RNA–Protein interactions for RNA: ENST00000439209.5

LRTOMT-208, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-208ENST00000439209 TOP1P11387 765 aaKnown RBP13.21□□□□□ -0.29
LRTOMT-208ENST00000439209 SDSP20132 328 aa13.21□□□□□ -0.29
LRTOMT-208ENST00000439209 SLC16A2P36021 539 aa13.21□□□□□ -0.29
LRTOMT-208ENST00000439209 GJA9P57773 515 aa13.21□□□□□ -0.29
LRTOMT-208ENST00000439209 FAAP100Q0VG06 881 aa13.21□□□□□ -0.29
LRTOMT-208ENST00000439209 ANKRD33Q7Z3H0 272 aa13.21□□□□□ -0.29
LRTOMT-208ENST00000439209 CYP39A1Q9NYL5 469 aa13.21□□□□□ -0.29
LRTOMT-208ENST00000439209 CCPG1Q9ULG6 757 aa13.21□□□□□ -0.29
LRTOMT-208ENST00000439209 NEDD4P46934 1319 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 ASB14A6NK59 587 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 CTAGE5O15320 804 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 RAG1P15918 1043 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 NUCB1Q02818 461 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 AKNAD1Q5T1N1 836 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 SYDE2Q5VT97 1194 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 BTNL9Q6UXG8 535 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 NSMFQ6X4W1 530 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 PCSK9Q8NBP7 692 aaKnown RBP13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 SLC17A8Q8NDX2 589 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 PURBQ96QR8 312 aaKnown RBP13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 OSBPL3Q9H4L5 887 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 SPC25Q9HBM1 224 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 GPCPD1Q9NPB8 672 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 TMEM39AQ9NV64 488 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 STXBP5LQ9Y2K9 1186 aa13.2□□□□□ -0.3
LRTOMT-208ENST00000439209 KIAA1217Q5T5P2 1943 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 ELP1O95163 1332 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 DCDC2CA8MYV0 355 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 PDHBP11177 359 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 PTGS1P23219 599 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 EPHB4P54760 987 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 MFAP1P55081 439 aaKnown RBP13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 BEX3Q00994 111 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 TNFAIP2Q03169 654 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 FAM109BQ6ICB4 259 aaPredicted RBP13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 MFSD6Q6ZSS7 791 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 FBXO16Q8IX29 292 aaPredicted RBP13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 FAM161BQ96MY7 647 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 GUCD1Q96NT3 240 aa13.19□□□□□ -0.3
LRTOMT-208ENST00000439209 MROH7Q68CQ1 1323 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 NFIBO00712 420 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 PCP11498 1178 aaKnown RBP13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 CDK7P50613 346 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 NKX3-2P78367 333 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 FPGSQ05932 587 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 ZNF697Q5TEC3 545 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 TAPT1Q6NXT6 567 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 EEPD1Q7L9B9 569 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 TLK2Q86UE8 772 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 ZKSCAN3Q9BRR0 538 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 TBX21Q9UL17 535 aa13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
LRTOMT-208ENST00000439209 ARVCFO00192 962 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 SNHG28P0DPA3 235 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 SMPD1P17405 629 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 ZNF543Q08ER8 600 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 BAATQ14032 418 aaPredicted RBP13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 TMEM63BQ5T3F8 832 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 NOL8Q76FK4 1167 aaKnown RBP13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 MORC4Q8TE76 937 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 ESR2Q92731 530 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 VTI1AQ96AJ9 217 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 RNPC3Q96LT9 517 aaKnown RBP13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 TTC14Q96N46 770 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 RNF41Q9H4P4 317 aaPredicted RBP13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 DIAPH3Q9NSV4 1193 aa13.17□□□□□ -0.3
LRTOMT-208ENST00000439209 PTPDC1A2A3K4 754 aa13.16□□□□□ -0.3
LRTOMT-208ENST00000439209 ZNF213O14771 459 aa13.16□□□□□ -0.3
LRTOMT-208ENST00000439209 TIMP1P01033 207 aa13.16□□□□□ -0.3
LRTOMT-208ENST00000439209 ALDH5A1P51649 535 aaPredicted RBP13.16□□□□□ -0.3
LRTOMT-208ENST00000439209 SMAD3P84022 425 aaKnown RBP13.16□□□□□ -0.3
LRTOMT-208ENST00000439209 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
LRTOMT-208ENST00000439209 FAM126BQ8IXS8 530 aa13.16□□□□□ -0.3
LRTOMT-208ENST00000439209 VTA1Q9NP79 307 aa13.16□□□□□ -0.3
LRTOMT-208ENST00000439209 TANC1Q9C0D5 1861 aa13.16□□□□□ -0.3
LRTOMT-208ENST00000439209 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 A0A0C4DFX4 3053 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 SCN10AQ9Y5Y9 1956 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 KDM4AO75164 1064 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 GOLGA8HP0CJ92 632 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 FSCN1Q16658 493 aaKnown RBP13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 MFSD5Q6N075 450 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 KIAA1211Q6ZU35 1233 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 CLEC4DQ8WXI8 215 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 AP5M1Q9H0R1 490 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 IL25Q9H293 177 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 TTYH1Q9H313 450 aaPredicted RBP13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 CPVLQ9H3G5 476 aa13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 ADD3Q9UEY8 706 aaKnown RBP13.15□□□□□ -0.3
LRTOMT-208ENST00000439209 WDR19Q8NEZ3 1342 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 MYH7BA7E2Y1 1941 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 B4E1Z4 1266 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 HIP1O00291 1037 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms