RNA–Protein interactions for RNA: ENST00000439478.5

NECAB3-203, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-203ENST00000439478 CABYRO75952 493 aa16.92■□□□□ 0.3
NECAB3-203ENST00000439478 HSPD1P10809 573 aaKnown RBP16.92■□□□□ 0.3
NECAB3-203ENST00000439478 PCP11498 1178 aaKnown RBP16.92■□□□□ 0.3
NECAB3-203ENST00000439478 NOVP48745 357 aa16.92■□□□□ 0.3
NECAB3-203ENST00000439478 PPIGQ13427 754 aaKnown RBP eCLIP16.92■□□□□ 0.31e-9■■■■□ 20.5
NECAB3-203ENST00000439478 SYDE2Q5VT97 1194 aa16.92■□□□□ 0.3
NECAB3-203ENST00000439478 TMEM199Q8N511 208 aa16.92■□□□□ 0.3
NECAB3-203ENST00000439478 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
NECAB3-203ENST00000439478 KATNBL1Q9H079 304 aa16.92■□□□□ 0.3
NECAB3-203ENST00000439478 RANBP17Q9H2T7 1088 aaKnown RBP16.92■□□□□ 0.3
NECAB3-203ENST00000439478 RWDD1Q9H446 243 aaPredicted RBP16.92■□□□□ 0.3
NECAB3-203ENST00000439478 RNF41Q9H4P4 317 aaPredicted RBP16.92■□□□□ 0.3
NECAB3-203ENST00000439478 TCP11L1Q9NUJ3 509 aa16.92■□□□□ 0.3
NECAB3-203ENST00000439478 ADD3Q9UEY8 706 aaKnown RBP16.92■□□□□ 0.3
NECAB3-203ENST00000439478 TBX21Q9UL17 535 aa16.92■□□□□ 0.3
NECAB3-203ENST00000439478 CCDC171Q6TFL3 1326 aa16.92■□□□□ 0.3
NECAB3-203ENST00000439478 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.91■□□□□ 0.3
NECAB3-203ENST00000439478 CDK7P50613 346 aa16.91■□□□□ 0.3
NECAB3-203ENST00000439478 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
NECAB3-203ENST00000439478 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
NECAB3-203ENST00000439478 MUM1L1Q5H9M0 696 aa16.91■□□□□ 0.3
NECAB3-203ENST00000439478 IQSEC1Q6DN90 963 aa16.91■□□□□ 0.3
NECAB3-203ENST00000439478 MFSD5Q6N075 450 aa16.91■□□□□ 0.3
NECAB3-203ENST00000439478 MFSD6Q6ZSS7 791 aa16.91■□□□□ 0.3
NECAB3-203ENST00000439478 RASGRP2Q7LDG7 609 aa16.91■□□□□ 0.3
NECAB3-203ENST00000439478 CDX2Q99626 313 aaPredicted RBP16.91■□□□□ 0.3
NECAB3-203ENST00000439478 TMEM47Q9BQJ4 181 aa16.91■□□□□ 0.3
NECAB3-203ENST00000439478 SEMA6BQ9H3T3 888 aa16.91■□□□□ 0.3
NECAB3-203ENST00000439478 VTA1Q9NP79 307 aa16.91■□□□□ 0.3
NECAB3-203ENST00000439478 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.9■□□□□ 0.3
NECAB3-203ENST00000439478 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.9■□□□□ 0.3
NECAB3-203ENST00000439478 SLC16A2P36021 539 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 EPHB4P54760 987 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 HAND2P61296 217 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 NKX3-2P78367 333 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 BEX3Q00994 111 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 FSCN1Q16658 493 aaKnown RBP16.9■□□□□ 0.3
NECAB3-203ENST00000439478 BTNL9Q6UXG8 535 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 EEPD1Q7L9B9 569 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
NECAB3-203ENST00000439478 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
NECAB3-203ENST00000439478 TTC14Q96N46 770 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 MPHOSPH6Q99547 160 aaKnown RBP16.9■□□□□ 0.3
NECAB3-203ENST00000439478 SEZ6LQ9BYH1 1024 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 GPCPD1Q9NPB8 672 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 Q9Y3F1 56 aa16.9■□□□□ 0.3
NECAB3-203ENST00000439478 FRMPD2Q68DX3 1309 aaPredicted RBP16.9■□□□□ 0.3
NECAB3-203ENST00000439478 LOC102724159A0A0B4J2E5 919 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 PTPDC1A2A3K4 754 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 DYNC1LI2O43237 492 aaPredicted RBP16.89■□□□□ 0.29
NECAB3-203ENST00000439478 PWP2Q15269 919 aaKnown RBP16.89■□□□□ 0.29
NECAB3-203ENST00000439478 AKNAD1Q5T1N1 836 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 TTBK2Q6IQ55 1244 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 B4GALNT3Q6L9W6 998 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 CXCL17Q6UXB2 119 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 KIAA1211Q6ZU35 1233 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 ZNF589Q86UQ0 364 aaPredicted RBP16.89■□□□□ 0.29
NECAB3-203ENST00000439478 FAM126BQ8IXS8 530 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 ESR2Q92731 530 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 GNEQ9Y223 722 aaKnown RBP16.89■□□□□ 0.29
NECAB3-203ENST00000439478 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
NECAB3-203ENST00000439478 CTAGE5O15320 804 aa16.88■□□□□ 0.29
NECAB3-203ENST00000439478 PDHBP11177 359 aa16.88■□□□□ 0.29
NECAB3-203ENST00000439478 FOSL2P15408 326 aa16.88■□□□□ 0.29
NECAB3-203ENST00000439478 SMPD1P17405 629 aa16.88■□□□□ 0.29
NECAB3-203ENST00000439478 NT5C2P49902 561 aa16.88■□□□□ 0.29
NECAB3-203ENST00000439478 BAATQ14032 418 aaPredicted RBP16.88■□□□□ 0.29
NECAB3-203ENST00000439478 PSRC1Q6PGN9 363 aaPredicted RBP16.88■□□□□ 0.29
NECAB3-203ENST00000439478 MTIF3Q9H2K0 278 aaKnown RBP16.88■□□□□ 0.29
NECAB3-203ENST00000439478 ZNF213O14771 459 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 CSF2RAP15509 400 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 DNAJB2P25686 324 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 ALDH5A1P51649 535 aaPredicted RBP16.87■□□□□ 0.29
NECAB3-203ENST00000439478 ITGA7Q13683 1181 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 TAPT1Q6NXT6 567 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 SMC5Q8IY18 1101 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 MAFAQ8NHW3 353 aaPredicted RBP16.87■□□□□ 0.29
NECAB3-203ENST00000439478 MYLIPQ8WY64 445 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.87■□□□□ 0.297e-7■■□□□ 11.6
NECAB3-203ENST00000439478 TTYH1Q9H313 450 aaPredicted RBP16.87■□□□□ 0.29
NECAB3-203ENST00000439478 PDGFCQ9NRA1 345 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 DIAPH3Q9NSV4 1193 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 ASTN1O14525 1302 aa16.87■□□□□ 0.29
NECAB3-203ENST00000439478 DNAH12Q6ZR08 3092 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 B4DLN1 442 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 HIP1O00291 1037 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 NFIBO00712 420 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 SDSP20132 328 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 CALML3P27482 149 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 MRPL12P52815 198 aaKnown RBP16.86■□□□□ 0.29
NECAB3-203ENST00000439478 ZNF543Q08ER8 600 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 CCDC178Q5BJE1 867 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 GPATCH4Q5T3I0 446 aaKnown RBP16.86■□□□□ 0.29
NECAB3-203ENST00000439478 RNF207Q6ZRF8 634 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 IQCA1Q86XH1 822 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 MORC4Q8TE76 937 aa16.86■□□□□ 0.29
NECAB3-203ENST00000439478 YTHDC1Q96MU7 727 aaKnown RBP16.86■□□□□ 0.29
NECAB3-203ENST00000439478 HIPK3Q9H422 1215 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms