RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 RANBP17Q9H2T7 1088 aaKnown RBP22.39■■□□□ 1.17
APTR-204ENST00000440088 SCN4AP35499 1836 aa22.39■■□□□ 1.17
APTR-204ENST00000440088 BACE1P56817 501 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 LETM2Q2VYF4 491 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 SPECC1Q5M775 1068 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 KCNH3Q9ULD8 1083 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 LAD1O00515 517 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 CCNT1O60563 726 aaKnown RBP22.38■■□□□ 1.17
APTR-204ENST00000440088 USP2O75604 605 aaPredicted RBP22.38■■□□□ 1.17
APTR-204ENST00000440088 CCDC192P0DO97 292 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 ORC2Q13416 577 aaPredicted RBP22.38■■□□□ 1.17
APTR-204ENST00000440088 PRKG1Q13976 671 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 C4orf32Q8N8J7 132 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 TIGD1Q96MW7 591 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 FUCA2Q9BTY2 467 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 FBXO28Q9NVF7 368 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 ZHX2Q9Y6X8 837 aa22.38■■□□□ 1.17
APTR-204ENST00000440088 PPP1R12BO60237 982 aaPredicted RBP22.37■■□□□ 1.17
APTR-204ENST00000440088 EMILIN3Q9NT22 766 aa22.37■■□□□ 1.17
APTR-204ENST00000440088 VWA3AA6NCI4 1184 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 VCAM1P19320 739 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 MCTP2Q6DN12 878 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 PRPF38AQ8NAV1 312 aaKnown RBP22.36■■□□□ 1.17
APTR-204ENST00000440088 USP17L15C9J2P7 530 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 USP17L13C9JLJ4 530 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 USP17L11C9JVI0 530 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 USP17L18D6R9N7 530 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 USP17L22D6RA61 530 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 USP17L17D6RBQ6 530 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 USP17L19D6RCP7 530 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 USP17L20D6RJB6 530 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 USP17L24Q0WX57 530 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 USP17L6PQ6QN14 398 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 SAMD1Q6SPF0 538 aaPredicted RBP22.36■■□□□ 1.17
APTR-204ENST00000440088 DLK2Q6UY11 383 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 SLF1Q9BQI6 1058 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 RBSNQ9H1K0 784 aa22.36■■□□□ 1.17
APTR-204ENST00000440088 TAF1DQ9H5J8 278 aaPredicted RBP22.36■■□□□ 1.17
APTR-204ENST00000440088 CCDC174Q6PII3 467 aa22.35■■□□□ 1.17
APTR-204ENST00000440088 TEX2Q8IWB9 1127 aa22.35■■□□□ 1.17
APTR-204ENST00000440088 TANGO6Q9C0B7 1094 aa22.35■■□□□ 1.17
APTR-204ENST00000440088 C19orf81C9J6K1 198 aa22.35■■□□□ 1.17
APTR-204ENST00000440088 MEIS2O14770 477 aa22.35■■□□□ 1.17
APTR-204ENST00000440088 NEMFO60524 1076 aa22.35■■□□□ 1.17
APTR-204ENST00000440088 XRCC6P12956 609 aaKnown RBP eCLIP22.35■■□□□ 1.17
APTR-204ENST00000440088 MAP3K9P80192 1104 aa22.35■■□□□ 1.17
APTR-204ENST00000440088 AP3B2Q13367 1082 aa22.35■■□□□ 1.17
APTR-204ENST00000440088 DGKZQ13574 1117 aa22.35■■□□□ 1.17
APTR-204ENST00000440088 SASS6Q6UVJ0 657 aa22.35■■□□□ 1.17
APTR-204ENST00000440088 PHIPQ8WWQ0 1821 aa22.34■■□□□ 1.17
APTR-204ENST00000440088 NF2P35240 595 aa22.34■■□□□ 1.17
APTR-204ENST00000440088 PRPHP41219 470 aa22.34■■□□□ 1.17
APTR-204ENST00000440088 EAPPQ56P03 285 aaPredicted RBP22.34■■□□□ 1.17
APTR-204ENST00000440088 PNMA8AQ86V59 439 aaPredicted RBP22.34■■□□□ 1.17
APTR-204ENST00000440088 TMEM60Q9H2L4 133 aa22.34■■□□□ 1.17
APTR-204ENST00000440088 LONP1P36776 959 aaKnown RBP22.33■■□□□ 1.17
APTR-204ENST00000440088 TYRO3Q06418 890 aa22.33■■□□□ 1.17
APTR-204ENST00000440088 DTHD1Q6ZMT9 781 aa22.33■■□□□ 1.17
APTR-204ENST00000440088 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.33■■□□□ 1.17
APTR-204ENST00000440088 SYMPKQ92797 1274 aaKnown RBP22.33■■□□□ 1.17
APTR-204ENST00000440088 RPAP3Q9H6T3 665 aaPredicted RBP22.33■■□□□ 1.17
APTR-204ENST00000440088 FLOT1O75955 427 aa22.33■■□□□ 1.16
APTR-204ENST00000440088 IREB2P48200 963 aaKnown RBP22.33■■□□□ 1.16
APTR-204ENST00000440088 VGLL4Q14135 290 aa22.33■■□□□ 1.16
APTR-204ENST00000440088 IL17AQ16552 155 aa22.33■■□□□ 1.16
APTR-204ENST00000440088 USP49Q70CQ1 688 aa22.33■■□□□ 1.16
APTR-204ENST00000440088 EPSTI1Q96J88 318 aa22.33■■□□□ 1.16
APTR-204ENST00000440088 C12orf42Q96LP6 360 aa22.33■■□□□ 1.16
APTR-204ENST00000440088 CSADQ9Y600 493 aa22.33■■□□□ 1.16
APTR-204ENST00000440088 OPLAHO14841 1288 aa22.32■■□□□ 1.16
APTR-204ENST00000440088 POLR2DO15514 142 aaKnown RBP22.32■■□□□ 1.16
APTR-204ENST00000440088 FOSP01100 380 aaPredicted RBP22.32■■□□□ 1.16
APTR-204ENST00000440088 OR52Z1P0C646 297 aa22.32■■□□□ 1.16
APTR-204ENST00000440088 HMGCS2P54868 508 aa22.32■■□□□ 1.16
APTR-204ENST00000440088 PPP4R3AQ6IN85 833 aa22.32■■□□□ 1.16
APTR-204ENST00000440088 CDCA5Q96FF9 252 aa22.32■■□□□ 1.16
APTR-204ENST00000440088 ANO3Q9BYT9 981 aa22.32■■□□□ 1.16
APTR-204ENST00000440088 MRPL11Q9Y3B7 192 aaKnown RBP22.32■■□□□ 1.16
APTR-204ENST00000440088 SMCHD1A6NHR9 2005 aa22.32■■□□□ 1.16
APTR-204ENST00000440088 WDR90Q96KV7 1748 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 POTECB2RU33 542 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 PIK3CDO00329 1044 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 TAL1P17542 331 aaPredicted RBP22.31■■□□□ 1.16
APTR-204ENST00000440088 LONRF3Q496Y0 759 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 KRBA2Q6ZNG9 492 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 LDHDQ86WU2 507 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 CNNM3Q8NE01 707 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 NAP1L4Q99733 375 aaKnown RBP22.31■■□□□ 1.16
APTR-204ENST00000440088 AFG3L2Q9Y4W6 797 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 SNCAIPQ9Y6H5 919 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 MYH7BA7E2Y1 1941 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 ABCB11O95342 1321 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 SPDYE3A6NKU9 549 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 ICAM1P05362 532 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 RNF214Q8ND24 703 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 PPP1R9AQ9ULJ8 1098 aa22.31■■□□□ 1.16
APTR-204ENST00000440088 GCFC2P16383 781 aaKnown RBP22.3■■□□□ 1.16
APTR-204ENST00000440088 ELOA2Q8IYF1 753 aaPredicted RBP22.3■■□□□ 1.16
APTR-204ENST00000440088 PDILTQ8N807 584 aa22.3■■□□□ 1.16
APTR-204ENST00000440088 RBM46Q8TBY0 533 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms