RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 UBAC1Q9BSL1 405 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 TMEM106CQ9BVX2 250 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 EHD4Q9H223 541 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 VCPKMTQ9H867 229 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 GOPCQ9HD26 462 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 ZSWIM5Q9P217 1185 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 STK36Q9NRP7 1315 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 C19orf81C9J6K1 198 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 H3BQV1 296 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 GTF2F1P35269 517 aaKnown RBP eCLIP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 ATN1P54259 1190 aaPredicted RBP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 USP14P54578 494 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 IRX5P78411 483 aaPredicted RBP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 PABPC4Q13310 644 aaKnown RBP eCLIP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 TMEM132BQ14DG7 1078 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 PPP2R5BQ15173 497 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 FBXO46Q6PJ61 603 aaPredicted RBP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 CATSPERGQ6ZRH7 1159 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 GPR142Q7Z601 462 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 CERS3Q8IU89 383 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 NCOA7Q8NI08 942 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 TMEM87BQ96K49 555 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 UNC93B1Q9H1C4 597 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 TNMDQ9H2S6 317 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 ZNF287Q9HBT7 754 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 KCND1Q9NSA2 647 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 RTEL1Q9NZ71 1219 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 SRRDQ9UH36 339 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 LAMB1P07942 1786 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 TESPA1A2RU30 521 aaPredicted RBP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 IFIT3O14879 490 aaKnown RBP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 NPM3O75607 178 aaKnown RBP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 TFRCP02786 760 aaKnown RBP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 TUBB4AP04350 444 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 INHAP05111 366 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 BCRP11274 1271 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 SCRN1Q12765 414 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 CYB5R4Q7L1T6 521 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 NBPF11Q86T75 865 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 ANKRD35Q8N283 1001 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 PROCA1Q8NCQ7 364 aaPredicted RBP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 KCNG4Q8TDN1 519 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 BRF1Q92994 677 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 DDX11Q96FC9 970 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 CCDC17Q96LX7 622 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 TIGD1Q96MW7 591 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 NAP1L5Q96NT1 182 aaPredicted RBP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 TMEM47Q9BQJ4 181 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 WDR18Q9BV38 432 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 MOV10L1Q9BXT6 1211 aaKnown RBP5.45□□□□□ -1.54
EDEM3-203ENST00000439962 KIAA1683Q9H0B3 1180 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 POLR3EQ9NVU0 708 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 TMX2Q9Y320 296 aa5.45□□□□□ -1.54
EDEM3-203ENST00000439962 SMCHD1A6NHR9 2005 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 FAM237AA0A1B0GTK4 181 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 PTPDC1A2A3K4 754 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 ADCY5O95622 1261 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 PTMAP06454 111 aaKnown RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 PCP11498 1178 aaKnown RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 BMP3P12645 472 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 ADORA2AP29274 412 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 UBXN2AP68543 259 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 TYRO3Q06418 890 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 FAM110CQ1W6H9 321 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 IFIT1BQ5T764 474 aaKnown RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 IQCA1Q86XH1 822 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 MB21D2Q8IYB1 491 aaPredicted RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 ESR2Q92731 530 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 DPF3Q92784 378 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 FERMT2Q96AC1 680 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 NAT10Q9H0A0 1025 aaKnown RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 SPATC1LQ9H0A9 340 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 KAT14Q9H8E8 782 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 CNNM2Q9H8M5 875 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 TNKSO95271 1327 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 CHD7Q9P2D1 2997 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 NAV1Q8NEY1 1877 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 PRKAR2AP13861 404 aaKnown RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 CALML3P27482 149 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 PDIA3P30101 505 aaKnown RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 ADD1P35611 737 aaKnown RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 STAT3P40763 770 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 KCNJ6P48051 423 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 STAT2P52630 851 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 FAM160A1Q05DH4 1040 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 SYCP1Q15431 976 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 STX1AQ16623 288 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 ADALQ6DHV7 355 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 CPLX2Q6PUV4 134 aaKnown RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 STOX1Q6ZVD7 989 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 TRMT1LQ7Z2T5 733 aaKnown RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 MICU3Q86XE3 530 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 REM2Q8IYK8 340 aaPredicted RBP5.44□□□□□ -1.54
EDEM3-203ENST00000439962 STAG2Q8N3U4 1231 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 NECAB1Q8N987 351 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 TRIB2Q92519 343 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 WASF1Q92558 559 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 MRFAP1L1Q96HT8 127 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 NUDT12Q9BQG2 462 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 HOXC10Q9NYD6 342 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms