□□ 0.56
USP39-205ENST00000442708 CYP39A1Q9NYL5 469 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 PCDHA1Q9Y5I3 950 aa18.57■□□□□ 0.56
USP39-205ENST00000442708 ASTN1O14525 1302 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 MCM3APO60318 1980 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 CCDC85CA6NKD9 419 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 SCRN1Q12765 414 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 PPP2R5BQ15173 497 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 ANKRD1Q15327 319 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 ME3Q16798 604 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 SLC9C1Q4G0N8 1177 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 NSMFQ6X4W1 530 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 SLC30A10Q6XR72 485 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 SLAIN1Q8ND83 568 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 PXYLP1Q8TE99 480 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 DDX11Q96FC9 970 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 PNMA2Q9UL42 364 aa18.56■□□□□ 0.56
USP39-205ENST00000442708 V9GY48 417 aaPredicted RBP18.56■□□□□ 0.56
USP39-205ENST00000442708 PFKFB2O60825 505 aa18.55■□□□□ 0.56
USP39-205ENST00000442708 BAATQ14032 418 aaPredicted RBP18.55■□□□□ 0.56
USP39-205ENST00000442708 RABEP1Q15276 862 aa18.55■□□□□ 0.56
USP39-205ENST00000442708 FAM133AQ8N9E0 248 aa18.55■□□□□ 0.56
USP39-205ENST00000442708 PHKBQ93100 1093 aa18.55■□□□□ 0.56
USP39-205ENST00000442708 ARMC5Q96C12 935 aa18.55■□□□□ 0.56
USP39-205ENST00000442708 MAML3Q96JK9 1138 aa18.55■□□□□ 0.56
USP39-205ENST00000442708 CCDC196A0A1B0GTZ2 297 aa18.54■□□□□ 0.56
USP39-205ENST00000442708 SOWAHBA6NEL2 793 aa18.54■□□□□ 0.56
USP39-205ENST00000442708 CD2BP2O95400 341 aaKnown RBP18.54■□□□□ 0.56
USP39-205ENST00000442708 IFNAR1P17181 557 aa18.54■□□□□ 0.56
USP39-205ENST00000442708 ST3GAL1Q11201 340 aa18.54■□□□□ 0.56
USP39-205ENST00000442708 NECAB1Q8N987 351 aa18.54■□□□□ 0.56
USP39-205ENST00000442708 GPKOWQ92917 476 aaPredicted RBP eCLIP18.54■□□□□ 0.56
USP39-205ENST00000442708 SEC63Q9UGP8 760 aaKnown RBP18.54■□□□□ 0.56
USP39-205ENST00000442708 MRPL11Q9Y3B7 192 aaKnown RBP18.54■□□□□ 0.56
USP39-205ENST00000442708 DDX49Q9Y6V7 483 aaKnown RBP18.54■□□□□ 0.56
USP39-205ENST00000442708 PFASO15067 1338 aa18.53■□□□□ 0.56
USP39-205ENST00000442708 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
USP39-205ENST00000442708 MYCP01106 439 aaPredicted RBP18.53■□□□□ 0.56
USP39-205ENST00000442708 INHAP05111 366 aa18.53■□□□□ 0.56
USP39-205ENST00000442708 RPS6P62753 249 aaKnown RBP18.53■□□□□ 0.56
USP39-205ENST00000442708 PKN1Q16512 942 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms