RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 CCDC184Q52MB2 194 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 TMEM63BQ5T3F8 832 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 SNRNP48Q6IEG0 339 aaKnown RBP11.13□□□□□ -0.63
RPE-210ENST00000438204 BMP8AQ7Z5Y6 402 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 TTC6Q86TZ1 520 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 SIAH1Q8IUQ4 282 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 CCDC144CPQ8IYA2 1237 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 EDAQ92838 391 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 TGS1Q96RS0 853 aaKnown RBP11.13□□□□□ -0.63
RPE-210ENST00000438204 PRRX2Q99811 253 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 ZBED2Q9BTP6 218 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 UPF3BQ9BZI7 483 aaKnown RBP11.13□□□□□ -0.63
RPE-210ENST00000438204 TLR9Q9NR96 1032 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 PPP1R9AQ9ULJ8 1098 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
RPE-210ENST00000438204 PTPRCP08575 1304 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 PRR23AA6NEV1 266 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 AKR1B1P15121 316 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 COPB2P35606 906 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 ICA1Q05084 483 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 TCTN1Q2MV58 587 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 TCEAL5Q5H9L2 206 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 FAM117BQ6P1L5 589 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 TRIM67Q6ZTA4 783 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 ZNF467Q7Z7K2 595 aaPredicted RBP11.12□□□□□ -0.63
RPE-210ENST00000438204 WDR63Q8IWG1 891 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 FBXL6Q8N531 539 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.12□□□□□ -0.63
RPE-210ENST00000438204 C17orf80Q9BSJ5 609 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 DNAH14Q0VDD8 3507 aa11.12□□□□□ -0.63
RPE-210ENST00000438204 DYNC1LI2O43237 492 aaPredicted RBP11.11□□□□□ -0.63
RPE-210ENST00000438204 IQCF3P0C7M6 154 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 UQCRFS1P1P0C7P4 283 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 CYP2D6P10635 497 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 ZAP70P43403 619 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 FAM83BQ5T0W9 1011 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 TMEM179Q6ZVK1 233 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 PABPC5Q96DU9 382 aaKnown RBP11.11□□□□□ -0.63
RPE-210ENST00000438204 ARHGEF10LQ9HCE6 1279 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 CLDND1Q9NY35 253 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 FAM50BQ9Y247 325 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 TMX2Q9Y320 296 aa11.11□□□□□ -0.63
RPE-210ENST00000438204 RAD21O60216 631 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 BAIAP3O94812 1187 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 POLR3DP05423 398 aaPredicted RBP11.1□□□□□ -0.63
RPE-210ENST00000438204 SMPD1P17405 629 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 RFC2P35250 354 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 CNTN2Q02246 1040 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 SMAD2Q15796 467 aaKnown RBP11.1□□□□□ -0.63
RPE-210ENST00000438204 TIGD5Q53EQ6 642 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 FAM47CQ5HY64 1035 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 TTC39AQ5SRH9 613 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 RPAINQ86UA6 219 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 MAGEB6Q8N7X4 407 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 MRPL38Q96DV4 380 aaKnown RBP11.1□□□□□ -0.63
RPE-210ENST00000438204 NUP88Q99567 741 aaPredicted RBP11.1□□□□□ -0.63
RPE-210ENST00000438204 FSD1Q9BTV5 496 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 TEX13BQ9BXU2 312 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 AP5M1Q9H0R1 490 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 PDGFCQ9NRA1 345 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 TRPC6Q9Y210 931 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 RALGAPA2Q2PPJ7 1873 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 ACACBO00763 2458 aa11.1□□□□□ -0.63
RPE-210ENST00000438204 GREB1LQ9C091 1923 aaPredicted RBP11.09□□□□□ -0.63
RPE-210ENST00000438204 MYH4Q9Y623 1939 aa11.09□□□□□ -0.63
RPE-210ENST00000438204 MAP1BP46821 2468 aaKnown RBP11.09□□□□□ -0.63
RPE-210ENST00000438204 IDH1O75874 414 aaKnown RBP11.09□□□□□ -0.63
RPE-210ENST00000438204 GJB5O95377 273 aa11.09□□□□□ -0.63
RPE-210ENST00000438204 SUPT20HL2P0C7V6 817 aa11.09□□□□□ -0.63
RPE-210ENST00000438204 LTBRP36941 435 aa11.09□□□□□ -0.63
RPE-210ENST00000438204 DLX2Q07687 328 aaPredicted RBP11.09□□□□□ -0.63
RPE-210ENST00000438204 FBXO16Q8IX29 292 aaPredicted RBP11.09□□□□□ -0.63
RPE-210ENST00000438204 CPXCR1Q8N123 301 aa11.09□□□□□ -0.63
RPE-210ENST00000438204 BANK1Q8NDB2 785 aa11.09□□□□□ -0.63
RPE-210ENST00000438204 DYNLL2Q96FJ2 89 aa11.09□□□□□ -0.63
RPE-210ENST00000438204 CRBNQ96SW2 442 aa11.09□□□□□ -0.63
RPE-210ENST00000438204 DBNDD2Q9BQY9 259 aa11.09□□□□□ -0.63
RPE-210ENST00000438204 CFAP47Q6ZTR5 3102 aa11.09□□□□□ -0.63
RPE-210ENST00000438204 PROB1E7EW31 1015 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 MBTPS2O43462 519 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 ZEB2O60315 1214 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 KDM4AO75164 1064 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 ZXDAP98168 799 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 GPNMBQ14956 572 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 COL19A1Q14993 1142 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 EEPD1Q7L9B9 569 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 ANKRD35Q8N283 1001 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 CNTNAP3BQ96NU0 1288 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 POP1Q99575 1024 aaKnown RBP11.08□□□□□ -0.64
RPE-210ENST00000438204 RAD9AQ99638 391 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 MEIS3Q99687 375 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 SEZ6LQ9BYH1 1024 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 CNTNAP3Q9BZ76 1288 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 SH2D4AQ9H788 454 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 EP300Q09472 2414 aaPredicted RBP11.08□□□□□ -0.64
RPE-210ENST00000438204 SPTBN2O15020 2390 aa11.08□□□□□ -0.64
RPE-210ENST00000438204 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
RPE-210ENST00000438204 SRGAP3O43295 1099 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms