RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 EDIL3O43854 480 aa19.34■□□□□ 0.69
TMEM39B-203ENST00000441402 USP2O75604 605 aaPredicted RBP19.34■□□□□ 0.69
TMEM39B-203ENST00000441402 CAVIN2O95810 425 aa19.34■□□□□ 0.69
TMEM39B-203ENST00000441402 AP3B2Q13367 1082 aa19.34■□□□□ 0.69
TMEM39B-203ENST00000441402 PPP4R3AQ6IN85 833 aa19.34■□□□□ 0.69
TMEM39B-203ENST00000441402 KRBA2Q6ZNG9 492 aa19.34■□□□□ 0.69
TMEM39B-203ENST00000441402 SULF1Q8IWU6 871 aa19.34■□□□□ 0.69
TMEM39B-203ENST00000441402 PRPF38AQ8NAV1 312 aaKnown RBP19.34■□□□□ 0.69
TMEM39B-203ENST00000441402 PICK1Q9NRD5 415 aa19.34■□□□□ 0.69
TMEM39B-203ENST00000441402 KIAA1468Q9P260 1216 aa19.34■□□□□ 0.69
TMEM39B-203ENST00000441402 C19orf81C9J6K1 198 aa19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 FOSP01100 380 aaPredicted RBP19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 BACE1P56817 501 aa19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 ZYXQ15942 572 aaKnown RBP19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 IL17AQ16552 155 aa19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 SPECC1Q5M775 1068 aa19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 ZNF280CQ8ND82 737 aa19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 ZKSCAN4Q969J2 545 aaPredicted RBP19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 C12orf42Q96LP6 360 aa19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 NAP1L4Q99733 375 aaKnown RBP19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 PYM1Q9BRP8 204 aaKnown RBP19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 USP25Q9UHP3 1055 aa19.33■□□□□ 0.68
TMEM39B-203ENST00000441402 VWA3AA6NCI4 1184 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 PIK3CDO00329 1044 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 CCNT1O60563 726 aaKnown RBP19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 FDX1P10109 184 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 USP11P51784 963 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 UBE2SQ16763 222 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 LETM2Q2VYF4 491 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 LONRF3Q496Y0 759 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 KANK3Q6NY19 840 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 DTHD1Q6ZMT9 781 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 TMEM60Q9H2L4 133 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 EMILIN3Q9NT22 766 aa19.32■□□□□ 0.68
TMEM39B-203ENST00000441402 GCFC2P16383 781 aaKnown RBP19.31■□□□□ 0.68
TMEM39B-203ENST00000441402 EPHX2P34913 555 aa19.31■□□□□ 0.68
TMEM39B-203ENST00000441402 SNAP25P60880 206 aa19.31■□□□□ 0.68
TMEM39B-203ENST00000441402 SPP2Q13103 211 aa19.31■□□□□ 0.68
TMEM39B-203ENST00000441402 USP49Q70CQ1 688 aa19.31■□□□□ 0.68
TMEM39B-203ENST00000441402 KIFC2Q96AC6 838 aa19.31■□□□□ 0.68
TMEM39B-203ENST00000441402 SCN4AP35499 1836 aa19.31■□□□□ 0.68
TMEM39B-203ENST00000441402 USP17L15C9J2P7 530 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 USP17L13C9JLJ4 530 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 USP17L11C9JVI0 530 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 USP17L18D6R9N7 530 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 USP17L22D6RA61 530 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 USP17L17D6RBQ6 530 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 USP17L19D6RCP7 530 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 USP17L20D6RJB6 530 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 OPLAHO14841 1288 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 POLR2DO15514 142 aaKnown RBP19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 NEMFO60524 1076 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 OR52Z1P0C646 297 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 MDM2Q00987 491 aaPredicted RBP19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 USP17L24Q0WX57 530 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 USP17L6PQ6QN14 398 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 MOXD1Q6UVY6 613 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 CNNM3Q8NE01 707 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 CRYGNQ8WXF5 182 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 SYMPKQ92797 1274 aaKnown RBP19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 EPSTI1Q96J88 318 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 AK8Q96MA6 479 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 MTMR9Q96QG7 549 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 SLF1Q9BQI6 1058 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 FBXO28Q9NVF7 368 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 HOOK1Q9UJC3 728 aaKnown RBP19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 TUBE1Q9UJT0 475 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 PNMA2Q9UL42 364 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 MRPL11Q9Y3B7 192 aaKnown RBP19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 PHIPQ8WWQ0 1821 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 CYP3A7-CYP3A51PA0A087WV96 503 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 PPP1R12BO60237 982 aaPredicted RBP19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 CYP3A7P24462 503 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 MAP3K9P80192 1104 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 MTMR2Q13614 643 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 USH1GQ495M9 461 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 KRT26Q7Z3Y9 468 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 ZHX2Q9Y6X8 837 aa19.3■□□□□ 0.68
TMEM39B-203ENST00000441402 ABCB11O95342 1321 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 IQCA1LA6NCM1 817 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 ACTN4O43707 911 aaKnown RBP19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 VCAM1P19320 739 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 STX1AQ16623 288 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 FAM200AQ8TCP9 573 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 CCDC34Q96HJ3 373 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 MBOAT7Q96N66 472 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 ANO3Q9BYT9 981 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 CCSER1Q9C0I3 900 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 ANO10Q9NW15 660 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 AFG3L2Q9Y4W6 797 aa19.29■□□□□ 0.68
TMEM39B-203ENST00000441402 ICAM1P05362 532 aa19.28■□□□□ 0.68
TMEM39B-203ENST00000441402 SLFN14P0C7P3 912 aa19.28■□□□□ 0.68
TMEM39B-203ENST00000441402 SH3D19Q5HYK7 790 aa19.28■□□□□ 0.68
TMEM39B-203ENST00000441402 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.28■□□□□ 0.68
TMEM39B-203ENST00000441402 LDHDQ86WU2 507 aa19.28■□□□□ 0.68
TMEM39B-203ENST00000441402 RNF214Q8ND24 703 aa19.28■□□□□ 0.68
TMEM39B-203ENST00000441402 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
TMEM39B-203ENST00000441402 TAF1DQ9H5J8 278 aaPredicted RBP19.28■□□□□ 0.68
TMEM39B-203ENST00000441402 SERTAD1Q9UHV2 236 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms