RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 TCRBV5S4A2TA0A5A2 114 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 FLOT1O75955 427 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 SLU7O95391 586 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 KRT13P13646 458 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 GRM4Q14833 912 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 UBE2SQ16763 222 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 NELFCDQ8IXH7 590 aa12.9□□□□□ -0.34
TRAPPC9-202ENST00000438773 GCOM1H8Y6P7 765 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 LAD1O00515 517 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 GRIN3BO60391 1043 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 GAS7O60861 476 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 RPN1P04843 607 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 POLR2MP0CAP2 368 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 SMYD4Q8IYR2 804 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 NEK11Q8NG66 645 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 ARHGEF35A5YM69 484 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 FOSP01100 380 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 MAEAQ7L5Y9 396 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 TPH2Q8IWU9 490 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 PNMA6FA0A0J9YX94 578 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 RPL13P26373 211 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 NOP2P46087 812 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 SLC15A2Q16348 729 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 SPECC1LQ69YQ0 1117 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 IQCEQ6IPM2 695 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 LRRC4BQ9NT99 713 aa12.89□□□□□ -0.35
TRAPPC9-202ENST00000438773 hCG_1984214I3L0E3 225 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 RGL2O15211 777 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 KRT9P35527 623 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 CCZ1BP86790 482 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 CCZ1P86791 482 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 DCAF17Q5H9S7 520 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 STRIP1Q5VSL9 837 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 RESP18Q5W5W9 173 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 ZNF713Q8N859 430 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 RSPH14Q9UHP6 348 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 GPR75-ASB3A0A0A6YYF3 556 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 CETN3O15182 167 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 EIF3JO75822 258 aaKnown RBP12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 CLEC10AQ8IUN9 316 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 DHX40Q8IX18 779 aaKnown RBP12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 DRC1Q96MC2 740 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 SH3GLB2Q9NR46 395 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 CCPG1Q9ULG6 757 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 B4DLN1 442 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 CDC37Q16543 378 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 CRACR2AQ9BSW2 395 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 COBLO75128 1261 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 RASA1P20936 1047 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 STAT2P52630 851 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 SNAP25P60880 206 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 SPATA1Q5VX52 437 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 AK8Q96MA6 479 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 MAN1B1Q9UKM7 699 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
TRAPPC9-202ENST00000438773 MYO3BQ8WXR4 1341 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 RHOXF2BP0C7M4 288 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 PAFAH1B1P43034 410 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 PPP4CP60510 307 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 DNAJC21Q5F1R6 531 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 SYDE2Q5VT97 1194 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 ARL6IP4Q66PJ3 421 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 GPBP1Q86WP2 473 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 SULF1Q8IWU6 871 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 RHOXF2Q9BQY4 288 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 OSBPL5Q9H0X9 879 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 JADE2Q9NQC1 790 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 SRGNP10124 158 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 UBXN2AP68543 259 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 SLFN12Q8IYM2 578 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 ALS2CR12Q96Q35 445 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 SLC39A2Q9NP94 309 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 FAM205CA6NFA0 338 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 MORC3Q14149 939 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 ERCC6LQ2NKX8 1250 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 CDC42EP5Q6NZY7 148 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 AS3MTQ9HBK9 375 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 GUCA1BQ9UMX6 200 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 CSADQ9Y600 493 aa12.87□□□□□ -0.35
TRAPPC9-202ENST00000438773 UBE2Q2LH0YL09 131 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 TROAPQ12815 778 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 BARHL2Q9NY43 387 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L10C9JJH3 530 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 IKBKBO14920 756 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 GCFC2P16383 781 aaKnown RBP12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 KRT83P78385 493 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 KIF5AQ12840 1032 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 DCPSQ96C86 337 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms