RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 USP17L17D6RBQ6 530 aa8.8□□□□□ -1
COPS3-203ENST00000439936 USP17L19D6RCP7 530 aa8.8□□□□□ -1
COPS3-203ENST00000439936 USP17L20D6RJB6 530 aa8.8□□□□□ -1
COPS3-203ENST00000439936 E7EWF7 191 aa8.8□□□□□ -1
COPS3-203ENST00000439936 F5H6K3 240 aa8.8□□□□□ -1
COPS3-203ENST00000439936 WNT7AO00755 349 aa8.8□□□□□ -1
COPS3-203ENST00000439936 SLC27A2O14975 620 aa8.8□□□□□ -1
COPS3-203ENST00000439936 FKTNO75072 461 aa8.8□□□□□ -1
COPS3-203ENST00000439936 TTLL1O95922 423 aa8.8□□□□□ -1
COPS3-203ENST00000439936 JUNDP17535 347 aa8.8□□□□□ -1
COPS3-203ENST00000439936 NOVP48745 357 aa8.8□□□□□ -1
COPS3-203ENST00000439936 SP3Q02447 781 aa8.8□□□□□ -1
COPS3-203ENST00000439936 KLRC3Q07444 240 aa8.8□□□□□ -1
COPS3-203ENST00000439936 USP17L24Q0WX57 530 aa8.8□□□□□ -1
COPS3-203ENST00000439936 PABPC4Q13310 644 aaKnown RBP eCLIP8.8□□□□□ -14e-7■■■□□ 17.3
COPS3-203ENST00000439936 PTCRAQ6ISU1 281 aaPredicted RBP8.8□□□□□ -1
COPS3-203ENST00000439936 SPICE1Q8N0Z3 855 aa8.8□□□□□ -1
COPS3-203ENST00000439936 UBE2Q2Q8WVN8 375 aa8.8□□□□□ -1
COPS3-203ENST00000439936 ESR2Q92731 530 aa8.8□□□□□ -1
COPS3-203ENST00000439936 KIFC2Q96AC6 838 aa8.8□□□□□ -1
COPS3-203ENST00000439936 TTC14Q96N46 770 aa8.8□□□□□ -1
COPS3-203ENST00000439936 ZKSCAN3Q9BRR0 538 aa8.8□□□□□ -1
COPS3-203ENST00000439936 KRT23Q9C075 422 aa8.8□□□□□ -1
COPS3-203ENST00000439936 SH2D4AQ9H788 454 aa8.8□□□□□ -1
COPS3-203ENST00000439936 LOC285556D6RIA3 1793 aa8.8□□□□□ -1
COPS3-203ENST00000439936 DOCK3Q8IZD9 2030 aa8.8□□□□□ -1
COPS3-203ENST00000439936 NEDD4P46934 1319 aa8.8□□□□□ -1
COPS3-203ENST00000439936 LAMA4Q16363 1823 aa8.8□□□□□ -1
COPS3-203ENST00000439936 TERTO14746 1132 aaKnown RBP8.79□□□□□ -1
COPS3-203ENST00000439936 RAD21O60216 631 aa8.79□□□□□ -1
COPS3-203ENST00000439936 BCRP11274 1271 aa8.79□□□□□ -1
COPS3-203ENST00000439936 VCAM1P19320 739 aa8.79□□□□□ -1
COPS3-203ENST00000439936 IRX3P78415 501 aaPredicted RBP8.79□□□□□ -1
COPS3-203ENST00000439936 COG2Q14746 738 aa8.79□□□□□ -1
COPS3-203ENST00000439936 COL13A1Q5TAT6 717 aaPredicted RBP8.79□□□□□ -1
COPS3-203ENST00000439936 CREB3L3Q68CJ9 461 aa8.79□□□□□ -1
COPS3-203ENST00000439936 RCSD1Q6JBY9 416 aa8.79□□□□□ -1
COPS3-203ENST00000439936 STOX1Q6ZVD7 989 aa8.79□□□□□ -1
COPS3-203ENST00000439936 CYB5R4Q7L1T6 521 aa8.79□□□□□ -1
COPS3-203ENST00000439936 LPAR1Q92633 364 aa8.79□□□□□ -1
COPS3-203ENST00000439936 PARK7Q99497 189 aaKnown RBP8.79□□□□□ -1
COPS3-203ENST00000439936 RPAP3Q9H6T3 665 aaPredicted RBP8.79□□□□□ -1
COPS3-203ENST00000439936 CNNM2Q9H8M5 875 aa8.79□□□□□ -1
COPS3-203ENST00000439936 ATP13A2Q9NQ11 1180 aa8.79□□□□□ -1
COPS3-203ENST00000439936 HOXC10Q9NYD6 342 aa8.79□□□□□ -1
COPS3-203ENST00000439936 RBPJLQ9UBG7 517 aa8.79□□□□□ -1
COPS3-203ENST00000439936 ADGRA2Q96PE1 1338 aa8.79□□□□□ -1
COPS3-203ENST00000439936 PLIN4Q96Q06 1357 aa8.79□□□□□ -1
COPS3-203ENST00000439936 RLFQ13129 1914 aa8.78□□□□□ -1
COPS3-203ENST00000439936 PEX10O60683 326 aa8.78□□□□□ -1
COPS3-203ENST00000439936 GCLCP48506 637 aaPredicted RBP8.78□□□□□ -1
COPS3-203ENST00000439936 HERVK_113P62684 666 aa8.78□□□□□ -1
COPS3-203ENST00000439936 CAP1Q01518 475 aa8.78□□□□□ -1
COPS3-203ENST00000439936 TRDNQ13061 729 aa8.78□□□□□ -1
COPS3-203ENST00000439936 TMEM259Q4ZIN3 620 aa8.78□□□□□ -1
COPS3-203ENST00000439936 DGKHQ86XP1 1220 aa8.78□□□□□ -1
COPS3-203ENST00000439936 LRRC47Q8N1G4 583 aaKnown RBP8.78□□□□□ -1
COPS3-203ENST00000439936 NCOA7Q8NI08 942 aa8.78□□□□□ -1
COPS3-203ENST00000439936 SMCR8Q8TEV9 937 aaPredicted RBP8.78□□□□□ -1
COPS3-203ENST00000439936 ANKS1AQ92625 1134 aa8.78□□□□□ -1
COPS3-203ENST00000439936 CHMP4CQ96CF2 233 aa8.78□□□□□ -1
COPS3-203ENST00000439936 MRGPRX2Q96LB1 330 aa8.78□□□□□ -1
COPS3-203ENST00000439936 TRIM47Q96LD4 638 aa8.78□□□□□ -1
COPS3-203ENST00000439936 TMEM47Q9BQJ4 181 aa8.78□□□□□ -1
COPS3-203ENST00000439936 STX8Q9UNK0 236 aa8.78□□□□□ -1
COPS3-203ENST00000439936 WDR46O15213 610 aaKnown RBP8.77□□□□□ -1.01
COPS3-203ENST00000439936 NDUFB10O96000 172 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 TOP1P11387 765 aaKnown RBP8.77□□□□□ -1.01
COPS3-203ENST00000439936 SMPD1P17405 629 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 MCCP23508 829 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 NT5C2P49902 561 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 COL9A3Q14050 684 aaPredicted RBP8.77□□□□□ -1.01
COPS3-203ENST00000439936 SEC23AQ15436 765 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 TSGA10IPQ3SY00 556 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 CCDC178Q5BJE1 867 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 FAM83BQ5T0W9 1011 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 SLFN13Q68D06 897 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 CHST3Q7LGC8 479 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 IQCA1Q86XH1 822 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 ANKRD13CQ8N6S4 541 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 GMCL1P1Q8NEA9 526 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 CD99L2Q8TCZ2 262 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 ZSCAN10Q96SZ4 725 aaPredicted RBP8.77□□□□□ -1.01
COPS3-203ENST00000439936 NUP88Q99567 741 aaPredicted RBP8.77□□□□□ -1.01
COPS3-203ENST00000439936 USP26Q9BXU7 913 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 TXNRD2Q9NNW7 524 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 FBXO28Q9NVF7 368 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 SYNPO2Q9UMS6 1093 aa8.77□□□□□ -1.01
COPS3-203ENST00000439936 MGAMO43451 1857 aa8.76□□□□□ -1.01
COPS3-203ENST00000439936 J3QL48 77 aa8.76□□□□□ -1.01
COPS3-203ENST00000439936 CNMDO75829 334 aa8.76□□□□□ -1.01
COPS3-203ENST00000439936 AP1G2O75843 785 aa8.76□□□□□ -1.01
COPS3-203ENST00000439936 FLOT1O75955 427 aa8.76□□□□□ -1.01
COPS3-203ENST00000439936 REC8O95072 547 aa8.76□□□□□ -1.01
COPS3-203ENST00000439936 BMP3P12645 472 aa8.76□□□□□ -1.01
COPS3-203ENST00000439936 CTGFP29279 349 aa8.76□□□□□ -1.01
COPS3-203ENST00000439936 PSMC4P43686 418 aa8.76□□□□□ -1.01
COPS3-203ENST00000439936 LACTBP83111 547 aaPredicted RBP8.76□□□□□ -1.01
COPS3-203ENST00000439936 RNF20Q5VTR2 975 aa8.76□□□□□ -1.01
COPS3-203ENST00000439936 DESI1Q6ICB0 168 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms