RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
CUBN-204ENST00000438254 KIF28PB7ZC32 967 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 RAD21O60216 631 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.62
CUBN-204ENST00000438254 HOXA7P31268 230 aaPredicted RBP11.18□□□□□ -0.62
CUBN-204ENST00000438254 FOSBP53539 338 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 TREML2Q5T2D2 321 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 GPAT2Q6NUI2 795 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 PPP1R18Q6NYC8 613 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 SAPCD2Q86UD0 394 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 HOMER1Q86YM7 354 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 PRPF38AQ8NAV1 312 aaKnown RBP11.18□□□□□ -0.62
CUBN-204ENST00000438254 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
CUBN-204ENST00000438254 DAGLBQ8NCG7 672 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 GPKOWQ92917 476 aaPredicted RBP eCLIP11.18□□□□□ -0.62
CUBN-204ENST00000438254 SLC10A4Q96EP9 437 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 SLF1Q9BQI6 1058 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 ZMYND12Q9H0C1 365 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 VAT1LQ9HCJ6 419 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 KCNJ14Q9UNX9 436 aa11.18□□□□□ -0.62
CUBN-204ENST00000438254 H3BQV1 296 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 PPP1R37O75864 691 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 ZBTB48P10074 688 aaPredicted RBP11.17□□□□□ -0.62
CUBN-204ENST00000438254 FOXK1P85037 733 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 SPRYD7Q5W111 196 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 LBX2Q6XYB7 198 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 OXER1Q8TDS5 423 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 PIBF1Q8WXW3 757 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 FOXP1Q9H334 677 aaPredicted RBP11.17□□□□□ -0.62
CUBN-204ENST00000438254 ZSCAN16Q9H4T2 348 aaPredicted RBP11.17□□□□□ -0.62
CUBN-204ENST00000438254 SLC38A10Q9HBR0 1119 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 TMOD4Q9NZQ9 345 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 SEC63Q9UGP8 760 aaKnown RBP11.17□□□□□ -0.62
CUBN-204ENST00000438254 AGTPBP1Q9UPW5 1226 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 TLL2Q9Y6L7 1015 aa11.17□□□□□ -0.62
CUBN-204ENST00000438254 MYH15Q9Y2K3 1946 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 TESPA1A2RU30 521 aaPredicted RBP11.16□□□□□ -0.62
CUBN-204ENST00000438254 SPDYE16A6NNV3 312 aaPredicted RBP11.16□□□□□ -0.62
CUBN-204ENST00000438254 BTBD18B2RXH4 712 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 USP17L15C9J2P7 530 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 USP17L13C9JLJ4 530 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 USP17L11C9JVI0 530 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 USP17L18D6R9N7 530 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 USP17L22D6RA61 530 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 USP17L17D6RBQ6 530 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 USP17L19D6RCP7 530 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 USP17L20D6RJB6 530 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 OPLAHO14841 1288 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 FDX1P10109 184 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 XBP1P17861 261 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 YY1P25490 414 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 SNAP25P60880 206 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 USP17L24Q0WX57 530 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 FSTL1Q12841 308 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 SNAPC2Q13487 334 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 COG2Q14746 738 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 GALNT17Q6IS24 598 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 HEATR3Q7Z4Q2 680 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 FERMT3Q86UX7 667 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 RASAL3Q86YV0 1011 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 DIS3L2Q8IYB7 885 aaKnown RBP11.16□□□□□ -0.62
CUBN-204ENST00000438254 KIFC2Q96AC6 838 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 COA7Q96BR5 231 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 HHIPL1Q96JK4 782 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 AMNQ9BXJ7 453 aa11.16□□□□□ -0.62
CUBN-204ENST00000438254 VWA5AO00534 786 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 ATP2A1O14983 1001 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 FLOT1O75955 427 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 BAG4O95429 457 aaKnown RBP11.15□□□□□ -0.62
CUBN-204ENST00000438254 ICAM1P05362 532 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 CALML3P27482 149 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 CLK2P49760 499 aaKnown RBP11.15□□□□□ -0.62
CUBN-204ENST00000438254 HUNKP57058 714 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 GHRHRQ02643 423 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 NR5A1Q13285 461 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 TRIM29Q14134 588 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 EARS2Q5JPH6 523 aaKnown RBP11.15□□□□□ -0.62
CUBN-204ENST00000438254 FOXD4L5Q5VV16 416 aaPredicted RBP11.15□□□□□ -0.62
CUBN-204ENST00000438254 DMRTA1Q5VZB9 504 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 FAM173BQ6P4H8 233 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 FASTKD5Q7L8L6 764 aaKnown RBP11.15□□□□□ -0.62
CUBN-204ENST00000438254 BRAPQ7Z569 592 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 FBXO11Q86XK2 927 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 CCDC148Q8NFR7 591 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 FOXD4L4Q8WXT5 416 aaPredicted RBP11.15□□□□□ -0.62
CUBN-204ENST00000438254 ATG4CQ96DT6 458 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 CHAMP1Q96JM3 812 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 TANGO6Q9C0B7 1094 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 ZNF214Q9UL59 606 aaPredicted RBP11.15□□□□□ -0.62
CUBN-204ENST00000438254 PCDHA4Q9UN74 947 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 SLC45A1Q9Y2W3 748 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 PCDHA1Q9Y5I3 950 aa11.15□□□□□ -0.62
CUBN-204ENST00000438254 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 COL11A1P12107 1806 aaPredicted RBP11.14□□□□□ -0.63
CUBN-204ENST00000438254 SMCO2A6NFE2 343 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 FAM155AB1AL88 458 aaPredicted RBP11.14□□□□□ -0.63
CUBN-204ENST00000438254 SLC10A3P09131 477 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 TAL1P17542 331 aaPredicted RBP11.14□□□□□ -0.63
CUBN-204ENST00000438254 KRT2P35908 639 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms