RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 TRAF1Q13077 416 aa21.18■□□□□ 0.98
PTX4-202ENST00000440447 SLAIN1Q8ND83 568 aa21.18■□□□□ 0.98
PTX4-202ENST00000440447 PIBF1Q8WXW3 757 aa21.18■□□□□ 0.98
PTX4-202ENST00000440447 DDX11Q96FC9 970 aa21.18■□□□□ 0.98
PTX4-202ENST00000440447 KIF2CQ99661 725 aa21.18■□□□□ 0.98
PTX4-202ENST00000440447 APBA2Q99767 749 aa21.18■□□□□ 0.98
PTX4-202ENST00000440447 SEC63Q9UGP8 760 aaKnown RBP21.18■□□□□ 0.98
PTX4-202ENST00000440447 CDC27P30260 824 aa21.17■□□□□ 0.98
PTX4-202ENST00000440447 GRK4P32298 578 aa21.17■□□□□ 0.98
PTX4-202ENST00000440447 ADD1P35611 737 aaKnown RBP21.17■□□□□ 0.98
PTX4-202ENST00000440447 SLC9C1Q4G0N8 1177 aa21.17■□□□□ 0.98
PTX4-202ENST00000440447 MUM1L1Q5H9M0 696 aa21.17■□□□□ 0.98
PTX4-202ENST00000440447 PXYLP1Q8TE99 480 aa21.17■□□□□ 0.98
PTX4-202ENST00000440447 TBC1D32Q96NH3 1257 aa21.17■□□□□ 0.98
PTX4-202ENST00000440447 FAM217BQ9NTX9 383 aaPredicted RBP21.17■□□□□ 0.98
PTX4-202ENST00000440447 ABCB11O95342 1321 aa21.17■□□□□ 0.98
PTX4-202ENST00000440447 NID2Q14112 1375 aa21.17■□□□□ 0.98
PTX4-202ENST00000440447 PGK2P07205 417 aa21.16■□□□□ 0.98
PTX4-202ENST00000440447 HOXC6P09630 235 aa21.16■□□□□ 0.98
PTX4-202ENST00000440447 CCT2P78371 535 aaKnown RBP21.16■□□□□ 0.98
PTX4-202ENST00000440447 TRMT44Q8IYL2 757 aaKnown RBP21.16■□□□□ 0.98
PTX4-202ENST00000440447 MRPL11Q9Y3B7 192 aaKnown RBP21.16■□□□□ 0.98
PTX4-202ENST00000440447 PFASO15067 1338 aa21.15■□□□□ 0.98
PTX4-202ENST00000440447 COBLO75128 1261 aa21.15■□□□□ 0.98
PTX4-202ENST00000440447 ELNP15502 786 aa21.15■□□□□ 0.98
PTX4-202ENST00000440447 RABEP1Q15276 862 aa21.15■□□□□ 0.98
PTX4-202ENST00000440447 NSMFQ6X4W1 530 aa21.15■□□□□ 0.98
PTX4-202ENST00000440447 A1CFQ9NQ94 594 aaKnown RBP21.15■□□□□ 0.98
PTX4-202ENST00000440447 BIN2Q9UBW5 565 aaPredicted RBP21.15■□□□□ 0.98
PTX4-202ENST00000440447 PCDHA1Q9Y5I3 950 aa21.15■□□□□ 0.98
PTX4-202ENST00000440447 CNTNAP5Q8WYK1 1306 aa21.14■□□□□ 0.97
PTX4-202ENST00000440447 NFIBO00712 420 aa21.14■□□□□ 0.97
PTX4-202ENST00000440447 PPP1R11O60927 126 aaPredicted RBP21.14■□□□□ 0.97
PTX4-202ENST00000440447 STK3Q13188 491 aa21.14■□□□□ 0.97
PTX4-202ENST00000440447 NOL8Q76FK4 1167 aaKnown RBP21.14■□□□□ 0.97
PTX4-202ENST00000440447 NPLOC4Q8TAT6 608 aa21.14■□□□□ 0.97
PTX4-202ENST00000440447 SH3TC2Q8TF17 1288 aa21.14■□□□□ 0.97
PTX4-202ENST00000440447 CLEC4DQ8WXI8 215 aa21.14■□□□□ 0.97
PTX4-202ENST00000440447 TPCN1Q9ULQ1 816 aa21.14■□□□□ 0.97
PTX4-202ENST00000440447 DNAJC25-GNG10A0A024R161 153 aa21.13■□□□□ 0.97
PTX4-202ENST00000440447 POTEB2H3BUK9 544 aa21.13■□□□□ 0.97
PTX4-202ENST00000440447 FUT2Q10981 343 aa21.13■□□□□ 0.97
PTX4-202ENST00000440447 ZNF792Q3KQV3 632 aa21.13■□□□□ 0.97
PTX4-202ENST00000440447 MCF2L2Q86YR7 1114 aa21.13■□□□□ 0.97
PTX4-202ENST00000440447 SLKQ9H2G2 1235 aaPredicted RBP21.13■□□□□ 0.97
PTX4-202ENST00000440447 NCOA5Q9HCD5 579 aaKnown RBP21.13■□□□□ 0.97
PTX4-202ENST00000440447 CYP39A1Q9NYL5 469 aa21.13■□□□□ 0.97
PTX4-202ENST00000440447 DIS3Q9Y2L1 958 aaKnown RBP21.13■□□□□ 0.97
PTX4-202ENST00000440447 hCG_1642624A0A1W2PR95 340 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 PTPDC1A2A3K4 754 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 CPLX1O14810 134 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 HMGCRP04035 888 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 UBXN2AP68543 259 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 BAATQ14032 418 aaPredicted RBP21.12■□□□□ 0.97
PTX4-202ENST00000440447 CCL14Q16627 93 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 CPLX2Q6PUV4 134 aaKnown RBP21.12■□□□□ 0.97
PTX4-202ENST00000440447 RNF207Q6ZRF8 634 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 RGS22Q8NE09 1264 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 IL27Q8NEV9 243 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 TRIB2Q92519 343 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 MAF1Q9H063 256 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 V9GY48 417 aaPredicted RBP21.12■□□□□ 0.97
PTX4-202ENST00000440447 PLXNB2O15031 1838 aa21.12■□□□□ 0.97
PTX4-202ENST00000440447 ZNF236Q9UL36 1845 aa21.11■□□□□ 0.97
PTX4-202ENST00000440447 DOCK3Q8IZD9 2030 aa21.11■□□□□ 0.97
PTX4-202ENST00000440447 PFKFB2O60825 505 aa21.11■□□□□ 0.97
PTX4-202ENST00000440447 AKAP17AQ02040 695 aaKnown RBP21.11■□□□□ 0.97
PTX4-202ENST00000440447 MFSD14CQ5VZR4 134 aa21.11■□□□□ 0.97
PTX4-202ENST00000440447 OLFML2BQ68BL8 750 aa21.11■□□□□ 0.97
PTX4-202ENST00000440447 ARMC5Q96C12 935 aa21.11■□□□□ 0.97
PTX4-202ENST00000440447 ABHD8Q96I13 439 aa21.11■□□□□ 0.97
PTX4-202ENST00000440447 MAML3Q96JK9 1138 aa21.11■□□□□ 0.97
PTX4-202ENST00000440447 ST18O60284 1047 aa21.1■□□□□ 0.97
PTX4-202ENST00000440447 INHAP05111 366 aa21.1■□□□□ 0.97
PTX4-202ENST00000440447 IFNAR1P17181 557 aa21.1■□□□□ 0.97
PTX4-202ENST00000440447 CALML3P27482 149 aa21.1■□□□□ 0.97
PTX4-202ENST00000440447 NTRK3Q16288 839 aa21.1■□□□□ 0.97
PTX4-202ENST00000440447 FAM133AQ8N9E0 248 aa21.1■□□□□ 0.97
PTX4-202ENST00000440447 FLRT1Q9NZU1 646 aa21.1■□□□□ 0.97
PTX4-202ENST00000440447 RBM27Q9P2N5 1060 aaKnown RBP21.1■□□□□ 0.97
PTX4-202ENST00000440447 LIMCH1Q9UPQ0 1083 aa21.1■□□□□ 0.97
PTX4-202ENST00000440447 PRPF3O43395 683 aaKnown RBP21.09■□□□□ 0.97
PTX4-202ENST00000440447 RPS6P62753 249 aaKnown RBP21.09■□□□□ 0.97
PTX4-202ENST00000440447 CNTN2Q02246 1040 aa21.09■□□□□ 0.97
PTX4-202ENST00000440447 SCRN1Q12765 414 aa21.09■□□□□ 0.97
PTX4-202ENST00000440447 ME3Q16798 604 aa21.09■□□□□ 0.97
PTX4-202ENST00000440447 HEATR3Q7Z4Q2 680 aa21.09■□□□□ 0.97
PTX4-202ENST00000440447 PHKBQ93100 1093 aa21.09■□□□□ 0.97
PTX4-202ENST00000440447 ZNF333Q96JL9 665 aa21.09■□□□□ 0.97
PTX4-202ENST00000440447 CFBP00751 764 aa21.08■□□□□ 0.97
PTX4-202ENST00000440447 SLC30A10Q6XR72 485 aa21.08■□□□□ 0.97
PTX4-202ENST00000440447 ZNF467Q7Z7K2 595 aaPredicted RBP21.08■□□□□ 0.97
PTX4-202ENST00000440447 TRIM22Q8IYM9 498 aa21.08■□□□□ 0.97
PTX4-202ENST00000440447 MSL3Q8N5Y2 521 aaKnown RBP21.08■□□□□ 0.97
PTX4-202ENST00000440447 SAMD3Q8N6K7 520 aa21.08■□□□□ 0.97
PTX4-202ENST00000440447 TBC1D5Q92609 795 aa21.08■□□□□ 0.97
PTX4-202ENST00000440447 SLC26A6Q9BXS9 759 aa21.08■□□□□ 0.97
PTX4-202ENST00000440447 RNF26Q9BY78 433 aaPredicted RBP21.08■□□□□ 0.97
PTX4-202ENST00000440447 hCG_1984214I3L0E3 225 aa21.07■□□□□ 0.96
PTX4-202ENST00000440447 CDKL5O76039 1030 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms