RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 SEZ6LQ9BYH1 1024 aa24.55■■□□□ 1.52
TRIM39-210ENST00000440271 TRPV6Q9H1D0 765 aa24.55■■□□□ 1.52
TRIM39-210ENST00000440271 RNF146Q9NTX7 359 aa24.55■■□□□ 1.52
TRIM39-210ENST00000440271 ZNF536O15090 1300 aa24.55■■□□□ 1.52
TRIM39-210ENST00000440271 RNF113AO15541 343 aaKnown RBP24.54■■□□□ 1.52
TRIM39-210ENST00000440271 GPAA1O43292 621 aa24.54■■□□□ 1.52
TRIM39-210ENST00000440271 ZEB2O60315 1214 aa24.54■■□□□ 1.52
TRIM39-210ENST00000440271 APPP05067 770 aa24.54■■□□□ 1.52
TRIM39-210ENST00000440271 SMPD1P17405 629 aa24.54■■□□□ 1.52
TRIM39-210ENST00000440271 GNAT2P19087 354 aa24.54■■□□□ 1.52
TRIM39-210ENST00000440271 PTGS1P23219 599 aa24.54■■□□□ 1.52
TRIM39-210ENST00000440271 IL27Q8NEV9 243 aa24.54■■□□□ 1.52
TRIM39-210ENST00000440271 NEDD1Q8NHV4 660 aa24.54■■□□□ 1.52
TRIM39-210ENST00000440271 CHMP4BQ9H444 224 aaKnown RBP24.54■■□□□ 1.52
TRIM39-210ENST00000440271 ISY1Q9ULR0 285 aaKnown RBP24.54■■□□□ 1.52
TRIM39-210ENST00000440271 B4GALT4O60513 344 aa24.53■■□□□ 1.52
TRIM39-210ENST00000440271 STAT2P52630 851 aa24.53■■□□□ 1.52
TRIM39-210ENST00000440271 RABGGTBP53611 331 aa24.53■■□□□ 1.52
TRIM39-210ENST00000440271 TKFCQ3LXA3 575 aa24.53■■□□□ 1.52
TRIM39-210ENST00000440271 RPUSD2Q8IZ73 545 aaKnown RBP24.53■■□□□ 1.52
TRIM39-210ENST00000440271 CHURC1Q8WUH1 139 aa24.53■■□□□ 1.52
TRIM39-210ENST00000440271 STAG1Q8WVM7 1258 aa24.53■■□□□ 1.52
TRIM39-210ENST00000440271 TRERF1Q96PN7 1200 aa24.53■■□□□ 1.52
TRIM39-210ENST00000440271 WNT8AQ9H1J5 351 aa24.53■■□□□ 1.52
TRIM39-210ENST00000440271 PDGFCQ9NRA1 345 aa24.53■■□□□ 1.52
TRIM39-210ENST00000440271 SLC4A7Q9Y6M7 1214 aa24.53■■□□□ 1.52
TRIM39-210ENST00000440271 DDX49Q9Y6V7 483 aaKnown RBP24.53■■□□□ 1.52
TRIM39-210ENST00000440271 NCOR1O75376 2440 aa24.52■■□□□ 1.52
TRIM39-210ENST00000440271 PATL2C9JE40 543 aaKnown RBP24.52■■□□□ 1.52
TRIM39-210ENST00000440271 TSPY3P0CV98 308 aa24.52■■□□□ 1.52
TRIM39-210ENST00000440271 TSPY8P0CW00 308 aa24.52■■□□□ 1.52
TRIM39-210ENST00000440271 PSMC6P62333 389 aa24.52■■□□□ 1.52
TRIM39-210ENST00000440271 IQSEC1Q6DN90 963 aa24.52■■□□□ 1.52
TRIM39-210ENST00000440271 FAM160B2Q86V87 743 aa24.52■■□□□ 1.52
TRIM39-210ENST00000440271 IFNL3Q8IZI9 196 aa24.52■■□□□ 1.52
TRIM39-210ENST00000440271 TSPYL2Q9H2G4 693 aaPredicted RBP24.52■■□□□ 1.52
TRIM39-210ENST00000440271 Q9Y3F1 56 aa24.52■■□□□ 1.52
TRIM39-210ENST00000440271 M0R2C6 588 aa24.51■■□□□ 1.51
TRIM39-210ENST00000440271 ZFYP08048 801 aaPredicted RBP24.51■■□□□ 1.51
TRIM39-210ENST00000440271 ALAS1P13196 640 aa24.51■■□□□ 1.51
TRIM39-210ENST00000440271 MYOGP15173 224 aa24.51■■□□□ 1.51
TRIM39-210ENST00000440271 IKQ13123 557 aaPredicted RBP24.51■■□□□ 1.51
TRIM39-210ENST00000440271 TAPT1Q6NXT6 567 aa24.51■■□□□ 1.51
TRIM39-210ENST00000440271 EEPD1Q7L9B9 569 aa24.51■■□□□ 1.51
TRIM39-210ENST00000440271 CHMP4CQ96CF2 233 aa24.51■■□□□ 1.51
TRIM39-210ENST00000440271 GMCL1Q96IK5 515 aa24.51■■□□□ 1.51
TRIM39-210ENST00000440271 PCDHA11Q9Y5I1 949 aa24.51■■□□□ 1.51
TRIM39-210ENST00000440271 CHD7Q9P2D1 2997 aa24.51■■□□□ 1.51
TRIM39-210ENST00000440271 MCCP23508 829 aa24.5■■□□□ 1.51
TRIM39-210ENST00000440271 SLC1A4P43007 532 aa24.5■■□□□ 1.51
TRIM39-210ENST00000440271 TFAP4Q01664 338 aa24.5■■□□□ 1.51
TRIM39-210ENST00000440271 TMEM63BQ5T3F8 832 aa24.5■■□□□ 1.51
TRIM39-210ENST00000440271 PPP2R2DQ66LE6 453 aa24.5■■□□□ 1.51
TRIM39-210ENST00000440271 VWCEQ96DN2 955 aa24.5■■□□□ 1.51
TRIM39-210ENST00000440271 BDP1A6H8Y1 2624 aa24.5■■□□□ 1.51
TRIM39-210ENST00000440271 PLIN4Q96Q06 1357 aa24.5■■□□□ 1.51
TRIM39-210ENST00000440271 PDE4BQ07343 736 aa24.49■■□□□ 1.51
TRIM39-210ENST00000440271 FBXO16Q8IX29 292 aaPredicted RBP24.49■■□□□ 1.51
TRIM39-210ENST00000440271 SCLYQ96I15 445 aa24.49■■□□□ 1.51
TRIM39-210ENST00000440271 CYP39A1Q9NYL5 469 aa24.49■■□□□ 1.51
TRIM39-210ENST00000440271 GBF1Q92538 1859 aa24.49■■□□□ 1.51
TRIM39-210ENST00000440271 ZBBXA8MT70 800 aa24.48■■□□□ 1.51
TRIM39-210ENST00000440271 PLA2G6O60733 806 aa24.48■■□□□ 1.51
TRIM39-210ENST00000440271 BMP1P13497 986 aa24.48■■□□□ 1.51
TRIM39-210ENST00000440271 SNAP25P60880 206 aa24.48■■□□□ 1.51
TRIM39-210ENST00000440271 MUM1L1Q5H9M0 696 aa24.48■■□□□ 1.51
TRIM39-210ENST00000440271 MICALL1Q8N3F8 863 aa24.48■■□□□ 1.51
TRIM39-210ENST00000440271 ALDH8A1Q9H2A2 487 aaPredicted RBP24.48■■□□□ 1.51
TRIM39-210ENST00000440271 ATP2A2P16615 1042 aaKnown RBP24.47■■□□□ 1.51
TRIM39-210ENST00000440271 TSHZ3Q63HK5 1081 aa24.47■■□□□ 1.51
TRIM39-210ENST00000440271 GPATCH3Q96I76 525 aa24.47■■□□□ 1.51
TRIM39-210ENST00000440271 NECAB3Q96P71 396 aaPredicted RBP24.47■■□□□ 1.51
TRIM39-210ENST00000440271 NACAP1Q9BZK3 213 aa24.47■■□□□ 1.51
TRIM39-210ENST00000440271 SLC3A2P08195 630 aaKnown RBP24.46■■□□□ 1.51
TRIM39-210ENST00000440271 RCSD1Q6JBY9 416 aa24.46■■□□□ 1.51
TRIM39-210ENST00000440271 KIAA1211Q6ZU35 1233 aa24.46■■□□□ 1.51
TRIM39-210ENST00000440271 KCTD1Q719H9 257 aa24.46■■□□□ 1.51
TRIM39-210ENST00000440271 PURBQ96QR8 312 aaKnown RBP24.46■■□□□ 1.51
TRIM39-210ENST00000440271 VTA1Q9NP79 307 aa24.46■■□□□ 1.51
TRIM39-210ENST00000440271 PRR12Q9ULL5 1215 aa24.46■■□□□ 1.51
TRIM39-210ENST00000440271 TFF2Q03403 129 aa24.45■■□□□ 1.5
TRIM39-210ENST00000440271 PPARAQ07869 468 aa24.45■■□□□ 1.5
TRIM39-210ENST00000440271 TTLL4Q14679 1199 aa24.45■■□□□ 1.5
TRIM39-210ENST00000440271 NSMFQ6X4W1 530 aa24.45■■□□□ 1.5
TRIM39-210ENST00000440271 MORC4Q8TE76 937 aa24.45■■□□□ 1.5
TRIM39-210ENST00000440271 SEC62Q99442 399 aaKnown RBP24.45■■□□□ 1.5
TRIM39-210ENST00000440271 TRMT13Q9NUP7 481 aaKnown RBP24.45■■□□□ 1.5
TRIM39-210ENST00000440271 PFKMP08237 780 aa24.44■■□□□ 1.5
TRIM39-210ENST00000440271 SUPT20HL2P0C7V6 817 aa24.44■■□□□ 1.5
TRIM39-210ENST00000440271 CYP2C9P11712 490 aa24.44■■□□□ 1.5
TRIM39-210ENST00000440271 AAK1Q2M2I8 961 aa24.44■■□□□ 1.5
TRIM39-210ENST00000440271 DUSP28Q4G0W2 176 aa24.44■■□□□ 1.5
TRIM39-210ENST00000440271 PPP4R3BQ5MIZ7 849 aa24.44■■□□□ 1.5
TRIM39-210ENST00000440271 STX8Q9UNK0 236 aa24.44■■□□□ 1.5
TRIM39-210ENST00000440271 RFXAPO00287 272 aa24.43■■□□□ 1.5
TRIM39-210ENST00000440271 PLA2G5P39877 138 aa24.43■■□□□ 1.5
TRIM39-210ENST00000440271 LRRFIP1Q32MZ4 808 aaKnown RBP24.43■■□□□ 1.5
TRIM39-210ENST00000440271 TMEM67Q5HYA8 995 aa24.43■■□□□ 1.5
TRIM39-210ENST00000440271 DEFB128Q7Z7B8 93 aa24.43■■□□□ 1.5
TRIM39-210ENST00000440271 NAPBQ9H115 298 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms