RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ARHGAP25P42331 645 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 CYP27A1Q02318 531 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 CCDC174Q6PII3 467 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 GBP6Q6ZN66 633 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 BRIP1Q9BX63 1249 aa7.4□□□□□ -1.22
CSDE1-205ENST00000438362 ANKRD26Q9UPS8 1709 aa7.4□□□□□ -1.23
CSDE1-205ENST00000438362 CALUO43852 315 aaPredicted RBP7.4□□□□□ -1.23
CSDE1-205ENST00000438362 GUCY2FP51841 1108 aa7.4□□□□□ -1.23
CSDE1-205ENST00000438362 FAM26FQ5R3K3 315 aa7.4□□□□□ -1.23
CSDE1-205ENST00000438362 PEX26Q7Z412 305 aa7.4□□□□□ -1.23
CSDE1-205ENST00000438362 TC2NQ8N9U0 490 aa7.4□□□□□ -1.23
CSDE1-205ENST00000438362 NHEJ1Q9H9Q4 299 aaPredicted RBP7.4□□□□□ -1.23
CSDE1-205ENST00000438362 JRKLQ9Y4A0 524 aa7.4□□□□□ -1.23
CSDE1-205ENST00000438362 PARP3Q9Y6F1 533 aa7.4□□□□□ -1.23
CSDE1-205ENST00000438362 TMEM110-MUSTN1A8MSY1 372 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 LGALS16A8MUM7 142 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 KIF4AO95239 1232 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 MAN2A1Q16706 1144 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 MSL1Q68DK7 614 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 GGA1Q9UJY5 639 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 DNM3Q9UQ16 869 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 UTP11Q9Y3A2 253 aaKnown RBP7.39□□□□□ -1.23
CSDE1-205ENST00000438362 CSF1RP07333 972 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 TNFAIP3P21580 790 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 POLR2FP61218 127 aaKnown RBP7.39□□□□□ -1.23
CSDE1-205ENST00000438362 RASSF7Q02833 373 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 ZRSR2Q15696 482 aaKnown RBP7.39□□□□□ -1.23
CSDE1-205ENST00000438362 CEP57Q86XR8 500 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 LARP4BQ92615 738 aaKnown RBP7.39□□□□□ -1.23
CSDE1-205ENST00000438362 PLCD4Q9BRC7 762 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 TRIM31Q9BZY9 425 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 PCDHA12Q9UN75 941 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 FRMD4BQ9Y2L6 1034 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 ZNF804BA4D1E1 1349 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 KDM3AQ9Y4C1 1321 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 EZRP15311 586 aaKnown RBP7.39□□□□□ -1.23
CSDE1-205ENST00000438362 PLCG1P19174 1290 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 NF2P35240 595 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 PRCPP42785 496 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 CCT5P48643 541 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 ATP1A2P50993 1020 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 EPHB4P54760 987 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 NR1I3Q14994 352 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 USP49Q70CQ1 688 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 CABS1Q96KC9 395 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 UIMC1Q96RL1 719 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 SENP2Q9HC62 589 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 MTUS1Q9ULD2 1270 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 SLIT1O75093 1534 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 OVOS2A0A0G2JMS6 1433 aa7.39□□□□□ -1.23
CSDE1-205ENST00000438362 PNPLA7Q6ZV29 1317 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 ANKRD62A6NC57 917 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 KCNK3O14649 394 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 RIMBP2O15034 1052 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 ACTN4O43707 911 aaKnown RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 CYP2C19P33261 490 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 APBA1Q02410 837 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 GUCY2DQ02846 1103 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 C2orf54Q08AI8 447 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 CALCOCO2Q13137 446 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 MTMR3Q13615 1198 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 PTPAQ15257 358 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 CEP85LQ5SZL2 805 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 DAAM2Q86T65 1068 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 USP37Q86T82 979 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 GPBP1Q86WP2 473 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 DGKHQ86XP1 1220 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 SYCE1Q8N0S2 351 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 ZNF512BQ96KM6 892 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 CCDC77Q9BR77 488 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 SAMD15Q9P1V8 674 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 ARMCX3Q9UH62 379 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 TRIM49BA6NDI0 452 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 H2AFXP16104 143 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 EIF4A3P38919 411 aaKnown RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 SLC1A4P43007 532 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 FKBP3Q00688 224 aaKnown RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 PFKFB3Q16875 520 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 KRT71Q3SY84 523 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 TRAPPC3LQ5T215 181 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 CCDC25Q86WR0 208 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 REXO1L1PQ8IX06 675 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 MRPL44Q9H9J2 332 aaKnown RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 PANK4Q9NVE7 773 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 ADD3Q9UEY8 706 aaKnown RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 HPSEQ9Y251 543 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 TTC26A0AVF1 554 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 E7EVH7 732 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 XRCC5P13010 732 aaKnown RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 ATP2C1P98194 919 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 EHHADHQ08426 723 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 NCAPHQ15003 741 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 TBCKQ8TEA7 893 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 TBC1D22AQ8WUA7 517 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 STK17AQ9UEE5 414 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 MYO1CO00159 1063 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 USP17L8P0C7I0 530 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 LIG3P49916 1009 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 MECOMQ03112 1051 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 MFSD14BQ5SR56 506 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms