RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 WBP1LQ9NX94 342 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 FBXO40Q9UH90 709 aa12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
HLA-DMB-259ENST00000438510 hCG_1642624A0A1W2PR95 340 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 ALAS1P13196 640 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 XBP1P17861 261 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 MAPK4P31152 587 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 SLC4A3P48751 1232 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 POTEEQ6S8J3 1075 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 HEATR3Q7Z4Q2 680 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 NCAPG2Q86XI2 1143 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 FAM177A1Q8N128 213 aaPredicted RBP12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 FAM184AQ8NB25 1140 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 CHST13Q8NET6 341 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 CCDC148Q8NFR7 591 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 AGBL1Q96MI9 1066 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 MOV10L1Q9BXT6 1211 aaKnown RBP12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 RNF146Q9NTX7 359 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 SMC3Q9UQE7 1217 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 PCDHA1Q9Y5I3 950 aa12.18□□□□□ -0.46
HLA-DMB-259ENST00000438510 LCTP09848 1927 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 GPR25O00155 361 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 JAK2O60674 1132 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 PPP1R11O60927 126 aaPredicted RBP12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 PPFIA3O75145 1194 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 ERCC3P19447 782 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 NAPAP54920 295 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 SP3Q02447 781 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 KIF22Q14807 665 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 PKN1Q16512 942 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 WWC2Q6AWC2 1192 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 TEX2Q8IWB9 1127 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 GPKOWQ92917 476 aaPredicted RBP eCLIP12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 DDX11Q96FC9 970 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 TRERF1Q96PN7 1200 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 MAF1Q9H063 256 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 ACAD9Q9H845 621 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 SH3GLB2Q9NR46 395 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 TSHZ2Q9NRE2 1034 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 HOMER2Q9NSB8 354 aa12.17□□□□□ -0.46
HLA-DMB-259ENST00000438510 STXBP3O00186 592 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 PEX10O60683 326 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 GJB2P29033 226 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 TRIM29Q14134 588 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 Q3C1V9 767 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 WDR78Q5VTH9 848 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 MCF2L2Q86YR7 1114 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 COA7Q96BR5 231 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 GLT8D2Q9H1C3 349 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 PORCNQ9H237 461 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 R3HDMLQ9H3Y0 253 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 RIPK3Q9Y572 518 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 IVNS1ABPQ9Y6Y0 642 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 DOCK3Q8IZD9 2030 aa12.16□□□□□ -0.46
HLA-DMB-259ENST00000438510 PFASO15067 1338 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 ESYT2A0FGR8 921 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 STRNO43815 780 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 FKTNO75072 461 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 HSPA1AP0DMV8 641 aaKnown RBP12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 HSPA1BP0DMV9 641 aaKnown RBP12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 FDPSP14324 419 aaKnown RBP12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 GNA11P29992 359 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 FCGRTP55899 365 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 LACTBP83111 547 aaPredicted RBP12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 KCTD2Q14681 263 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 ARHGEF6Q15052 776 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 PLEKHH3Q7Z736 793 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 SAMD3Q8N6K7 520 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 CUL5Q93034 780 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 ERO1AQ96HE7 468 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 EFCC1Q9HA90 598 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 MAP3K20Q9NYL2 800 aaKnown RBP12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 VPS54Q9P1Q0 977 aa12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 DAXXQ9UER7 740 aaPredicted RBP12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
HLA-DMB-259ENST00000438510 PCNTO95613 3336 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 MYH15Q9Y2K3 1946 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 TNPO2O14787 897 aaKnown RBP12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 FCER1AP12319 257 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 PDCP20941 246 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 CALML3P27482 149 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 MRPL12P52815 198 aaKnown RBP12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 GALNT17Q6IS24 598 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 GPR142Q7Z601 462 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 ABRAQ8N0Z2 381 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 ANKRD35Q8N283 1001 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 RGS22Q8NE09 1264 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 BICD2Q8TD16 824 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 SOCS4Q8WXH5 440 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 CLEC4DQ8WXI8 215 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 C8orf76Q96K31 380 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 MMP19Q99542 508 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 ZMYND12Q9H0C1 365 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 BRMS1Q9HCU9 246 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms