RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 TOX2Q96NM4 488 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
CCDC66-207ENST00000439445 FEM1BQ9UK73 627 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 GREB1LQ9C091 1923 aaPredicted RBP11.72□□□□□ -0.53
CCDC66-207ENST00000439445 MYH4Q9Y623 1939 aa11.72□□□□□ -0.53
CCDC66-207ENST00000439445 ROBO3Q96MS0 1386 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 IGKV6D-41A0A0C4DH26 115 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.71□□□□□ -0.53
CCDC66-207ENST00000439445 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.71□□□□□ -0.53
CCDC66-207ENST00000439445 ZFYP08048 801 aaPredicted RBP11.71□□□□□ -0.53
CCDC66-207ENST00000439445 FOSL2P15408 326 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 GNAT2P19087 354 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 CCDC144BQ3MJ40 725 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 GNASQ5JWF2 1037 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 TSHZ3Q63HK5 1081 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 PCSK9Q8NBP7 692 aaKnown RBP11.71□□□□□ -0.53
CCDC66-207ENST00000439445 MKL1Q969V6 931 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 CEP95Q96GE4 821 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 GLT1D1Q96MS3 346 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 ABHD16BQ9H3Z7 469 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 SPC25Q9HBM1 224 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 SLC38A10Q9HBR0 1119 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 MTMR4Q9NYA4 1195 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 FBXO40Q9UH90 709 aa11.71□□□□□ -0.53
CCDC66-207ENST00000439445 ISY1Q9ULR0 285 aaKnown RBP11.71□□□□□ -0.53
CCDC66-207ENST00000439445 MYO9BQ13459 2157 aa11.71□□□□□ -0.54
CCDC66-207ENST00000439445 MCM3APO60318 1980 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 ELP1O95163 1332 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 MYADML2A6NDP7 307 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 PATL2C9JE40 543 aaKnown RBP11.7□□□□□ -0.54
CCDC66-207ENST00000439445 TTLL1O95922 423 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 TIMP1P01033 207 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 ASGR1P07306 291 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 TSPY3P0CV98 308 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 TSPY8P0CW00 308 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 LRRFIP1Q32MZ4 808 aaKnown RBP11.7□□□□□ -0.54
CCDC66-207ENST00000439445 SLFN13Q68D06 897 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 CCSAPQ6IQ19 270 aaPredicted RBP11.7□□□□□ -0.54
CCDC66-207ENST00000439445 IFNL3Q8IZI9 196 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 LRRC47Q8N1G4 583 aaKnown RBP11.7□□□□□ -0.54
CCDC66-207ENST00000439445 CHST13Q8NET6 341 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 DCTPP1Q9H773 170 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 EPB41L4AQ9HCS5 686 aaPredicted RBP11.7□□□□□ -0.54
CCDC66-207ENST00000439445 HOMER2Q9NSB8 354 aa11.7□□□□□ -0.54
CCDC66-207ENST00000439445 SPTBN5Q9NRC6 3674 aaKnown RBP11.7□□□□□ -0.54
CCDC66-207ENST00000439445 MROH7Q68CQ1 1323 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 TMEM265A0A087WTH1 108 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 TMEM232C9JQI7 657 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 M0R2C6 588 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 ADCY6O43306 1168 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 FDX1P10109 184 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 BMP3P12645 472 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 DNAJB2P25686 324 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 CDK7P50613 346 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 OAZ1P54368 228 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 GJA9P57773 515 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 PDE4BQ07343 736 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 MFSD5Q6N075 450 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 NOL8Q76FK4 1167 aaKnown RBP11.69□□□□□ -0.54
CCDC66-207ENST00000439445 ARMCX2Q7L311 632 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 CCDC144CPQ8IYA2 1237 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 GMCL1P1Q8NEA9 526 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 CHMP4CQ96CF2 233 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 FGD4Q96M96 766 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC66-207ENST00000439445 NACAP1Q9BZK3 213 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 TBX21Q9UL17 535 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 SYNPO2Q9UMS6 1093 aa11.69□□□□□ -0.54
CCDC66-207ENST00000439445 ARVCFO00192 962 aa11.68□□□□□ -0.54
CCDC66-207ENST00000439445 ARHGAP33O14559 1287 aa11.68□□□□□ -0.54
CCDC66-207ENST00000439445 SLC3A2P08195 630 aaKnown RBP11.68□□□□□ -0.54
CCDC66-207ENST00000439445 CST5P28325 142 aaPredicted RBP11.68□□□□□ -0.54
CCDC66-207ENST00000439445 TFAP4Q01664 338 aa11.68□□□□□ -0.54
CCDC66-207ENST00000439445 CNTN2Q02246 1040 aa11.68□□□□□ -0.54
CCDC66-207ENST00000439445 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
CCDC66-207ENST00000439445 PPIGQ13427 754 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC66-207ENST00000439445 GRIN2CQ14957 1233 aa11.68□□□□□ -0.54
CCDC66-207ENST00000439445 CCDC174Q6PII3 467 aa11.68□□□□□ -0.54
CCDC66-207ENST00000439445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC66-207ENST00000439445 NEDD1Q8NHV4 660 aa11.68□□□□□ -0.54
CCDC66-207ENST00000439445 CHURC1Q8WUH1 139 aa11.68□□□□□ -0.54
CCDC66-207ENST00000439445 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
CCDC66-207ENST00000439445 UPF3AQ9H1J1 476 aaKnown RBP11.68□□□□□ -0.54
CCDC66-207ENST00000439445 BDP1A6H8Y1 2624 aa11.68□□□□□ -0.54
CCDC66-207ENST00000439445 CHD7Q9P2D1 2997 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 A0A0U1RQG5 324 aaPredicted RBP11.67□□□□□ -0.54
CCDC66-207ENST00000439445 TLR3O15455 904 aaKnown RBP11.67□□□□□ -0.54
CCDC66-207ENST00000439445 CSF2RAP15509 400 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 MCCP23508 829 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 STAT2P52630 851 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 BEX3Q00994 111 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 TNFAIP2Q03169 654 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 CCDC129Q6ZRS4 1044 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 C16orf59Q7L2K0 433 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 FAM160B2Q86V87 743 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 TMEM199Q8N511 208 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 AGBL1Q96MI9 1066 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 PPP1R12CQ9BZL4 782 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 NAPBQ9H115 298 aa11.67□□□□□ -0.54
CCDC66-207ENST00000439445 ZNF576Q9H609 170 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms