RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 DDX49Q9Y6V7 483 aaKnown RBP16.73■□□□□ 0.27
LINC00642-202ENST00000442515 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
LINC00642-202ENST00000442515 ACTN1P12814 892 aa16.72■□□□□ 0.27
LINC00642-202ENST00000442515 ADD2P35612 726 aa16.72■□□□□ 0.27
LINC00642-202ENST00000442515 OAZ1P54368 228 aa16.72■□□□□ 0.27
LINC00642-202ENST00000442515 HERC6Q8IVU3 1022 aa16.72■□□□□ 0.27
LINC00642-202ENST00000442515 PHOSPHO2Q8TCD6 241 aa16.72■□□□□ 0.27
LINC00642-202ENST00000442515 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.72■□□□□ 0.27
LINC00642-202ENST00000442515 DDRGK1Q96HY6 314 aa16.72■□□□□ 0.27
LINC00642-202ENST00000442515 NYAP2Q9P242 653 aa16.72■□□□□ 0.27
LINC00642-202ENST00000442515 TNKSO95271 1327 aa16.71■□□□□ 0.27
LINC00642-202ENST00000442515 SOWAHBA6NEL2 793 aa16.71■□□□□ 0.27
LINC00642-202ENST00000442515 ASB14A6NK59 587 aa16.71■□□□□ 0.27
LINC00642-202ENST00000442515 TMEM63BQ5T3F8 832 aa16.71■□□□□ 0.27
LINC00642-202ENST00000442515 CTR9Q6PD62 1173 aa16.71■□□□□ 0.27
LINC00642-202ENST00000442515 FBXO16Q8IX29 292 aaPredicted RBP16.71■□□□□ 0.27
LINC00642-202ENST00000442515 ACAD9Q9H845 621 aa16.71■□□□□ 0.27
LINC00642-202ENST00000442515 A1CFQ9NQ94 594 aaKnown RBP16.71■□□□□ 0.27
LINC00642-202ENST00000442515 PDGFCQ9NRA1 345 aa16.71■□□□□ 0.27
LINC00642-202ENST00000442515 KIF28PB7ZC32 967 aa16.7■□□□□ 0.26
LINC00642-202ENST00000442515 CHGBP05060 677 aa16.7■□□□□ 0.26
LINC00642-202ENST00000442515 SUPT20HL2P0C7V6 817 aa16.7■□□□□ 0.26
LINC00642-202ENST00000442515 RASA1P20936 1047 aa16.7■□□□□ 0.26
LINC00642-202ENST00000442515 ZKSCAN2Q63HK3 967 aa16.7■□□□□ 0.26
LINC00642-202ENST00000442515 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
LINC00642-202ENST00000442515 SNX27Q96L92 541 aa16.7■□□□□ 0.26
LINC00642-202ENST00000442515 FEM1BQ9UK73 627 aa16.7■□□□□ 0.26
LINC00642-202ENST00000442515 SLC4A4Q9Y6R1 1079 aa16.7■□□□□ 0.26
LINC00642-202ENST00000442515 MYH8P13535 1937 aa16.7■□□□□ 0.26
LINC00642-202ENST00000442515 MCM3APO60318 1980 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 RFC2P35250 354 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 TAPT1Q6NXT6 567 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 EEPD1Q7L9B9 569 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 GJD3Q8N144 294 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 GDPD5Q8WTR4 605 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 UIMC1Q96RL1 719 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 RNF146Q9NTX7 359 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 PAG1Q9NWQ8 432 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 ARPP21Q9UBL0 812 aaPredicted RBP16.69■□□□□ 0.26
LINC00642-202ENST00000442515 COG6Q9Y2V7 657 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 Q9Y3F1 56 aa16.69■□□□□ 0.26
LINC00642-202ENST00000442515 LCHNA4D1U4 455 aa16.68■□□□□ 0.26
LINC00642-202ENST00000442515 NHLH1Q02575 133 aa16.68■□□□□ 0.26
LINC00642-202ENST00000442515 IQSEC1Q6DN90 963 aa16.68■□□□□ 0.26
LINC00642-202ENST00000442515 ITPRIPQ8IWB1 547 aa16.68■□□□□ 0.26
LINC00642-202ENST00000442515 RHPN1Q8TCX5 695 aa16.68■□□□□ 0.26
LINC00642-202ENST00000442515 UBE2ZQ9H832 354 aaPredicted RBP16.68■□□□□ 0.26
LINC00642-202ENST00000442515 CLIP2Q9UDT6 1046 aa16.68■□□□□ 0.26
LINC00642-202ENST00000442515 USP34Q70CQ2 3546 aa16.68■□□□□ 0.26
LINC00642-202ENST00000442515 GREB1LQ9C091 1923 aaPredicted RBP16.67■□□□□ 0.26
LINC00642-202ENST00000442515 IGKV6D-41A0A0C4DH26 115 aa16.67■□□□□ 0.26
LINC00642-202ENST00000442515 FAM178BQ8IXR5 827 aa16.67■□□□□ 0.26
LINC00642-202ENST00000442515 STK11IPQ8N1F8 1099 aa16.67■□□□□ 0.26
LINC00642-202ENST00000442515 LRRC47Q8N1G4 583 aaKnown RBP16.67■□□□□ 0.26
LINC00642-202ENST00000442515 FTOQ9C0B1 505 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC00642-202ENST00000442515 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC00642-202ENST00000442515 MKNK2Q9HBH9 465 aa16.67■□□□□ 0.26
LINC00642-202ENST00000442515 LMCD1Q9NZU5 365 aa16.67■□□□□ 0.26
LINC00642-202ENST00000442515 BAZ2AQ9UIF9 1905 aaKnown RBP16.66■□□□□ 0.26
LINC00642-202ENST00000442515 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
LINC00642-202ENST00000442515 PITPNM1O00562 1244 aa16.66■□□□□ 0.26
LINC00642-202ENST00000442515 IQCF3P0C7M6 154 aa16.66■□□□□ 0.26
LINC00642-202ENST00000442515 SSTR3P32745 418 aaPredicted RBP16.66■□□□□ 0.26
LINC00642-202ENST00000442515 PURAQ00577 322 aaKnown RBP16.66■□□□□ 0.26
LINC00642-202ENST00000442515 UBE3CQ15386 1083 aa16.66■□□□□ 0.26
LINC00642-202ENST00000442515 LEXMQ3ZCV2 418 aa16.66■□□□□ 0.26
LINC00642-202ENST00000442515 FAM47CQ5HY64 1035 aa16.66■□□□□ 0.26
LINC00642-202ENST00000442515 FTSJ3Q8IY81 847 aaKnown RBP16.66■□□□□ 0.26
LINC00642-202ENST00000442515 CLASRPQ8N2M8 674 aaKnown RBP16.66■□□□□ 0.26
LINC00642-202ENST00000442515 BRWD1Q9NSI6 2320 aa16.66■□□□□ 0.26
LINC00642-202ENST00000442515 POLR3EQ9NVU0 708 aa16.66■□□□□ 0.26
LINC00642-202ENST00000442515 ZNF536O15090 1300 aa16.66■□□□□ 0.26
LINC00642-202ENST00000442515 COL4A4P53420 1690 aaPredicted RBP16.65■□□□□ 0.26
LINC00642-202ENST00000442515 BAIAP3O94812 1187 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 IFIT2P09913 472 aaKnown RBP16.65■□□□□ 0.26
LINC00642-202ENST00000442515 ALADP13716 330 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 IL9P15248 144 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 KCNA5P22460 613 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 DUSP28Q4G0W2 176 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 HSP90AB4PQ58FF6 505 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 KIAA1211Q6ZU35 1233 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 GMCL1P1Q8NEA9 526 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 CEP95Q96GE4 821 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 FBXL18Q96ME1 805 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 PUS7LQ9H0K6 701 aaKnown RBP16.65■□□□□ 0.26
LINC00642-202ENST00000442515 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 VTA1Q9NP79 307 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 MTUS1Q9ULD2 1270 aa16.65■□□□□ 0.26
LINC00642-202ENST00000442515 MYL3P08590 195 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 FDX1P10109 184 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 RLBP1P12271 317 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 BMP3P12645 472 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 KCNJ6P48051 423 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 CSPP1Q1MSJ5 1256 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 TKFCQ3LXA3 575 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 SLFN13Q68D06 897 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 TMCO2Q7Z6W1 182 aaPredicted RBP16.64■□□□□ 0.25
LINC00642-202ENST00000442515 RPAP2Q8IXW5 612 aaPredicted RBP16.64■□□□□ 0.25
LINC00642-202ENST00000442515 RETREG2Q8NC44 543 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms